RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 LINC00310P59036 64 aa14.36□□□□□ -0.11
RTCA-201ENST00000260563 ALMS1Q8TCU4 4167 aa14.35□□□□□ -0.11
RTCA-201ENST00000260563 CHCHD1Q96BP2 118 aaKnown RBP14.35□□□□□ -0.11
RTCA-201ENST00000260563 DAZ4Q86SG3 579 aaKnown RBP14.34□□□□□ -0.11
RTCA-201ENST00000260563 KIR2DL4Q99706 377 aa14.34□□□□□ -0.11
RTCA-201ENST00000260563 DAZ3Q9NR90 486 aaKnown RBP14.34□□□□□ -0.11
RTCA-201ENST00000260563 AP5S1Q9NUS5 200 aa14.34□□□□□ -0.11
RTCA-201ENST00000260563 IGHV3-38A0A0C4DH36 116 aa14.33□□□□□ -0.12
RTCA-201ENST00000260563 LINC01546A6NGU7 62 aa14.33□□□□□ -0.12
RTCA-201ENST00000260563 TCAPO15273 167 aa14.33□□□□□ -0.12
RTCA-201ENST00000260563 NUPR1O60356 82 aa14.32□□□□□ -0.12
RTCA-201ENST00000260563 SH2D6Q7Z4S9 175 aa14.32□□□□□ -0.12
RTCA-201ENST00000260563 K7EMI3 77 aa14.31□□□□□ -0.12
RTCA-201ENST00000260563 UBE2DNLQ8IWF7 75 aa14.31□□□□□ -0.12
RTCA-201ENST00000260563 DEFB104AQ8WTQ1 72 aa14.31□□□□□ -0.12
RTCA-201ENST00000260563 HSBP1O75506 76 aa14.31□□□□□ -0.12
RTCA-201ENST00000260563 TSHBP01222 138 aa14.31□□□□□ -0.12
RTCA-201ENST00000260563 ESDP10768 282 aa14.31□□□□□ -0.12
RTCA-201ENST00000260563 SNRPEP62304 92 aaKnown RBP14.31□□□□□ -0.12
RTCA-201ENST00000260563 LAGE3Q14657 143 aa14.31□□□□□ -0.12
RTCA-201ENST00000260563 LINC00476Q8WZB0 136 aa14.31□□□□□ -0.12
RTCA-201ENST00000260563 C5orf52A6NGY3 159 aa14.3□□□□□ -0.12
RTCA-201ENST00000260563 FCER1GP30273 86 aa14.3□□□□□ -0.12
RTCA-201ENST00000260563 CCL18P55774 89 aa14.3□□□□□ -0.12
RTCA-201ENST00000260563 LGALS9CQ6DKI2 356 aa14.3□□□□□ -0.12
RTCA-201ENST00000260563 ATP6V0E2Q8NHE4 81 aa14.3□□□□□ -0.12
RTCA-201ENST00000260563 COTL1Q14019 142 aa14.29□□□□□ -0.12
RTCA-201ENST00000260563 ORMDL2Q53FV1 153 aa14.29□□□□□ -0.12
RTCA-201ENST00000260563 LY6G6CO95867 125 aa14.28□□□□□ -0.12
RTCA-201ENST00000260563 PMCHL1Q16048 86 aa14.27□□□□□ -0.12
RTCA-201ENST00000260563 ESRGQ1W209 222 aa14.27□□□□□ -0.12
RTCA-201ENST00000260563 PDZD11Q5EBL8 140 aa14.27□□□□□ -0.12
RTCA-201ENST00000260563 GTSF1LQ9H1H1 148 aa14.26□□□□□ -0.13
RTCA-201ENST00000260563 LINC00588Q9Y4M8 146 aa14.26□□□□□ -0.13
RTCA-201ENST00000260563 DNAH1Q9P2D7 4330 aa14.26□□□□□ -0.13
RTCA-201ENST00000260563 IGHV1-24A0A0C4DH33 117 aa14.25□□□□□ -0.13
RTCA-201ENST00000260563 LYPD5Q6UWN5 251 aa14.25□□□□□ -0.13
RTCA-201ENST00000260563 HIST3H2BBQ8N257 126 aa14.25□□□□□ -0.13
RTCA-201ENST00000260563 FAM19A2Q8N3H0 131 aa14.25□□□□□ -0.13
RTCA-201ENST00000260563 VPS13DQ5THJ4 4388 aa14.25□□□□□ -0.13
RTCA-201ENST00000260563 TMEM97Q5BJF2 176 aa14.25□□□□□ -0.13
RTCA-201ENST00000260563 NTM-AS1Q6ZSK4 140 aa14.25□□□□□ -0.13
RTCA-201ENST00000260563 SACSQ9NZJ4 4579 aa14.24□□□□□ -0.13
RTCA-201ENST00000260563 LCE6AA0A183 80 aa14.24□□□□□ -0.13
RTCA-201ENST00000260563 AMTP48728 403 aa14.24□□□□□ -0.13
RTCA-201ENST00000260563 A0A096LNJ9 63 aa14.23□□□□□ -0.13
RTCA-201ENST00000260563 HBDP02042 147 aa14.23□□□□□ -0.13
RTCA-201ENST00000260563 BTF3P20290 206 aaKnown RBP14.23□□□□□ -0.13
RTCA-201ENST00000260563 CHCHD7Q9BUK0 85 aa14.23□□□□□ -0.13
RTCA-201ENST00000260563 MRPS16Q9Y3D3 137 aaKnown RBP14.23□□□□□ -0.13
RTCA-201ENST00000260563 KMT2CQ8NEZ4 4911 aaKnown RBP14.23□□□□□ -0.13
RTCA-201ENST00000260563 S100A2P29034 98 aa14.22□□□□□ -0.13
RTCA-201ENST00000260563 TIRAPP58753 221 aa14.22□□□□□ -0.13
RTCA-201ENST00000260563 TRBV6-8A0A0A6YYG3 113 aa14.21□□□□□ -0.13
RTCA-201ENST00000260563 G0S2P27469 103 aa14.21□□□□□ -0.13
RTCA-201ENST00000260563 TRBV25-1A0A075B6N4 114 aa14.2□□□□□ -0.14
RTCA-201ENST00000260563 C2orf66Q6UXQ4 117 aa14.2□□□□□ -0.14
RTCA-201ENST00000260563 C20orf203Q8NBC4 194 aa14.2□□□□□ -0.14
RTCA-201ENST00000260563 UPK3BQ9BT76 320 aa14.2□□□□□ -0.14
RTCA-201ENST00000260563 TMEM18Q96B42 140 aa14.2□□□□□ -0.14
RTCA-201ENST00000260563 LELP1Q5T871 98 aa14.19□□□□□ -0.14
RTCA-201ENST00000260563 TOMM6Q96B49 74 aa14.19□□□□□ -0.14
RTCA-201ENST00000260563 CYSLTR1Q9Y271 337 aa14.19□□□□□ -0.14
RTCA-201ENST00000260563 IFITM10A6NMD0 228 aa14.18□□□□□ -0.14
RTCA-201ENST00000260563 RPL39P62891 51 aaKnown RBP14.18□□□□□ -0.14
RTCA-201ENST00000260563 PACRGQ96M98 296 aaPredicted RBP14.18□□□□□ -0.14
RTCA-201ENST00000260563 HIST1H2BLQ99880 126 aa14.18□□□□□ -0.14
RTCA-201ENST00000260563 TMEM243Q9BU79 118 aa14.18□□□□□ -0.14
RTCA-201ENST00000260563 KMT2AQ03164 3969 aa14.18□□□□□ -0.14
RTCA-201ENST00000260563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.17□□□□□ -0.14
RTCA-201ENST00000260563 IGKV2-29A2NJV5 120 aaPredicted RBP14.17□□□□□ -0.14
RTCA-201ENST00000260563 LEPROTL1O95214 131 aa14.17□□□□□ -0.14
RTCA-201ENST00000260563 TRAV8-6A0A0B4J262 113 aa14.16□□□□□ -0.14
RTCA-201ENST00000260563 LINC01549A6NIU2 74 aa14.16□□□□□ -0.14
RTCA-201ENST00000260563 FABP4P15090 132 aa14.16□□□□□ -0.14
RTCA-201ENST00000260563 DNAH6Q9C0G6 4158 aa14.16□□□□□ -0.14
RTCA-201ENST00000260563 UBE2L6O14933 153 aa14.15□□□□□ -0.14
RTCA-201ENST00000260563 WFDC10BQ8IUB3 73 aa14.15□□□□□ -0.14
RTCA-201ENST00000260563 CHCHD5Q9BSY4 110 aa14.15□□□□□ -0.14
RTCA-201ENST00000260563 Q9H8V8 135 aa14.15□□□□□ -0.14
RTCA-201ENST00000260563 HYDINQ4G0P3 5121 aa14.14□□□□□ -0.15
RTCA-201ENST00000260563 H7C423 109 aa14.14□□□□□ -0.15
RTCA-201ENST00000260563 SIVA1O15304 175 aa14.14□□□□□ -0.15
RTCA-201ENST00000260563 SCGB3A1Q96QR1 104 aa14.14□□□□□ -0.15
RTCA-201ENST00000260563 HSPB8Q9UJY1 196 aa14.14□□□□□ -0.15
RTCA-201ENST00000260563 UBE2D4Q9Y2X8 147 aa14.13□□□□□ -0.15
RTCA-201ENST00000260563 GAGE6Q13070 117 aa14.12□□□□□ -0.15
RTCA-201ENST00000260563 LINC00173Q6ZV60 143 aa14.12□□□□□ -0.15
RTCA-201ENST00000260563 ERASQ7Z444 233 aa14.12□□□□□ -0.15
RTCA-201ENST00000260563 IGIPA6NJ69 53 aa14.11□□□□□ -0.15
RTCA-201ENST00000260563 ATP5LO75964 103 aa14.11□□□□□ -0.15
RTCA-201ENST00000260563 FGF6P10767 208 aa14.1□□□□□ -0.15
RTCA-201ENST00000260563 SMAGPQ0VAQ4 97 aa14.1□□□□□ -0.15
RTCA-201ENST00000260563 TIMM17AQ99595 171 aa14.1□□□□□ -0.15
RTCA-201ENST00000260563 SPANXA1Q9NS26 97 aa14.1□□□□□ -0.15
RTCA-201ENST00000260563 PYGO1Q9Y3Y4 419 aa14.1□□□□□ -0.15
RTCA-201ENST00000260563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.1□□□□□ -0.15
RTCA-201ENST00000260563 MRPL52Q86TS9 123 aaKnown RBP14.1□□□□□ -0.15
RTCA-201ENST00000260563 IFI27L1Q96BM0 104 aa14.1□□□□□ -0.15
RTCA-201ENST00000260563 TMEM141Q96I45 108 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms