RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TRBV7-3A0A075B6L6 115 aa9.4□□□□□ -0.9
SLIRP-201ENST00000238688 TMEM97Q5BJF2 176 aa9.4□□□□□ -0.9
SLIRP-201ENST00000238688 CASC10Q5T4H9 136 aa9.4□□□□□ -0.9
SLIRP-201ENST00000238688 Q6ZN92 141 aa9.4□□□□□ -0.9
SLIRP-201ENST00000238688 ZNF664Q8N3J9 261 aa9.4□□□□□ -0.9
SLIRP-201ENST00000238688 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
SLIRP-201ENST00000238688 MUC7Q8TAX7 377 aa9.4□□□□□ -0.9
SLIRP-201ENST00000238688 SCGB3A1Q96QR1 104 aa9.4□□□□□ -0.9
SLIRP-201ENST00000238688 PYGO1Q9Y3Y4 419 aa9.4□□□□□ -0.9
SLIRP-201ENST00000238688 PRSS1P07477 247 aa9.39□□□□□ -0.91
SLIRP-201ENST00000238688 PLNP26678 52 aa9.39□□□□□ -0.91
SLIRP-201ENST00000238688 LINC00173Q6ZV60 143 aa9.39□□□□□ -0.91
SLIRP-201ENST00000238688 TSHBP01222 138 aa9.38□□□□□ -0.91
SLIRP-201ENST00000238688 PRM2P04554 102 aa9.38□□□□□ -0.91
SLIRP-201ENST00000238688 COTL1Q14019 142 aa9.38□□□□□ -0.91
SLIRP-201ENST00000238688 CDPF1Q6NVV7 123 aa9.38□□□□□ -0.91
SLIRP-201ENST00000238688 MRPL52Q86TS9 123 aaKnown RBP9.38□□□□□ -0.91
SLIRP-201ENST00000238688 C20orf203Q8NBC4 194 aa9.38□□□□□ -0.91
SLIRP-201ENST00000238688 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
SLIRP-201ENST00000238688 PRADC1Q9BSG0 188 aa9.38□□□□□ -0.91
SLIRP-201ENST00000238688 A0A087WX48 190 aa9.37□□□□□ -0.91
SLIRP-201ENST00000238688 ODF1Q14990 250 aa9.37□□□□□ -0.91
SLIRP-201ENST00000238688 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
SLIRP-201ENST00000238688 ZNF479Q96JC4 524 aa9.37□□□□□ -0.91
SLIRP-201ENST00000238688 TIMM21Q9BVV7 248 aa9.37□□□□□ -0.91
SLIRP-201ENST00000238688 GTSF1LQ9H1H1 148 aa9.37□□□□□ -0.91
SLIRP-201ENST00000238688 SPANXA1Q9NS26 97 aa9.37□□□□□ -0.91
SLIRP-201ENST00000238688 TRGV4A0A0C4DH28 118 aa9.36□□□□□ -0.91
SLIRP-201ENST00000238688 GAGE12BA1L429 117 aa9.36□□□□□ -0.91
SLIRP-201ENST00000238688 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
SLIRP-201ENST00000238688 H7C423 109 aa9.36□□□□□ -0.91
SLIRP-201ENST00000238688 GAGE7O76087 117 aa9.36□□□□□ -0.91
SLIRP-201ENST00000238688 GAGE12FP0CL80 117 aa9.36□□□□□ -0.91
SLIRP-201ENST00000238688 GAGE12GP0CL81 117 aa9.36□□□□□ -0.91
SLIRP-201ENST00000238688 GAGE12IP0CL82 117 aa9.36□□□□□ -0.91
SLIRP-201ENST00000238688 SPATA45Q537H7 98 aa9.36□□□□□ -0.91
SLIRP-201ENST00000238688 DNAH1Q9P2D7 4330 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 IGHV3-73A0A0B4J1V6 119 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 F8VRH5 84 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 DPM2O94777 84 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 DDTP30046 118 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 UBE2D3P61077 147 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 UBE2D2P62837 147 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 SLC25A29Q8N8R3 303 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 Q8NAQ8 132 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 PMCHL2Q9BQD1 86 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 UQCR10Q9UDW1 63 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 PAM16Q9Y3D7 125 aa9.35□□□□□ -0.91
SLIRP-201ENST00000238688 IGKCP01834 107 aa9.34□□□□□ -0.91
SLIRP-201ENST00000238688 SPART-AS1P0CW21 52 aa9.34□□□□□ -0.91
SLIRP-201ENST00000238688 PMVKQ15126 192 aa9.34□□□□□ -0.91
SLIRP-201ENST00000238688 Q6ZSN1 163 aa9.34□□□□□ -0.91
SLIRP-201ENST00000238688 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
SLIRP-201ENST00000238688 C11orf68Q9H3H3 251 aaKnown RBP9.34□□□□□ -0.91
SLIRP-201ENST00000238688 RETNQ9HD89 108 aa9.34□□□□□ -0.91
SLIRP-201ENST00000238688 DKK2Q9UBU2 259 aa9.34□□□□□ -0.91
SLIRP-201ENST00000238688 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
SLIRP-201ENST00000238688 IGHV4-28A0A0C4DH34 117 aa9.33□□□□□ -0.92
SLIRP-201ENST00000238688 PCP4L1A6NKN8 68 aa9.33□□□□□ -0.92
SLIRP-201ENST00000238688 FHL2Q14192 279 aa9.33□□□□□ -0.92
SLIRP-201ENST00000238688 SH2D6Q7Z4S9 175 aa9.33□□□□□ -0.92
SLIRP-201ENST00000238688 PRO0255Q9UI72 69 aa9.33□□□□□ -0.92
SLIRP-201ENST00000238688 H0Y8G0 127 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 P0DMU3 169 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 FAM231AP0DMU4 169 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 FAM231CP0DMU5 169 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 LINC00694P0DN24 101 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 IGLC3P0DOY3 106 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 MRPS36P82909 103 aaKnown RBP9.32□□□□□ -0.92
SLIRP-201ENST00000238688 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 ZFAND6Q6FIF0 208 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 ZNRF2Q8NHG8 242 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
SLIRP-201ENST00000238688 ATP5G1P05496 136 aa9.31□□□□□ -0.92
SLIRP-201ENST00000238688 DAD1P61803 113 aa9.31□□□□□ -0.92
SLIRP-201ENST00000238688 NEGR1Q7Z3B1 354 aa9.31□□□□□ -0.92
SLIRP-201ENST00000238688 HHLA3Q9XRX5 114 aa9.31□□□□□ -0.92
SLIRP-201ENST00000238688 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
SLIRP-201ENST00000238688 HYDINQ4G0P3 5121 aa9.31□□□□□ -0.92
SLIRP-201ENST00000238688 PLECQ15149 4684 aaKnown RBP9.31□□□□□ -0.92
SLIRP-201ENST00000238688 TRAV26-1A0A087WT03 109 aa9.3□□□□□ -0.92
SLIRP-201ENST00000238688 DLEU1O43261 78 aa9.3□□□□□ -0.92
SLIRP-201ENST00000238688 ZNF25P17030 456 aaPredicted RBP9.3□□□□□ -0.92
SLIRP-201ENST00000238688 EMP1P54849 157 aa9.3□□□□□ -0.92
SLIRP-201ENST00000238688 LBHQ53QV2 105 aaPredicted RBP9.3□□□□□ -0.92
SLIRP-201ENST00000238688 CHCHD7Q9BUK0 85 aa9.3□□□□□ -0.92
SLIRP-201ENST00000238688 LCE6AA0A183 80 aa9.29□□□□□ -0.92
SLIRP-201ENST00000238688 PRSS29PA6NIE9 313 aa9.29□□□□□ -0.92
SLIRP-201ENST00000238688 DEFB130BP0DP73 79 aa9.29□□□□□ -0.92
SLIRP-201ENST00000238688 DEFB130AP0DP74 79 aa9.29□□□□□ -0.92
SLIRP-201ENST00000238688 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
SLIRP-201ENST00000238688 VCX2Q9H322 139 aa9.29□□□□□ -0.92
SLIRP-201ENST00000238688 PRO1933Q9H354 126 aa9.29□□□□□ -0.92
SLIRP-201ENST00000238688 CST9LQ9H4G1 147 aa9.29□□□□□ -0.92
SLIRP-201ENST00000238688 MRPL35Q9NZE8 188 aaKnown RBP9.29□□□□□ -0.92
SLIRP-201ENST00000238688 TRBV25-1A0A075B6N4 114 aa9.28□□□□□ -0.92
SLIRP-201ENST00000238688 H3BNG1 76 aa9.28□□□□□ -0.92
SLIRP-201ENST00000238688 COX8AP10176 69 aa9.28□□□□□ -0.92
SLIRP-201ENST00000238688 RPL39P62891 51 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms