RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 INAFM2P0DMQ5 153 aa13.17□□□□□ -0.3
CFC1-201ENST00000259216 DEFB104AQ8WTQ1 72 aa13.17□□□□□ -0.3
CFC1-201ENST00000259216 SMIM7Q9BQ49 75 aa13.17□□□□□ -0.3
CFC1-201ENST00000259216 USP17L23D6RBM5 183 aa13.16□□□□□ -0.3
CFC1-201ENST00000259216 CEBPGP53567 150 aa13.16□□□□□ -0.3
CFC1-201ENST00000259216 RPL39LQ96EH5 51 aaKnown RBP13.16□□□□□ -0.3
CFC1-201ENST00000259216 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
CFC1-201ENST00000259216 HLA-DQA1P01909 254 aa13.14□□□□□ -0.31
CFC1-201ENST00000259216 PRSS1P07477 247 aa13.14□□□□□ -0.31
CFC1-201ENST00000259216 REG3AQ06141 175 aa13.14□□□□□ -0.31
CFC1-201ENST00000259216 C14orf177Q52M58 125 aa13.14□□□□□ -0.31
CFC1-201ENST00000259216 SCXQ7RTU7 201 aa13.14□□□□□ -0.31
CFC1-201ENST00000259216 ZNF727A8MUV8 499 aa13.13□□□□□ -0.31
CFC1-201ENST00000259216 C9JQL5 133 aa13.13□□□□□ -0.31
CFC1-201ENST00000259216 COTL1Q14019 142 aa13.13□□□□□ -0.31
CFC1-201ENST00000259216 TSKUQ8WUA8 353 aa13.13□□□□□ -0.31
CFC1-201ENST00000259216 OSTCQ9NRP0 149 aa13.13□□□□□ -0.31
CFC1-201ENST00000259216 FAM229AH3BQW9 127 aa13.12□□□□□ -0.31
CFC1-201ENST00000259216 GAS8-AS1O95177 125 aa13.12□□□□□ -0.31
CFC1-201ENST00000259216 AMTP48728 403 aa13.12□□□□□ -0.31
CFC1-201ENST00000259216 HIGD1CA8MV81 97 aa13.11□□□□□ -0.31
CFC1-201ENST00000259216 CHAC1Q9BUX1 264 aa13.11□□□□□ -0.31
CFC1-201ENST00000259216 V9GYV3 84 aa13.11□□□□□ -0.31
CFC1-201ENST00000259216 DMBT1Q9UGM3 2413 aaPredicted RBP13.1□□□□□ -0.31
CFC1-201ENST00000259216 IGLV10-54A0A075B6I4 117 aa13.1□□□□□ -0.31
CFC1-201ENST00000259216 TRBV6-5A0A0K0K1A5 114 aa13.1□□□□□ -0.31
CFC1-201ENST00000259216 FAM231BA6NCW3 169 aa13.1□□□□□ -0.31
CFC1-201ENST00000259216 RNF185Q96GF1 192 aa13.1□□□□□ -0.31
CFC1-201ENST00000259216 MYCBP2O75592 4640 aa13.1□□□□□ -0.31
CFC1-201ENST00000259216 TRAV8-4A0A0B4J246 113 aa13.09□□□□□ -0.31
CFC1-201ENST00000259216 A0A1B0GUT8 65 aa13.09□□□□□ -0.31
CFC1-201ENST00000259216 TEX261Q6UWH6 196 aa13.09□□□□□ -0.31
CFC1-201ENST00000259216 SMIM15Q7Z3B0 74 aa13.09□□□□□ -0.31
CFC1-201ENST00000259216 ISOC2Q96AB3 205 aa13.09□□□□□ -0.31
CFC1-201ENST00000259216 SDHAF1A6NFY7 115 aa13.08□□□□□ -0.32
CFC1-201ENST00000259216 NCR2O95944 276 aa13.08□□□□□ -0.32
CFC1-201ENST00000259216 KRTAP10-4P60372 401 aaPredicted RBP13.08□□□□□ -0.32
CFC1-201ENST00000259216 SRSF3P84103 164 aaKnown RBP13.08□□□□□ -0.32
CFC1-201ENST00000259216 LINC00528Q8N1L1 170 aa13.08□□□□□ -0.32
CFC1-201ENST00000259216 TMEM191AQ9H0A3 160 aa13.08□□□□□ -0.32
CFC1-201ENST00000259216 DGAT2L7PQ6IED9 249 aa13.07□□□□□ -0.32
CFC1-201ENST00000259216 CIRBP-AS1Q8TBR5 109 aa13.07□□□□□ -0.32
CFC1-201ENST00000259216 RPS10P46783 165 aaKnown RBP13.06□□□□□ -0.32
CFC1-201ENST00000259216 RPL23P62829 140 aaKnown RBP13.06□□□□□ -0.32
CFC1-201ENST00000259216 C9orf163Q8N9P6 203 aa13.06□□□□□ -0.32
CFC1-201ENST00000259216 RAB4AP20338 218 aa13.05□□□□□ -0.32
CFC1-201ENST00000259216 TMEM241Q24JQ0 296 aa13.05□□□□□ -0.32
CFC1-201ENST00000259216 FAM74A3Q4VXF1 159 aa13.05□□□□□ -0.32
CFC1-201ENST00000259216 NUP35Q8NFH5 326 aa13.05□□□□□ -0.32
CFC1-201ENST00000259216 UBE2L6O14933 153 aa13.04□□□□□ -0.32
CFC1-201ENST00000259216 TSHBP01222 138 aa13.04□□□□□ -0.32
CFC1-201ENST00000259216 ESDP10768 282 aa13.04□□□□□ -0.32
CFC1-201ENST00000259216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.03□□□□□ -0.32
CFC1-201ENST00000259216 IGKV2-29A2NJV5 120 aaPredicted RBP13.03□□□□□ -0.32
CFC1-201ENST00000259216 H7C423 109 aa13.03□□□□□ -0.32
CFC1-201ENST00000259216 SLPIP03973 132 aa13.03□□□□□ -0.32
CFC1-201ENST00000259216 POLR2KP53803 58 aaKnown RBP13.03□□□□□ -0.32
CFC1-201ENST00000259216 CNBPP62633 177 aaKnown RBP13.03□□□□□ -0.32
CFC1-201ENST00000259216 AMN1Q8IY45 258 aa13.03□□□□□ -0.32
CFC1-201ENST00000259216 CLRN3Q8NCR9 226 aa13.03□□□□□ -0.32
CFC1-201ENST00000259216 BORCS7Q96B45 105 aa13.03□□□□□ -0.32
CFC1-201ENST00000259216 HERC1Q15751 4861 aa13.02□□□□□ -0.32
CFC1-201ENST00000259216 PANO1I0J062 215 aa13.02□□□□□ -0.33
CFC1-201ENST00000259216 I3L3M4 83 aa13.02□□□□□ -0.33
CFC1-201ENST00000259216 APCSP02743 223 aa13.02□□□□□ -0.33
CFC1-201ENST00000259216 FGF6P10767 208 aa13.02□□□□□ -0.33
CFC1-201ENST00000259216 SDIM1Q6ZPB5 146 aa13.02□□□□□ -0.33
CFC1-201ENST00000259216 C15orf56Q8N910 161 aa13.01□□□□□ -0.33
CFC1-201ENST00000259216 MRAP2Q96G30 205 aa13.01□□□□□ -0.33
CFC1-201ENST00000259216 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
CFC1-201ENST00000259216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.01□□□□□ -0.33
CFC1-201ENST00000259216 TRBV27A0A0K0K1C4 114 aa13□□□□□ -0.33
CFC1-201ENST00000259216 PLA2G1BP04054 148 aaKnown RBP13□□□□□ -0.33
CFC1-201ENST00000259216 NRACQ8N912 160 aa13□□□□□ -0.33
CFC1-201ENST00000259216 ST20Q9HBF5 79 aa13□□□□□ -0.33
CFC1-201ENST00000259216 TMEM242Q9NWH2 141 aa13□□□□□ -0.33
CFC1-201ENST00000259216 SMIM27A0A1W2PRY6 76 aa12.99□□□□□ -0.33
CFC1-201ENST00000259216 RIGQ13278 110 aa12.99□□□□□ -0.33
CFC1-201ENST00000259216 ADIRFQ15847 76 aa12.99□□□□□ -0.33
CFC1-201ENST00000259216 SMDT1Q9H4I9 107 aa12.99□□□□□ -0.33
CFC1-201ENST00000259216 hDV102S1A0JD36 115 aa12.98□□□□□ -0.33
CFC1-201ENST00000259216 GAGE12HA6NDE8 117 aa12.98□□□□□ -0.33
CFC1-201ENST00000259216 SMKR1H3BMG3 65 aa12.98□□□□□ -0.33
CFC1-201ENST00000259216 ZNF25P17030 456 aaPredicted RBP12.98□□□□□ -0.33
CFC1-201ENST00000259216 PMCHP20382 165 aa12.98□□□□□ -0.33
CFC1-201ENST00000259216 PEA15Q15121 130 aa12.98□□□□□ -0.33
CFC1-201ENST00000259216 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
CFC1-201ENST00000259216 NAT8BQ9UHF3 227 aa12.98□□□□□ -0.33
CFC1-201ENST00000259216 CIRBPQ14011 172 aaKnown RBP12.97□□□□□ -0.33
CFC1-201ENST00000259216 RNASEKQ6P5S7 137 aaKnown RBP12.97□□□□□ -0.33
CFC1-201ENST00000259216 MRPL52Q86TS9 123 aaKnown RBP12.96□□□□□ -0.33
CFC1-201ENST00000259216 CHCHD10Q8WYQ3 142 aaPredicted RBP12.96□□□□□ -0.33
CFC1-201ENST00000259216 IGKV3OR2-268A0A0C4DH90 116 aa12.95□□□□□ -0.34
CFC1-201ENST00000259216 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
CFC1-201ENST00000259216 FOXI1Q12951 378 aa12.94□□□□□ -0.34
CFC1-201ENST00000259216 MRPL51Q4U2R6 128 aaKnown RBP12.94□□□□□ -0.34
CFC1-201ENST00000259216 FAM104BQ5XKR9 115 aa12.94□□□□□ -0.34
CFC1-201ENST00000259216 A0A1B0GXF2 115 aa12.92□□□□□ -0.34
CFC1-201ENST00000259216 SUMO2P61956 95 aaKnown RBP12.92□□□□□ -0.34
CFC1-201ENST00000259216 CDC42SE2Q9NRR3 84 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms