RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CT83Q5H943 113 aa10.48□□□□□ -0.73
USE1-201ENST00000263897 CLPSL2Q6UWE3 100 aa10.48□□□□□ -0.73
USE1-201ENST00000263897 C20orf203Q8NBC4 194 aa10.48□□□□□ -0.73
USE1-201ENST00000263897 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
USE1-201ENST00000263897 FAT1Q14517 4588 aa10.48□□□□□ -0.73
USE1-201ENST00000263897 ZNF727A8MUV8 499 aa10.47□□□□□ -0.73
USE1-201ENST00000263897 HLA-DQA1P01909 254 aa10.47□□□□□ -0.73
USE1-201ENST00000263897 SRP19P09132 144 aaKnown RBP10.47□□□□□ -0.73
USE1-201ENST00000263897 TEX261Q6UWH6 196 aa10.47□□□□□ -0.73
USE1-201ENST00000263897 LINC01551Q86U37 167 aa10.47□□□□□ -0.73
USE1-201ENST00000263897 IGLV4-60A0A075B6I1 120 aa10.46□□□□□ -0.73
USE1-201ENST00000263897 AMTP48728 403 aa10.46□□□□□ -0.73
USE1-201ENST00000263897 TRAV8-4A0A0B4J246 113 aa10.45□□□□□ -0.74
USE1-201ENST00000263897 PRSS1P07477 247 aa10.45□□□□□ -0.74
USE1-201ENST00000263897 RPL39LQ96EH5 51 aaKnown RBP10.45□□□□□ -0.74
USE1-201ENST00000263897 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
USE1-201ENST00000263897 OSTCQ9NRP0 149 aa10.45□□□□□ -0.74
USE1-201ENST00000263897 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
USE1-201ENST00000263897 VPS13BQ7Z7G8 4022 aa10.44□□□□□ -0.74
USE1-201ENST00000263897 IGLV10-54A0A075B6I4 117 aa10.44□□□□□ -0.74
USE1-201ENST00000263897 FAM231BA6NCW3 169 aa10.44□□□□□ -0.74
USE1-201ENST00000263897 UBE2L6O14933 153 aa10.44□□□□□ -0.74
USE1-201ENST00000263897 DGAT2L7PQ6IED9 249 aa10.44□□□□□ -0.74
USE1-201ENST00000263897 TSKUQ8WUA8 353 aa10.44□□□□□ -0.74
USE1-201ENST00000263897 CHAC1Q9BUX1 264 aa10.44□□□□□ -0.74
USE1-201ENST00000263897 DNAH8Q96JB1 4490 aa10.44□□□□□ -0.74
USE1-201ENST00000263897 NCR2O95944 276 aa10.43□□□□□ -0.74
USE1-201ENST00000263897 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
USE1-201ENST00000263897 BORCS7Q96B45 105 aa10.43□□□□□ -0.74
USE1-201ENST00000263897 A0A1B0GUT8 65 aa10.42□□□□□ -0.74
USE1-201ENST00000263897 SDHAF1A6NFY7 115 aa10.42□□□□□ -0.74
USE1-201ENST00000263897 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
USE1-201ENST00000263897 TMEM241Q24JQ0 296 aa10.42□□□□□ -0.74
USE1-201ENST00000263897 LINC00528Q8N1L1 170 aa10.42□□□□□ -0.74
USE1-201ENST00000263897 CLRN3Q8NCR9 226 aa10.42□□□□□ -0.74
USE1-201ENST00000263897 TRBV6-5A0A0K0K1A5 114 aa10.41□□□□□ -0.74
USE1-201ENST00000263897 PLA2G1BP04054 148 aaKnown RBP10.41□□□□□ -0.74
USE1-201ENST00000263897 FAM74A3Q4VXF1 159 aa10.41□□□□□ -0.74
USE1-201ENST00000263897 TMEM191AQ9H0A3 160 aa10.41□□□□□ -0.74
USE1-201ENST00000263897 H7C423 109 aa10.4□□□□□ -0.74
USE1-201ENST00000263897 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
USE1-201ENST00000263897 CIRBP-AS1Q8TBR5 109 aa10.4□□□□□ -0.74
USE1-201ENST00000263897 V9GYV3 84 aa10.4□□□□□ -0.74
USE1-201ENST00000263897 C9JQL5 133 aa10.39□□□□□ -0.75
USE1-201ENST00000263897 I3L3M4 83 aa10.39□□□□□ -0.75
USE1-201ENST00000263897 GAS8-AS1O95177 125 aa10.39□□□□□ -0.75
USE1-201ENST00000263897 PMCHP20382 165 aa10.39□□□□□ -0.75
USE1-201ENST00000263897 AMMECR1LQ6DCA0 310 aa10.39□□□□□ -0.75
USE1-201ENST00000263897 ISOC2Q96AB3 205 aa10.39□□□□□ -0.75
USE1-201ENST00000263897 APCSP02743 223 aa10.38□□□□□ -0.75
USE1-201ENST00000263897 RAB4AP20338 218 aa10.38□□□□□ -0.75
USE1-201ENST00000263897 RPL23P62829 140 aaKnown RBP10.38□□□□□ -0.75
USE1-201ENST00000263897 RNF185Q96GF1 192 aa10.38□□□□□ -0.75
USE1-201ENST00000263897 ST20Q9HBF5 79 aa10.38□□□□□ -0.75
USE1-201ENST00000263897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.37□□□□□ -0.75
USE1-201ENST00000263897 IGKV2-29A2NJV5 120 aaPredicted RBP10.37□□□□□ -0.75
USE1-201ENST00000263897 SRSF3P84103 164 aaKnown RBP10.37□□□□□ -0.75
USE1-201ENST00000263897 RIGQ13278 110 aa10.37□□□□□ -0.75
USE1-201ENST00000263897 PEA15Q15121 130 aa10.37□□□□□ -0.75
USE1-201ENST00000263897 RNASEKQ6P5S7 137 aaKnown RBP10.37□□□□□ -0.75
USE1-201ENST00000263897 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
USE1-201ENST00000263897 hDV102S1A0JD36 115 aa10.36□□□□□ -0.75
USE1-201ENST00000263897 FGF6P10767 208 aa10.36□□□□□ -0.75
USE1-201ENST00000263897 POLR2KP53803 58 aaKnown RBP10.36□□□□□ -0.75
USE1-201ENST00000263897 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
USE1-201ENST00000263897 AMN1Q8IY45 258 aa10.36□□□□□ -0.75
USE1-201ENST00000263897 MRAP2Q96G30 205 aa10.36□□□□□ -0.75
USE1-201ENST00000263897 SMDT1Q9H4I9 107 aa10.36□□□□□ -0.75
USE1-201ENST00000263897 NAT8Q9UHE5 227 aa10.36□□□□□ -0.75
USE1-201ENST00000263897 IGKV3OR2-268A0A0C4DH90 116 aa10.35□□□□□ -0.75
USE1-201ENST00000263897 GAGE12HA6NDE8 117 aa10.35□□□□□ -0.75
USE1-201ENST00000263897 ESDP10768 282 aa10.35□□□□□ -0.75
USE1-201ENST00000263897 RPS10P46783 165 aaKnown RBP10.35□□□□□ -0.75
USE1-201ENST00000263897 CNBPP62633 177 aaKnown RBP10.35□□□□□ -0.75
USE1-201ENST00000263897 ADIRFQ15847 76 aa10.35□□□□□ -0.75
USE1-201ENST00000263897 NAT8BQ9UHF3 227 aa10.35□□□□□ -0.75
USE1-201ENST00000263897 TSHBP01222 138 aa10.34□□□□□ -0.75
USE1-201ENST00000263897 SLPIP03973 132 aa10.34□□□□□ -0.75
USE1-201ENST00000263897 ZNF25P17030 456 aaPredicted RBP10.34□□□□□ -0.75
USE1-201ENST00000263897 AP5S1Q9NUS5 200 aa10.34□□□□□ -0.75
USE1-201ENST00000263897 TRBV27A0A0K0K1C4 114 aa10.33□□□□□ -0.76
USE1-201ENST00000263897 CFAP161Q6P656 301 aa10.33□□□□□ -0.76
USE1-201ENST00000263897 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
USE1-201ENST00000263897 TMEM242Q9NWH2 141 aa10.33□□□□□ -0.76
USE1-201ENST00000263897 SMIM27A0A1W2PRY6 76 aa10.32□□□□□ -0.76
USE1-201ENST00000263897 KRTAP10-4P60372 401 aaPredicted RBP10.32□□□□□ -0.76
USE1-201ENST00000263897 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
USE1-201ENST00000263897 TMEM101Q96IK0 257 aa10.32□□□□□ -0.76
USE1-201ENST00000263897 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
USE1-201ENST00000263897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.32□□□□□ -0.76
USE1-201ENST00000263897 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.31□□□□□ -0.76
USE1-201ENST00000263897 SMKR1H3BMG3 65 aa10.31□□□□□ -0.76
USE1-201ENST00000263897 VCYO14598 125 aa10.31□□□□□ -0.76
USE1-201ENST00000263897 PPP1R17O96001 155 aa10.31□□□□□ -0.76
USE1-201ENST00000263897 C15orf56Q8N910 161 aa10.31□□□□□ -0.76
USE1-201ENST00000263897 PANO1I0J062 215 aa10.3□□□□□ -0.76
USE1-201ENST00000263897 FAM104BQ5XKR9 115 aa10.3□□□□□ -0.76
USE1-201ENST00000263897 MRPL52Q86TS9 123 aaKnown RBP10.3□□□□□ -0.76
USE1-201ENST00000263897 NRACQ8N912 160 aa10.3□□□□□ -0.76
USE1-201ENST00000263897 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms