RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 GAGE12GP0CL81 117 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 GAGE12IP0CL82 117 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 MAPKAPK5-AS1Q8N8E1 139 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 CHCHD7Q9BUK0 85 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 IGLV4-3A0A075B6K6 122 aa6.85□□□□□ -1.31
TRIM55-201ENST00000276573 ZNRF2Q8NHG8 242 aa6.85□□□□□ -1.31
TRIM55-201ENST00000276573 PHLDA1Q8WV24 401 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-201ENST00000276573 HIGD1BQ9P298 99 aa6.85□□□□□ -1.31
TRIM55-201ENST00000276573 TRBV7-3A0A075B6L6 115 aa6.84□□□□□ -1.31
TRIM55-201ENST00000276573 TRAV8-6A0A0B4J262 113 aa6.84□□□□□ -1.31
TRIM55-201ENST00000276573 IGHV3-38A0A0C4DH36 116 aa6.84□□□□□ -1.31
TRIM55-201ENST00000276573 TRBV10-1A0A0K0K1A3 114 aa6.84□□□□□ -1.31
TRIM55-201ENST00000276573 C11orf86A6NJI1 115 aa6.84□□□□□ -1.31
TRIM55-201ENST00000276573 CIDEAO60543 219 aa6.84□□□□□ -1.31
TRIM55-201ENST00000276573 COTL1Q14019 142 aa6.84□□□□□ -1.31
TRIM55-201ENST00000276573 VCX2Q9H322 139 aa6.84□□□□□ -1.31
TRIM55-201ENST00000276573 E9PLD3 99 aa6.84□□□□□ -1.32
TRIM55-201ENST00000276573 K7EQD1 137 aa6.84□□□□□ -1.32
TRIM55-201ENST00000276573 EMP1P54849 157 aa6.84□□□□□ -1.32
TRIM55-201ENST00000276573 RPL36AP83881 106 aaKnown RBP6.84□□□□□ -1.32
TRIM55-201ENST00000276573 SLC25A29Q8N8R3 303 aa6.84□□□□□ -1.32
TRIM55-201ENST00000276573 RPL36ALQ969Q0 106 aaKnown RBP6.84□□□□□ -1.32
TRIM55-201ENST00000276573 FAM104AQ969W3 186 aa6.84□□□□□ -1.32
TRIM55-201ENST00000276573 ZMAT5Q9UDW3 170 aaKnown RBP6.84□□□□□ -1.32
TRIM55-201ENST00000276573 TRBV25-1A0A075B6N4 114 aa6.83□□□□□ -1.32
TRIM55-201ENST00000276573 TRGV2A0A075B6R0 118 aa6.83□□□□□ -1.32
TRIM55-201ENST00000276573 NPSP0C0P6 89 aa6.83□□□□□ -1.32
TRIM55-201ENST00000276573 CRYBA4P53673 196 aa6.83□□□□□ -1.32
TRIM55-201ENST00000276573 HSD52Q0P140 79 aa6.83□□□□□ -1.32
TRIM55-201ENST00000276573 NFE4Q86UQ8 179 aa6.83□□□□□ -1.32
TRIM55-201ENST00000276573 OR11H2Q8NH07 326 aa6.83□□□□□ -1.32
TRIM55-201ENST00000276573 AMELXQ99217 191 aa6.83□□□□□ -1.32
TRIM55-201ENST00000276573 MAST4O15021 2626 aa6.83□□□□□ -1.32
TRIM55-201ENST00000276573 WIPF1O43516 503 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 ZNF25P17030 456 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-201ENST00000276573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-201ENST00000276573 IGKV2-29A2NJV5 120 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-201ENST00000276573 SMIM9A6NGZ8 99 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 UBE2D3P61077 147 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 UBE2D2P62837 147 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 CEMP1Q6PRD7 247 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-201ENST00000276573 KIR2DL5BQ8NHK3 375 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 ORAOV1Q8WV07 137 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 PRADC1Q9BSG0 188 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 SPANXA1Q9NS26 97 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 X6R8D5 127 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 JMJD1CQ15652 2540 aa6.82□□□□□ -1.32
TRIM55-201ENST00000276573 MYMXA0A1B0GTQ4 84 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 TRBV6-4A0A1B0GX49 114 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 GAGE12JA6NER3 117 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 HERVK_113P61574 105 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 SEC11AP67812 179 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 GAGE1Q13065 139 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 GAGE4Q13068 117 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 GAGE5Q13069 117 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 FHL2Q14192 279 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 GAGE13Q4V321 117 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 TMEM170BQ5T4T1 132 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 DAZ4Q86SG3 579 aaKnown RBP6.81□□□□□ -1.32
TRIM55-201ENST00000276573 CHAC1Q9BUX1 264 aa6.81□□□□□ -1.32
TRIM55-201ENST00000276573 DAZ3Q9NR90 486 aaKnown RBP6.81□□□□□ -1.32
TRIM55-201ENST00000276573 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 A0A0J9YXV3 536 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 TAX1BP3O14907 124 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 KRTAP24-1Q3LI83 254 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 Q6ZVH6 145 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 LINC00612Q8N6U2 182 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 TIMM21Q9BVV7 248 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 COX11Q9Y6N1 276 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 TENM1Q9UKZ4 2725 aa6.8□□□□□ -1.32
TRIM55-201ENST00000276573 ZNF22P17026 224 aaPredicted RBP6.79□□□□□ -1.32
TRIM55-201ENST00000276573 APOC4P55056 127 aa6.79□□□□□ -1.32
TRIM55-201ENST00000276573 MRPS36P82909 103 aaKnown RBP6.79□□□□□ -1.32
TRIM55-201ENST00000276573 VWFP04275 2813 aa6.79□□□□□ -1.32
TRIM55-201ENST00000276573 TEP1Q99973 2627 aaKnown RBP6.79□□□□□ -1.32
TRIM55-201ENST00000276573 LOC100131303A0A0U1RQF7 123 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 TMEM223A0PJW6 202 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 A6NDN8 102 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 DEFB130BP0DP73 79 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 DEFB130AP0DP74 79 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 TAL2Q16559 108 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 RNASE13Q5GAN3 156 aaKnown RBP6.78□□□□□ -1.32
TRIM55-201ENST00000276573 SBSPONQ8IVN8 264 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 GTSF1LQ9H1H1 148 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 F8P00451 2351 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 ZNF815PA8K554 130 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 Q6ZUT4 128 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 TM2D2Q9BX73 214 aa6.78□□□□□ -1.32
TRIM55-201ENST00000276573 LEPROTO15243 131 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 LINC00694P0DN24 101 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 GCSHP23434 173 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 DEFB135Q30KP9 77 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 DGAT2L7PQ6IED9 249 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 CEND1Q8N111 149 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 TINCRA0A1B0GVN0 87 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 CYSRT1A8MQ03 144 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 H3BRM9 83 aa6.77□□□□□ -1.33
TRIM55-201ENST00000276573 J3QQQ9 107 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms