RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 VWFP04275 2813 aa14.84□□□□□ -0.03
LYSMD2-201ENST00000267838 SHISA2Q6UWI4 295 aa14.84□□□□□ -0.03
LYSMD2-201ENST00000267838 CHTOPQ9Y3Y2 248 aaKnown RBP14.84□□□□□ -0.03
LYSMD2-201ENST00000267838 RPL32P62910 135 aaKnown RBP14.83□□□□□ -0.03
LYSMD2-201ENST00000267838 CFAP126Q5VTH2 177 aa14.83□□□□□ -0.03
LYSMD2-201ENST00000267838 FBN1P35555 2871 aaKnown RBP14.83□□□□□ -0.04
LYSMD2-201ENST00000267838 TRBV6-5A0A0K0K1A5 114 aa14.83□□□□□ -0.04
LYSMD2-201ENST00000267838 TTTY13Q9BZ97 58 aa14.83□□□□□ -0.04
LYSMD2-201ENST00000267838 IGHV3-73A0A0B4J1V6 119 aa14.82□□□□□ -0.04
LYSMD2-201ENST00000267838 C16orf74Q96GX8 76 aa14.82□□□□□ -0.04
LYSMD2-201ENST00000267838 RS1O15537 224 aa14.81□□□□□ -0.04
LYSMD2-201ENST00000267838 POLR2KP53803 58 aaKnown RBP14.81□□□□□ -0.04
LYSMD2-201ENST00000267838 C21orf62-AS1Q17RA5 79 aa14.81□□□□□ -0.04
LYSMD2-201ENST00000267838 NEXN-AS1Q8NBZ9 246 aa14.81□□□□□ -0.04
LYSMD2-201ENST00000267838 EDA2RQ9HAV5 297 aa14.81□□□□□ -0.04
LYSMD2-201ENST00000267838 RRN3P1Q2M238 152 aa14.8□□□□□ -0.04
LYSMD2-201ENST00000267838 OR11H2Q8NH07 326 aa14.8□□□□□ -0.04
LYSMD2-201ENST00000267838 NAA38Q9BRA0 125 aaKnown RBP14.8□□□□□ -0.04
LYSMD2-201ENST00000267838 TRGV1A0A0A0MS02 117 aa14.8□□□□□ -0.04
LYSMD2-201ENST00000267838 RHODO00212 210 aa14.8□□□□□ -0.04
LYSMD2-201ENST00000267838 C2orf66Q6UXQ4 117 aa14.8□□□□□ -0.04
LYSMD2-201ENST00000267838 NOTCH3Q9UM47 2321 aa14.8□□□□□ -0.04
LYSMD2-201ENST00000267838 NACAE9PAV3 2078 aa14.79□□□□□ -0.04
LYSMD2-201ENST00000267838 SDHAF1A6NFY7 115 aa14.79□□□□□ -0.04
LYSMD2-201ENST00000267838 NEGR1Q7Z3B1 354 aa14.79□□□□□ -0.04
LYSMD2-201ENST00000267838 PHLDA1Q8WV24 401 aaPredicted RBP14.79□□□□□ -0.04
LYSMD2-201ENST00000267838 PLAC8L1A1L4L8 177 aa14.78□□□□□ -0.04
LYSMD2-201ENST00000267838 VCYO14598 125 aa14.78□□□□□ -0.04
LYSMD2-201ENST00000267838 DAZ2Q13117 558 aaKnown RBP14.78□□□□□ -0.04
LYSMD2-201ENST00000267838 MAPKAPK5-AS1Q8N8E1 139 aa14.78□□□□□ -0.04
LYSMD2-201ENST00000267838 NHP2Q9NX24 153 aaKnown RBP14.78□□□□□ -0.04
LYSMD2-201ENST00000267838 MYMXA0A1B0GTQ4 84 aa14.78□□□□□ -0.04
LYSMD2-201ENST00000267838 BAALCQ8WXS3 180 aa14.78□□□□□ -0.04
LYSMD2-201ENST00000267838 NOP10Q9NPE3 64 aaKnown RBP14.78□□□□□ -0.04
LYSMD2-201ENST00000267838 Q6ZTI0 123 aa14.77□□□□□ -0.05
LYSMD2-201ENST00000267838 TRBV27A0A0K0K1C4 114 aa14.76□□□□□ -0.05
LYSMD2-201ENST00000267838 ZFP2Q6ZN57 461 aa14.76□□□□□ -0.05
LYSMD2-201ENST00000267838 HIST1H4GQ99525 98 aa14.76□□□□□ -0.05
LYSMD2-201ENST00000267838 E9PLD3 99 aa14.75□□□□□ -0.05
LYSMD2-201ENST00000267838 PAPPA-AS1Q5QFB9 102 aa14.75□□□□□ -0.05
LYSMD2-201ENST00000267838 Q6ZSN1 163 aa14.75□□□□□ -0.05
LYSMD2-201ENST00000267838 KIR2DL4Q99706 377 aa14.75□□□□□ -0.05
LYSMD2-201ENST00000267838 CYSLTR1Q9Y271 337 aa14.75□□□□□ -0.05
LYSMD2-201ENST00000267838 COTL1Q14019 142 aa14.75□□□□□ -0.05
LYSMD2-201ENST00000267838 KIR2DL5BQ8NHK3 375 aa14.75□□□□□ -0.05
LYSMD2-201ENST00000267838 K7ERJ3 54 aa14.74□□□□□ -0.05
LYSMD2-201ENST00000267838 IGHV3-53P01767 116 aa14.74□□□□□ -0.05
LYSMD2-201ENST00000267838 P0DMU3 169 aa14.74□□□□□ -0.05
LYSMD2-201ENST00000267838 FAM231AP0DMU4 169 aa14.74□□□□□ -0.05
LYSMD2-201ENST00000267838 FAM231CP0DMU5 169 aa14.74□□□□□ -0.05
LYSMD2-201ENST00000267838 OXLD1Q5BKU9 147 aa14.74□□□□□ -0.05
LYSMD2-201ENST00000267838 OVOL2Q9BRP0 275 aa14.74□□□□□ -0.05
LYSMD2-201ENST00000267838 TRBV7-3A0A075B6L6 115 aa14.73□□□□□ -0.05
LYSMD2-201ENST00000267838 G3V4G9 280 aa14.73□□□□□ -0.05
LYSMD2-201ENST00000267838 APOC4P55056 127 aa14.73□□□□□ -0.05
LYSMD2-201ENST00000267838 PRSS29PA6NIE9 313 aa14.73□□□□□ -0.05
LYSMD2-201ENST00000267838 IGLL5B9A064 214 aa14.73□□□□□ -0.05
LYSMD2-201ENST00000267838 C12orf74Q32Q52 190 aa14.73□□□□□ -0.05
LYSMD2-201ENST00000267838 STAB1Q9NY15 2570 aa14.72□□□□□ -0.05
LYSMD2-201ENST00000267838 COL6A5A8TX70 2615 aa14.72□□□□□ -0.05
LYSMD2-201ENST00000267838 TRRAPQ9Y4A5 3859 aa14.72□□□□□ -0.05
LYSMD2-201ENST00000267838 TRAV4A0A0B4J268 109 aa14.72□□□□□ -0.05
LYSMD2-201ENST00000267838 DEFB104AQ8WTQ1 72 aa14.72□□□□□ -0.05
LYSMD2-201ENST00000267838 TMEM141Q96I45 108 aa14.72□□□□□ -0.05
LYSMD2-201ENST00000267838 A0A1B0GWB2 263 aa14.71□□□□□ -0.05
LYSMD2-201ENST00000267838 ZNF479Q96JC4 524 aa14.71□□□□□ -0.05
LYSMD2-201ENST00000267838 TNFRSF18Q9Y5U5 241 aa14.71□□□□□ -0.05
LYSMD2-201ENST00000267838 I3L3M4 83 aa14.7□□□□□ -0.06
LYSMD2-201ENST00000267838 HERVK_113P61574 105 aa14.7□□□□□ -0.06
LYSMD2-201ENST00000267838 X6R8D5 127 aa14.7□□□□□ -0.06
LYSMD2-201ENST00000267838 SMIM9A6NGZ8 99 aa14.7□□□□□ -0.06
LYSMD2-201ENST00000267838 GAGE7O76087 117 aa14.7□□□□□ -0.06
LYSMD2-201ENST00000267838 GAGE12FP0CL80 117 aa14.7□□□□□ -0.06
LYSMD2-201ENST00000267838 GAGE12GP0CL81 117 aa14.7□□□□□ -0.06
LYSMD2-201ENST00000267838 GAGE12IP0CL82 117 aa14.7□□□□□ -0.06
LYSMD2-201ENST00000267838 PRADC1Q9BSG0 188 aa14.7□□□□□ -0.06
LYSMD2-201ENST00000267838 IGHV4-30-4P0DP06 118 aa14.69□□□□□ -0.06
LYSMD2-201ENST00000267838 DNAJC30Q96LL9 226 aa14.69□□□□□ -0.06
LYSMD2-201ENST00000267838 TIMM17AQ99595 171 aa14.69□□□□□ -0.06
LYSMD2-201ENST00000267838 Q9UF83 564 aa14.69□□□□□ -0.06
LYSMD2-201ENST00000267838 TMEM238LA0A1B0GVL6 79 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 A6NJY4 79 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 TSHBP01222 138 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 RIPPLY3P57055 190 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 KRTAP10-11P60412 298 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 TP53TG1Q9Y2A0 90 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 TRGV2A0A075B6R0 118 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 EMP1P54849 157 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 RHOHQ15669 191 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 DEFB135Q30KP9 77 aa14.68□□□□□ -0.06
LYSMD2-201ENST00000267838 F8W1H4 67 aa14.67□□□□□ -0.06
LYSMD2-201ENST00000267838 EGFEM1PQ0D2K5 195 aa14.67□□□□□ -0.06
LYSMD2-201ENST00000267838 PMVKQ15126 192 aa14.67□□□□□ -0.06
LYSMD2-201ENST00000267838 IGIPA6NJ69 53 aa14.66□□□□□ -0.06
LYSMD2-201ENST00000267838 ZNF815PA8K554 130 aa14.66□□□□□ -0.06
LYSMD2-201ENST00000267838 CIDEAO60543 219 aa14.65□□□□□ -0.06
LYSMD2-201ENST00000267838 K7EQD1 137 aa14.64□□□□□ -0.07
LYSMD2-201ENST00000267838 RPL39P62891 51 aaKnown RBP14.64□□□□□ -0.07
LYSMD2-201ENST00000267838 SCGB1D4Q6XE38 83 aa14.64□□□□□ -0.07
LYSMD2-201ENST00000267838 IGLV4-69A0A075B6H9 119 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms