RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CGB7P0DN87 165 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 LINC01356Q8N9X3 169 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 IGLV4-69A0A075B6H9 119 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 H3BRN7 92 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 IGHG2P01859 326 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 RHOHQ15669 191 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 DEFB108BQ8NET1 73 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 C16orf92Q96LL3 132 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 TMEM243Q9BU79 118 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 FN1P02751 2386 aaKnown RBP8.86□□□□□ -0.99
CCNA1-201ENST00000255465 NSD1Q96L73 2696 aaPredicted RBP8.86□□□□□ -0.99
CCNA1-201ENST00000255465 B4DSR2 109 aa8.86□□□□□ -0.99
CCNA1-201ENST00000255465 USP17L23D6RBM5 183 aa8.86□□□□□ -0.99
CCNA1-201ENST00000255465 H7C2G1 150 aa8.86□□□□□ -0.99
CCNA1-201ENST00000255465 GAS8-AS1O95177 125 aa8.86□□□□□ -0.99
CCNA1-201ENST00000255465 C2orf66Q6UXQ4 117 aa8.86□□□□□ -0.99
CCNA1-201ENST00000255465 FAM19A1Q7Z5A9 133 aa8.86□□□□□ -0.99
CCNA1-201ENST00000255465 SRRM5B3KS81 715 aa8.85□□□□□ -0.99
CCNA1-201ENST00000255465 MSMBP08118 114 aa8.85□□□□□ -0.99
CCNA1-201ENST00000255465 LYPD2Q6UXB3 125 aa8.85□□□□□ -0.99
CCNA1-201ENST00000255465 INAFM1C9JVW0 142 aa8.85□□□□□ -0.99
CCNA1-201ENST00000255465 GATA1P15976 413 aaPredicted RBP8.85□□□□□ -0.99
CCNA1-201ENST00000255465 WT1-ASQ06250 92 aa8.85□□□□□ -0.99
CCNA1-201ENST00000255465 C9orf139Q6ZV77 190 aa8.85□□□□□ -0.99
CCNA1-201ENST00000255465 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
CCNA1-201ENST00000255465 TIMM17AQ99595 171 aa8.85□□□□□ -0.99
CCNA1-201ENST00000255465 H3BTX0 84 aa8.84□□□□□ -0.99
CCNA1-201ENST00000255465 UBE2E1P51965 193 aa8.84□□□□□ -0.99
CCNA1-201ENST00000255465 SUMO2P61956 95 aaKnown RBP8.84□□□□□ -0.99
CCNA1-201ENST00000255465 CD164Q04900 197 aa8.84□□□□□ -0.99
CCNA1-201ENST00000255465 C1orf229Q6ZS94 237 aaPredicted RBP8.84□□□□□ -0.99
CCNA1-201ENST00000255465 CD177Q8N6Q3 437 aa8.84□□□□□ -0.99
CCNA1-201ENST00000255465 LINC00574Q9H8X3 128 aa8.84□□□□□ -0.99
CCNA1-201ENST00000255465 MSRB1Q9NZV6 116 aa8.84□□□□□ -0.99
CCNA1-201ENST00000255465 MRPL36Q9P0J6 103 aaKnown RBP8.84□□□□□ -0.99
CCNA1-201ENST00000255465 ZNF561-AS1K7EIQ3 104 aa8.83□□□□□ -1
CCNA1-201ENST00000255465 ZFP36P26651 326 aaKnown RBP8.83□□□□□ -1
CCNA1-201ENST00000255465 FHL2Q14192 279 aa8.83□□□□□ -1
CCNA1-201ENST00000255465 ATP5EP2Q5VTU8 51 aa8.83□□□□□ -1
CCNA1-201ENST00000255465 ZNF575Q86XF7 245 aa8.83□□□□□ -1
CCNA1-201ENST00000255465 LINC01561Q8N1V8 128 aa8.83□□□□□ -1
CCNA1-201ENST00000255465 CTSZQ9UBR2 303 aa8.83□□□□□ -1
CCNA1-201ENST00000255465 TSPEAR-AS2P59090 65 aa8.83□□□□□ -1
CCNA1-201ENST00000255465 RNF182Q8N6D2 247 aa8.83□□□□□ -1
CCNA1-201ENST00000255465 EEF1AKMT3Q96AZ1 226 aa8.83□□□□□ -1
CCNA1-201ENST00000255465 ANK3Q12955 4377 aaKnown RBP8.82□□□□□ -1
CCNA1-201ENST00000255465 A0A1W2PRX2 142 aa8.82□□□□□ -1
CCNA1-201ENST00000255465 LYZP61626 148 aa8.82□□□□□ -1
CCNA1-201ENST00000255465 PMAIP1Q13794 54 aa8.82□□□□□ -1
CCNA1-201ENST00000255465 C14orf178Q8N769 122 aaPredicted RBP8.82□□□□□ -1
CCNA1-201ENST00000255465 KAAG1Q9UBP8 84 aa8.82□□□□□ -1
CCNA1-201ENST00000255465 DSCAML1Q8TD84 2053 aa8.82□□□□□ -1
CCNA1-201ENST00000255465 CGB1A6NKQ9 187 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 I3L3M4 83 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 ZNF833PQ6ZTB9 187 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 CCL13Q99616 98 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 DCTN5Q9BTE1 182 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 SETD2Q9BYW2 2564 aaPredicted RBP8.81□□□□□ -1
CCNA1-201ENST00000255465 ZFHX3Q15911 3703 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 TRAV8-3A0A0A6YYJ7 113 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 TFF1P04155 84 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 ZNF876PQ49A33 203 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 SVEP1Q4LDE5 3571 aa8.81□□□□□ -1
CCNA1-201ENST00000255465 NIPBLQ6KC79 2804 aaeCLIP8.81□□□□□ -1
CCNA1-201ENST00000255465 IGKV1D-17A0A075B6S4 117 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 A0A0J9YXY3 114 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 RBMY1BA6NDE4 496 aaKnown RBP8.8□□□□□ -1
CCNA1-201ENST00000255465 RBMY1EA6NEQ0 496 aaKnown RBP8.8□□□□□ -1
CCNA1-201ENST00000255465 TIMM17BO60830 172 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 AVPP01185 164 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 RBMY1DP0C7P1 496 aaKnown RBP8.8□□□□□ -1
CCNA1-201ENST00000255465 RBMY1A1P0DJD3 496 aaKnown RBP8.8□□□□□ -1
CCNA1-201ENST00000255465 RBMY1CP0DJD4 496 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 CFHR3Q02985 330 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 RBMY1FQ15415 496 aaKnown RBP8.8□□□□□ -1
CCNA1-201ENST00000255465 C17orf58Q2M2W7 97 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 S100A7L2Q5SY68 101 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 DYNAPQ8N1N2 210 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 BRK1Q8WUW1 75 aa8.8□□□□□ -1
CCNA1-201ENST00000255465 IGIPA6NJ69 53 aa8.79□□□□□ -1
CCNA1-201ENST00000255465 COX7A2LO14548 114 aa8.79□□□□□ -1
CCNA1-201ENST00000255465 NDUFC1O43677 76 aa8.79□□□□□ -1
CCNA1-201ENST00000255465 TIRAPP58753 221 aa8.79□□□□□ -1
CCNA1-201ENST00000255465 FP248Q71RG6 208 aaPredicted RBP8.79□□□□□ -1
CCNA1-201ENST00000255465 CLEC2BQ92478 149 aa8.79□□□□□ -1
CCNA1-201ENST00000255465 GAFA1Q96PS6 74 aa8.79□□□□□ -1
CCNA1-201ENST00000255465 IGHV3OR16-10A0A075B7F0 116 aa8.79□□□□□ -1
CCNA1-201ENST00000255465 IGKV1-16P04430 117 aa8.79□□□□□ -1
CCNA1-201ENST00000255465 TMEM61Q8N0U2 210 aa8.79□□□□□ -1
CCNA1-201ENST00000255465 NAV3Q8IVL0 2385 aa8.78□□□□□ -1
CCNA1-201ENST00000255465 NDUFB3O43676 98 aa8.78□□□□□ -1
CCNA1-201ENST00000255465 IGHV1-69P01742 117 aa8.78□□□□□ -1
CCNA1-201ENST00000255465 DAZ2Q13117 558 aaKnown RBP8.78□□□□□ -1
CCNA1-201ENST00000255465 DAZ4Q86SG3 579 aaKnown RBP8.78□□□□□ -1
CCNA1-201ENST00000255465 PRR15Q8IV56 129 aa8.78□□□□□ -1
CCNA1-201ENST00000255465 ZNRF1Q8ND25 227 aa8.78□□□□□ -1
CCNA1-201ENST00000255465 DAZ1Q9NQZ3 744 aaKnown RBP8.78□□□□□ -1
CCNA1-201ENST00000255465 DAZ3Q9NR90 486 aaKnown RBP8.78□□□□□ -1
CCNA1-201ENST00000255465 UBE2D4Q9Y2X8 147 aa8.78□□□□□ -1
CCNA1-201ENST00000255465 TRBV10-3A0A0K0K1G6 114 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms