RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 Q8N976 141 aa8.47□□□□□ -1.05
VPREB3-201ENST00000248948 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
VPREB3-201ENST00000248948 MRAP2Q96G30 205 aa8.47□□□□□ -1.05
VPREB3-201ENST00000248948 C1orf43Q9BWL3 253 aa8.47□□□□□ -1.05
VPREB3-201ENST00000248948 IGLV5-52A0A0A0MRZ9 124 aa8.46□□□□□ -1.06
VPREB3-201ENST00000248948 A0A1B0GUV1 79 aa8.46□□□□□ -1.06
VPREB3-201ENST00000248948 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.06
VPREB3-201ENST00000248948 ENHOQ6UWT2 76 aa8.46□□□□□ -1.06
VPREB3-201ENST00000248948 UBE2L6O14933 153 aa8.45□□□□□ -1.06
VPREB3-201ENST00000248948 APCSP02743 223 aa8.45□□□□□ -1.06
VPREB3-201ENST00000248948 WFDC2Q14508 124 aa8.45□□□□□ -1.06
VPREB3-201ENST00000248948 AMN1Q8IY45 258 aa8.45□□□□□ -1.06
VPREB3-201ENST00000248948 MAPKAPK5-AS1Q8N8E1 139 aa8.45□□□□□ -1.06
VPREB3-201ENST00000248948 RNF185Q96GF1 192 aa8.45□□□□□ -1.06
VPREB3-201ENST00000248948 H7C423 109 aa8.44□□□□□ -1.06
VPREB3-201ENST00000248948 PPP1R2P9O14990 202 aa8.44□□□□□ -1.06
VPREB3-201ENST00000248948 PPP1R17O96001 155 aa8.44□□□□□ -1.06
VPREB3-201ENST00000248948 S100A8P05109 93 aa8.44□□□□□ -1.06
VPREB3-201ENST00000248948 RAB4AP20338 218 aa8.44□□□□□ -1.06
VPREB3-201ENST00000248948 GCSHP23434 173 aa8.44□□□□□ -1.06
VPREB3-201ENST00000248948 C20orf203Q8NBC4 194 aa8.44□□□□□ -1.06
VPREB3-201ENST00000248948 I3L3M4 83 aa8.43□□□□□ -1.06
VPREB3-201ENST00000248948 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
VPREB3-201ENST00000248948 REG3AQ06141 175 aa8.43□□□□□ -1.06
VPREB3-201ENST00000248948 C14orf177Q52M58 125 aa8.43□□□□□ -1.06
VPREB3-201ENST00000248948 LINC00269Q8N2A0 174 aa8.43□□□□□ -1.06
VPREB3-201ENST00000248948 TMEM70Q9BUB7 260 aa8.43□□□□□ -1.06
VPREB3-201ENST00000248948 ST20Q9HBF5 79 aa8.43□□□□□ -1.06
VPREB3-201ENST00000248948 LECT2O14960 151 aa8.42□□□□□ -1.06
VPREB3-201ENST00000248948 KRTAP10-1P60331 282 aa8.42□□□□□ -1.06
VPREB3-201ENST00000248948 HBBP68871 147 aa8.42□□□□□ -1.06
VPREB3-201ENST00000248948 UQCC3Q6UW78 93 aa8.42□□□□□ -1.06
VPREB3-201ENST00000248948 CLPSL2Q6UWE3 100 aa8.42□□□□□ -1.06
VPREB3-201ENST00000248948 ATP5L2Q7Z4Y8 100 aa8.42□□□□□ -1.06
VPREB3-201ENST00000248948 BAALCQ8WXS3 180 aa8.42□□□□□ -1.06
VPREB3-201ENST00000248948 ABCA13Q86UQ4 5058 aa8.41□□□□□ -1.06
VPREB3-201ENST00000248948 IGLV4-60A0A075B6I1 120 aa8.41□□□□□ -1.06
VPREB3-201ENST00000248948 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
VPREB3-201ENST00000248948 TRBV27A0A0K0K1C4 114 aa8.41□□□□□ -1.06
VPREB3-201ENST00000248948 A0A1B0GXF2 115 aa8.41□□□□□ -1.06
VPREB3-201ENST00000248948 GAS8-AS1O95177 125 aa8.41□□□□□ -1.06
VPREB3-201ENST00000248948 ZNF25P17030 456 aaPredicted RBP8.41□□□□□ -1.06
VPREB3-201ENST00000248948 RPS10P46783 165 aaKnown RBP8.41□□□□□ -1.06
VPREB3-201ENST00000248948 IFITM2Q01629 132 aa8.41□□□□□ -1.06
VPREB3-201ENST00000248948 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
VPREB3-201ENST00000248948 LINC00862A6NCI5 91 aa8.4□□□□□ -1.06
VPREB3-201ENST00000248948 F8W036 122 aa8.4□□□□□ -1.06
VPREB3-201ENST00000248948 TSHBP01222 138 aa8.4□□□□□ -1.06
VPREB3-201ENST00000248948 HLA-DQA1P01909 254 aa8.4□□□□□ -1.06
VPREB3-201ENST00000248948 PMCHP20382 165 aa8.4□□□□□ -1.06
VPREB3-201ENST00000248948 CAMPP49913 170 aa8.4□□□□□ -1.06
VPREB3-201ENST00000248948 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
VPREB3-201ENST00000248948 NRACQ8N912 160 aa8.4□□□□□ -1.06
VPREB3-201ENST00000248948 ANAPC16Q96DE5 110 aa8.4□□□□□ -1.06
VPREB3-201ENST00000248948 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.39□□□□□ -1.07
VPREB3-201ENST00000248948 MT-ND4LP03901 98 aa8.39□□□□□ -1.07
VPREB3-201ENST00000248948 ESDP10768 282 aa8.39□□□□□ -1.07
VPREB3-201ENST00000248948 SUMO2P61956 95 aaKnown RBP8.39□□□□□ -1.07
VPREB3-201ENST00000248948 MRPL51Q4U2R6 128 aaKnown RBP8.39□□□□□ -1.07
VPREB3-201ENST00000248948 AMMECR1LQ6DCA0 310 aa8.39□□□□□ -1.07
VPREB3-201ENST00000248948 MRPL54Q6P161 138 aaKnown RBP8.39□□□□□ -1.07
VPREB3-201ENST00000248948 KRTAP26-1Q6PEX3 210 aa8.39□□□□□ -1.07
VPREB3-201ENST00000248948 DEFB104AQ8WTQ1 72 aa8.39□□□□□ -1.07
VPREB3-201ENST00000248948 TMEM242Q9NWH2 141 aa8.39□□□□□ -1.07
VPREB3-201ENST00000248948 DNAH8Q96JB1 4490 aa8.38□□□□□ -1.07
VPREB3-201ENST00000248948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.38□□□□□ -1.07
VPREB3-201ENST00000248948 IGKV2-29A2NJV5 120 aaPredicted RBP8.38□□□□□ -1.07
VPREB3-201ENST00000248948 SMKR1H3BMG3 65 aa8.38□□□□□ -1.07
VPREB3-201ENST00000248948 FGF6P10767 208 aa8.38□□□□□ -1.07
VPREB3-201ENST00000248948 Q8N1X5 172 aa8.38□□□□□ -1.07
VPREB3-201ENST00000248948 TRBV24-1A0A075B6N3 115 aa8.37□□□□□ -1.07
VPREB3-201ENST00000248948 C7orf77A4D0Y5 90 aa8.37□□□□□ -1.07
VPREB3-201ENST00000248948 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
VPREB3-201ENST00000248948 VCYO14598 125 aa8.37□□□□□ -1.07
VPREB3-201ENST00000248948 PPBPP02775 128 aa8.37□□□□□ -1.07
VPREB3-201ENST00000248948 RPL32P62910 135 aaKnown RBP8.37□□□□□ -1.07
VPREB3-201ENST00000248948 KIR2DL4Q99706 377 aa8.37□□□□□ -1.07
VPREB3-201ENST00000248948 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
VPREB3-201ENST00000248948 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 PHOX2AO14813 284 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 TCAPO15273 167 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 ADCYAP1P18509 176 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 FCER1GP30273 86 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 CKS2P33552 79 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 XGP55808 180 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 RNASEKQ6P5S7 137 aaKnown RBP8.36□□□□□ -1.07
VPREB3-201ENST00000248948 Q6ZSA8 131 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 MRPL52Q86TS9 123 aaKnown RBP8.36□□□□□ -1.07
VPREB3-201ENST00000248948 TMEM101Q96IK0 257 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 BTF3L4Q96K17 158 aa8.36□□□□□ -1.07
VPREB3-201ENST00000248948 TMEM218A2RU14 115 aa8.35□□□□□ -1.07
VPREB3-201ENST00000248948 SMAGPQ0VAQ4 97 aa8.35□□□□□ -1.07
VPREB3-201ENST00000248948 OR5A1Q8NGJ0 315 aa8.35□□□□□ -1.07
VPREB3-201ENST00000248948 D6R8Y8 96 aa8.34□□□□□ -1.07
VPREB3-201ENST00000248948 TNFRSF6BO95407 300 aa8.34□□□□□ -1.07
VPREB3-201ENST00000248948 ORMDL3Q8N138 153 aa8.34□□□□□ -1.07
VPREB3-201ENST00000248948 CLRN3Q8NCR9 226 aa8.34□□□□□ -1.07
VPREB3-201ENST00000248948 IMMP2LQ96T52 175 aa8.34□□□□□ -1.07
VPREB3-201ENST00000248948 SMIM2Q9BVW6 85 aa8.34□□□□□ -1.07
VPREB3-201ENST00000248948 DGAT2L7PQ6IED9 249 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms