RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 M0R1W7 72 aa11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 MAP1AP78559 2803 aaPredicted RBP11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 TMEM61Q8N0U2 210 aa11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 C22orf24Q9Y442 160 aa11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 NACAE9PAV3 2078 aa11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 CLPSL1A2RUU4 121 aa11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 SDHAF1A6NFY7 115 aa11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 IGHV3-30-3P0DP02 117 aa11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 NDPQ00604 133 aa11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 LINC00336Q6ZUF6 198 aa11.64□□□□□ -0.55
CTDSP1-201ENST00000273062 POLR2KP53803 58 aaKnown RBP11.63□□□□□ -0.55
CTDSP1-201ENST00000273062 BPESC1Q9GZL8 116 aa11.63□□□□□ -0.55
CTDSP1-201ENST00000273062 UTP20O75691 2785 aaKnown RBP11.63□□□□□ -0.55
CTDSP1-201ENST00000273062 GNRH2O43555 120 aa11.63□□□□□ -0.55
CTDSP1-201ENST00000273062 TIRAPP58753 221 aa11.63□□□□□ -0.55
CTDSP1-201ENST00000273062 LINC00315P59091 139 aa11.62□□□□□ -0.55
CTDSP1-201ENST00000273062 RPL18AQ02543 176 aaKnown RBP11.62□□□□□ -0.55
CTDSP1-201ENST00000273062 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
CTDSP1-201ENST00000273062 MUC4Q99102 2169 aa11.62□□□□□ -0.55
CTDSP1-201ENST00000273062 ACACBO00763 2458 aa11.62□□□□□ -0.55
CTDSP1-201ENST00000273062 IGKV3D-7A0A0C4DH55 119 aa11.61□□□□□ -0.55
CTDSP1-201ENST00000273062 A0A0J9YX75 114 aa11.61□□□□□ -0.55
CTDSP1-201ENST00000273062 BUB3O43684 328 aa11.61□□□□□ -0.55
CTDSP1-201ENST00000273062 NPBQ8NG41 125 aa11.61□□□□□ -0.55
CTDSP1-201ENST00000273062 RNF5Q99942 180 aa11.61□□□□□ -0.55
CTDSP1-201ENST00000273062 IGHV3OR16-10A0A075B7F0 116 aa11.61□□□□□ -0.55
CTDSP1-201ENST00000273062 A0A087WWL8 130 aa11.61□□□□□ -0.55
CTDSP1-201ENST00000273062 NXPH4O95158 308 aa11.6□□□□□ -0.55
CTDSP1-201ENST00000273062 SIRPDQ9H106 197 aa11.6□□□□□ -0.55
CTDSP1-201ENST00000273062 USP9XQ93008 2570 aaPredicted RBP11.6□□□□□ -0.55
CTDSP1-201ENST00000273062 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
CTDSP1-201ENST00000273062 SPANXDQ9BXN6 97 aa11.6□□□□□ -0.55
CTDSP1-201ENST00000273062 SPG11Q96JI7 2443 aa11.6□□□□□ -0.55
CTDSP1-201ENST00000273062 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 C1orf43Q9BWL3 253 aa11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 PKIGQ9Y2B9 76 aa11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 ZFYVE26Q68DK2 2539 aa11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 FHL2Q14192 279 aa11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 MIAQ16674 131 aa11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 SERP2Q8N6R1 65 aa11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 SPANXCQ9NY87 97 aa11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 KIF25-AS1Q9Y6Z4 181 aa11.59□□□□□ -0.55
CTDSP1-201ENST00000273062 ABCA2Q9BZC7 2435 aa11.58□□□□□ -0.56
CTDSP1-201ENST00000273062 CRYBG3Q68DQ2 2970 aa11.58□□□□□ -0.56
CTDSP1-201ENST00000273062 LMO4P61968 165 aa11.58□□□□□ -0.56
CTDSP1-201ENST00000273062 MALP21145 153 aa11.57□□□□□ -0.56
CTDSP1-201ENST00000273062 PFN2P35080 140 aa11.57□□□□□ -0.56
CTDSP1-201ENST00000273062 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
CTDSP1-201ENST00000273062 C20orf173Q96LM9 149 aa11.57□□□□□ -0.56
CTDSP1-201ENST00000273062 CELSR2Q9HCU4 2923 aa11.57□□□□□ -0.56
CTDSP1-201ENST00000273062 Q8N2B8 174 aa11.57□□□□□ -0.56
CTDSP1-201ENST00000273062 Q8N6K4 173 aa11.57□□□□□ -0.56
CTDSP1-201ENST00000273062 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
CTDSP1-201ENST00000273062 NDUFA12Q9UI09 145 aa11.57□□□□□ -0.56
CTDSP1-201ENST00000273062 VCYO14598 125 aa11.56□□□□□ -0.56
CTDSP1-201ENST00000273062 F5H697 171 aa11.56□□□□□ -0.56
CTDSP1-201ENST00000273062 F8WDY8 70 aa11.56□□□□□ -0.56
CTDSP1-201ENST00000273062 BEAN1Q3B7T3 259 aa11.56□□□□□ -0.56
CTDSP1-201ENST00000273062 RNASE13Q5GAN3 156 aaKnown RBP11.56□□□□□ -0.56
CTDSP1-201ENST00000273062 LINC01561Q8N1V8 128 aa11.56□□□□□ -0.56
CTDSP1-201ENST00000273062 PRO0628Q9UI54 55 aa11.56□□□□□ -0.56
CTDSP1-201ENST00000273062 SAA4P35542 130 aa11.56□□□□□ -0.56
CTDSP1-201ENST00000273062 IGHV4OR15-8A0A075B7B6 117 aa11.55□□□□□ -0.56
CTDSP1-201ENST00000273062 A0A087WW49 117 aa11.55□□□□□ -0.56
CTDSP1-201ENST00000273062 TINCRA0A1B0GVN0 87 aa11.55□□□□□ -0.56
CTDSP1-201ENST00000273062 BAALC-AS2P0C853 105 aa11.55□□□□□ -0.56
CTDSP1-201ENST00000273062 C9orf129Q5T035 196 aaKnown RBP11.55□□□□□ -0.56
CTDSP1-201ENST00000273062 FAM223AQ8IWN6 122 aa11.55□□□□□ -0.56
CTDSP1-201ENST00000273062 FAM218AQ96MZ4 157 aa11.55□□□□□ -0.56
CTDSP1-201ENST00000273062 PPP1R17O96001 155 aa11.55□□□□□ -0.56
CTDSP1-201ENST00000273062 EDN2P20800 178 aa11.55□□□□□ -0.56
CTDSP1-201ENST00000273062 IGHV7-81A0A0B4J1V7 117 aa11.54□□□□□ -0.56
CTDSP1-201ENST00000273062 MYO18BQ8IUG5 2567 aa11.54□□□□□ -0.56
CTDSP1-201ENST00000273062 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
CTDSP1-201ENST00000273062 SYNJ2BPP57105 145 aa11.54□□□□□ -0.56
CTDSP1-201ENST00000273062 Q8N9W7 124 aa11.54□□□□□ -0.56
CTDSP1-201ENST00000273062 IGHV1-69P01742 117 aa11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 RNASE4P34096 147 aaKnown RBP11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 MINOS1Q5TGZ0 78 aa11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 FAM74A4Q5TZK3 123 aa11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 MINOS1-NBL1R4GNA1 71 aa11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 DOPEY1Q5JWR5 2465 aa11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 TRBV27A0A0K0K1C4 114 aa11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 USP17L23D6RBM5 183 aa11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 COX7A2LO14548 114 aa11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 Q9HAA7 133 aa11.53□□□□□ -0.56
CTDSP1-201ENST00000273062 FAM223BA6NKX1 122 aa11.52□□□□□ -0.57
CTDSP1-201ENST00000273062 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
CTDSP1-201ENST00000273062 ECSCRQ19T08 205 aa11.52□□□□□ -0.57
CTDSP1-201ENST00000273062 USP24Q9UPU5 2620 aa11.52□□□□□ -0.57
CTDSP1-201ENST00000273062 TRAV21A0A0B4J279 112 aa11.51□□□□□ -0.57
CTDSP1-201ENST00000273062 A0A0U1RRA0 63 aa11.51□□□□□ -0.57
CTDSP1-201ENST00000273062 F6UB75 175 aa11.51□□□□□ -0.57
CTDSP1-201ENST00000273062 FAM104AQ969W3 186 aa11.51□□□□□ -0.57
CTDSP1-201ENST00000273062 IGHV4-61A0A0C4DH41 118 aa11.5□□□□□ -0.57
CTDSP1-201ENST00000273062 AVPP01185 164 aa11.5□□□□□ -0.57
CTDSP1-201ENST00000273062 C9orf139Q6ZV77 190 aa11.5□□□□□ -0.57
CTDSP1-201ENST00000273062 C16orf92Q96LL3 132 aa11.5□□□□□ -0.57
CTDSP1-201ENST00000273062 PRB1P04280 392 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms