RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 IGLV4-3A0A075B6K6 122 aa18.54■□□□□ 0.56
ACTR3B-201ENST00000256001 TAL2Q16559 108 aa18.54■□□□□ 0.56
ACTR3B-201ENST00000256001 RNASE8Q8TDE3 154 aaKnown RBP18.54■□□□□ 0.56
ACTR3B-201ENST00000256001 IL17DQ8TAD2 202 aa18.54■□□□□ 0.56
ACTR3B-201ENST00000256001 VCX2Q9H322 139 aa18.54■□□□□ 0.56
ACTR3B-201ENST00000256001 KRTAP10-3P60369 221 aa18.53■□□□□ 0.56
ACTR3B-201ENST00000256001 C19orf73Q9NVV2 129 aa18.53■□□□□ 0.56
ACTR3B-201ENST00000256001 GIG44P09565 113 aaPredicted RBP18.52■□□□□ 0.56
ACTR3B-201ENST00000256001 RPL35AP18077 110 aaKnown RBP18.52■□□□□ 0.56
ACTR3B-201ENST00000256001 DNAJC30Q96LL9 226 aa18.52■□□□□ 0.56
ACTR3B-201ENST00000256001 NFE4Q86UQ8 179 aa18.51■□□□□ 0.55
ACTR3B-201ENST00000256001 TMEM263Q8WUH6 116 aaKnown RBP18.51■□□□□ 0.55
ACTR3B-201ENST00000256001 FAM110AQ9BQ89 295 aa18.51■□□□□ 0.55
ACTR3B-201ENST00000256001 NHP2Q9NX24 153 aaKnown RBP18.51■□□□□ 0.55
ACTR3B-201ENST00000256001 JMJD1CQ15652 2540 aa18.51■□□□□ 0.55
ACTR3B-201ENST00000256001 NOTCH2Q04721 2471 aa18.51■□□□□ 0.55
ACTR3B-201ENST00000256001 IGHV3-38A0A0C4DH36 116 aa18.5■□□□□ 0.55
ACTR3B-201ENST00000256001 K7ERJ3 54 aa18.5■□□□□ 0.55
ACTR3B-201ENST00000256001 SCGB1D4Q6XE38 83 aa18.5■□□□□ 0.55
ACTR3B-201ENST00000256001 PHLDA1Q8WV24 401 aaPredicted RBP18.5■□□□□ 0.55
ACTR3B-201ENST00000256001 PYGO1Q9Y3Y4 419 aa18.5■□□□□ 0.55
ACTR3B-201ENST00000256001 CEMP1Q6PRD7 247 aaPredicted RBP18.5■□□□□ 0.55
ACTR3B-201ENST00000256001 TRBV7-3A0A075B6L6 115 aa18.49■□□□□ 0.55
ACTR3B-201ENST00000256001 NDUFA11Q86Y39 141 aa18.49■□□□□ 0.55
ACTR3B-201ENST00000256001 Q6ZTI0 123 aa18.49■□□□□ 0.55
ACTR3B-201ENST00000256001 PLEKHB2Q96CS7 222 aa18.49■□□□□ 0.55
ACTR3B-201ENST00000256001 CHCHD7Q9BUK0 85 aa18.49■□□□□ 0.55
ACTR3B-201ENST00000256001 ZNF479Q96JC4 524 aa18.48■□□□□ 0.55
ACTR3B-201ENST00000256001 PF4P02776 101 aa18.47■□□□□ 0.55
ACTR3B-201ENST00000256001 A0A0J9YXV3 536 aa18.47■□□□□ 0.55
ACTR3B-201ENST00000256001 GAGE10A6NGK3 116 aa18.47■□□□□ 0.55
ACTR3B-201ENST00000256001 FAM104AQ969W3 186 aa18.47■□□□□ 0.55
ACTR3B-201ENST00000256001 TSPEAR-AS2P59090 65 aa18.46■□□□□ 0.55
ACTR3B-201ENST00000256001 OTOGQ6ZRI0 2925 aa18.46■□□□□ 0.55
ACTR3B-201ENST00000256001 INAFM1C9JVW0 142 aa18.46■□□□□ 0.55
ACTR3B-201ENST00000256001 COTL1Q14019 142 aa18.46■□□□□ 0.55
ACTR3B-201ENST00000256001 NOP10Q9NPE3 64 aaKnown RBP18.46■□□□□ 0.55
ACTR3B-201ENST00000256001 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.45■□□□□ 0.54
ACTR3B-201ENST00000256001 IGKV2-29A2NJV5 120 aaPredicted RBP18.45■□□□□ 0.54
ACTR3B-201ENST00000256001 NOTCH3Q9UM47 2321 aa18.45■□□□□ 0.54
ACTR3B-201ENST00000256001 AMELXQ99217 191 aa18.45■□□□□ 0.54
ACTR3B-201ENST00000256001 A0A1W2PPM0 123 aa18.44■□□□□ 0.54
ACTR3B-201ENST00000256001 ZNF22P17026 224 aaPredicted RBP18.43■□□□□ 0.54
ACTR3B-201ENST00000256001 RNASE13Q5GAN3 156 aaKnown RBP18.43■□□□□ 0.54
ACTR3B-201ENST00000256001 C1QTNF4Q9BXJ3 329 aa18.43■□□□□ 0.54
ACTR3B-201ENST00000256001 UBE2D4Q9Y2X8 147 aa18.43■□□□□ 0.54
ACTR3B-201ENST00000256001 TMEM223A0PJW6 202 aa18.43■□□□□ 0.54
ACTR3B-201ENST00000256001 SAMD5Q5TGI4 173 aa18.43■□□□□ 0.54
ACTR3B-201ENST00000256001 GTF2H5Q6ZYL4 71 aa18.43■□□□□ 0.54
ACTR3B-201ENST00000256001 J3QQQ9 107 aa18.42■□□□□ 0.54
ACTR3B-201ENST00000256001 C12orf74Q32Q52 190 aa18.42■□□□□ 0.54
ACTR3B-201ENST00000256001 SPANXA1Q9NS26 97 aa18.42■□□□□ 0.54
ACTR3B-201ENST00000256001 TRAV4A0A0B4J268 109 aa18.41■□□□□ 0.54
ACTR3B-201ENST00000256001 CRYBA4P53673 196 aa18.41■□□□□ 0.54
ACTR3B-201ENST00000256001 SRSF9Q13242 221 aaKnown RBP eCLIP18.41■□□□□ 0.54
ACTR3B-201ENST00000256001 LINC00482Q8N8I6 264 aa18.41■□□□□ 0.54
ACTR3B-201ENST00000256001 C16orf74Q96GX8 76 aa18.41■□□□□ 0.54
ACTR3B-201ENST00000256001 LGALS3P17931 250 aaKnown RBP18.41■□□□□ 0.54
ACTR3B-201ENST00000256001 DAZ2Q13117 558 aaKnown RBP18.41■□□□□ 0.54
ACTR3B-201ENST00000256001 CSNK1G2-AS1Q8NCQ2 148 aa18.41■□□□□ 0.54
ACTR3B-201ENST00000256001 IGHV3-64A0A075B6Q5 118 aa18.39■□□□□ 0.54
ACTR3B-201ENST00000256001 K7EP34 96 aa18.39■□□□□ 0.54
ACTR3B-201ENST00000256001 A0A0J9YY99 117 aa18.39■□□□□ 0.53
ACTR3B-201ENST00000256001 PLAC8L1A1L4L8 177 aa18.39■□□□□ 0.53
ACTR3B-201ENST00000256001 K7EQD1 137 aa18.39■□□□□ 0.53
ACTR3B-201ENST00000256001 FABP2P12104 132 aa18.39■□□□□ 0.53
ACTR3B-201ENST00000256001 LEPROTO15243 131 aa18.38■□□□□ 0.53
ACTR3B-201ENST00000256001 MRPS36P82909 103 aaKnown RBP18.38■□□□□ 0.53
ACTR3B-201ENST00000256001 RRN3P1Q2M238 152 aa18.38■□□□□ 0.53
ACTR3B-201ENST00000256001 SPCS1Q9Y6A9 102 aa18.38■□□□□ 0.53
ACTR3B-201ENST00000256001 RPL36AP83881 106 aaKnown RBP18.37■□□□□ 0.53
ACTR3B-201ENST00000256001 RPL36ALQ969Q0 106 aaKnown RBP18.37■□□□□ 0.53
ACTR3B-201ENST00000256001 Q6ZUT4 128 aa18.37■□□□□ 0.53
ACTR3B-201ENST00000256001 SLC25A29Q8N8R3 303 aa18.37■□□□□ 0.53
ACTR3B-201ENST00000256001 TRBV10-1A0A0K0K1A3 114 aa18.36■□□□□ 0.53
ACTR3B-201ENST00000256001 GAGE12BA1L429 117 aa18.36■□□□□ 0.53
ACTR3B-201ENST00000256001 GAGE7O76087 117 aa18.36■□□□□ 0.53
ACTR3B-201ENST00000256001 GAGE12FP0CL80 117 aa18.36■□□□□ 0.53
ACTR3B-201ENST00000256001 GAGE12GP0CL81 117 aa18.36■□□□□ 0.53
ACTR3B-201ENST00000256001 GAGE12IP0CL82 117 aa18.36■□□□□ 0.53
ACTR3B-201ENST00000256001 TRGV2A0A075B6R0 118 aa18.35■□□□□ 0.53
ACTR3B-201ENST00000256001 IGLL5B9A064 214 aa18.34■□□□□ 0.53
ACTR3B-201ENST00000256001 A0A1B0GWB2 263 aa18.33■□□□□ 0.53
ACTR3B-201ENST00000256001 GAGE12JA6NER3 117 aa18.33■□□□□ 0.52
ACTR3B-201ENST00000256001 GAGE4Q13068 117 aa18.33■□□□□ 0.52
ACTR3B-201ENST00000256001 GAGE5Q13069 117 aa18.33■□□□□ 0.52
ACTR3B-201ENST00000256001 GAGE13Q4V321 117 aa18.33■□□□□ 0.52
ACTR3B-201ENST00000256001 OR5A1Q8NGJ0 315 aa18.33■□□□□ 0.52
ACTR3B-201ENST00000256001 DGAT2L7PQ6IED9 249 aa18.32■□□□□ 0.52
ACTR3B-201ENST00000256001 C2CD3Q4AC94 2353 aa18.32■□□□□ 0.52
ACTR3B-201ENST00000256001 TMEM238LA0A1B0GVL6 79 aa18.31■□□□□ 0.52
ACTR3B-201ENST00000256001 A6NJY4 79 aa18.31■□□□□ 0.52
ACTR3B-201ENST00000256001 OVOL2Q9BRP0 275 aa18.31■□□□□ 0.52
ACTR3B-201ENST00000256001 FN1P02751 2386 aaKnown RBP18.31■□□□□ 0.52
ACTR3B-201ENST00000256001 TINCRA0A1B0GVN0 87 aa18.31■□□□□ 0.52
ACTR3B-201ENST00000256001 DAZ4Q86SG3 579 aaKnown RBP18.31■□□□□ 0.52
ACTR3B-201ENST00000256001 TIMM21Q9BVV7 248 aa18.31■□□□□ 0.52
ACTR3B-201ENST00000256001 DAZ3Q9NR90 486 aaKnown RBP18.31■□□□□ 0.52
ACTR3B-201ENST00000256001 NSD1Q96L73 2696 aaPredicted RBP18.31■□□□□ 0.52
ACTR3B-201ENST00000256001 SPANXB1Q9NS25 103 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms