RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 POLQO75417 2590 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 A0A0J9YX75 114 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 GP9P14770 177 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 PRCDQ00LT1 54 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 DAZ2Q13117 558 aaKnown RBP4.25□□□□□ -1.73
RFX4-201ENST00000229387 FAM222AQ5U5X8 452 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 DAZ3Q9NR90 486 aaKnown RBP4.25□□□□□ -1.73
RFX4-201ENST00000229387 Q9UF83 564 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 PIEZO1Q92508 2521 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 TRBV19A0A075B6N1 114 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 IGHV3OR16-10A0A075B7F0 116 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 IGHV3-35A0A0C4DH35 117 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 PAX4O43316 350 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 NDUFB3O43676 98 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 CGB3P0DN86 165 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 CGB7P0DN87 165 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 SAA4P35542 130 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 SUB1P53999 127 aaKnown RBP eCLIP4.25□□□□□ -1.73
RFX4-201ENST00000229387 LYZP61626 148 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 KLKP1Q107X0 134 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 KLHL30-AS1Q8NEE0 82 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 HIVEP3Q5T1R4 2406 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 FAM208BQ5VWN6 2430 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 RBMY1BA6NDE4 496 aaKnown RBP4.25□□□□□ -1.73
RFX4-201ENST00000229387 RBMY1EA6NEQ0 496 aaKnown RBP4.25□□□□□ -1.73
RFX4-201ENST00000229387 RBMY1DP0C7P1 496 aaKnown RBP4.25□□□□□ -1.73
RFX4-201ENST00000229387 RBMY1A1P0DJD3 496 aaKnown RBP4.25□□□□□ -1.73
RFX4-201ENST00000229387 RBMY1CP0DJD4 496 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 GATA1P15976 413 aaPredicted RBP4.25□□□□□ -1.73
RFX4-201ENST00000229387 RBMY1FQ15415 496 aaKnown RBP4.25□□□□□ -1.73
RFX4-201ENST00000229387 TMEM14CQ9P0S9 112 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 UBE2D4Q9Y2X8 147 aa4.25□□□□□ -1.73
RFX4-201ENST00000229387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.24□□□□□ -1.73
RFX4-201ENST00000229387 PLGLAQ15195 96 aa4.24□□□□□ -1.73
RFX4-201ENST00000229387 NUP37Q8NFH4 326 aa4.24□□□□□ -1.73
RFX4-201ENST00000229387 HRNRQ86YZ3 2850 aaPredicted RBP4.24□□□□□ -1.73
RFX4-201ENST00000229387 C11orf86A6NJI1 115 aa4.24□□□□□ -1.73
RFX4-201ENST00000229387 IBA57-AS1B1ANH7 110 aa4.24□□□□□ -1.73
RFX4-201ENST00000229387 ACACBO00763 2458 aa4.24□□□□□ -1.73
RFX4-201ENST00000229387 NDUFC1O43677 76 aa4.24□□□□□ -1.73
RFX4-201ENST00000229387 TIMM17BO60830 172 aa4.24□□□□□ -1.73
RFX4-201ENST00000229387 SNRPD3P62318 126 aaKnown RBP4.24□□□□□ -1.73
RFX4-201ENST00000229387 WT1-ASQ06250 92 aa4.24□□□□□ -1.73
RFX4-201ENST00000229387 MUSTN1Q8IVN3 82 aa4.24□□□□□ -1.73
RFX4-201ENST00000229387 IGHV1-58A0A0C4DH39 117 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 SDHAF1A6NFY7 115 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 SS18Q15532 418 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 DYNAPQ8N1N2 210 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 LYPD1Q8N2G4 141 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 NRACQ8N912 160 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 SCGB3A1Q96QR1 104 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 TM2D3Q9BRN9 247 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 UTP20O75691 2785 aaKnown RBP4.23□□□□□ -1.73
RFX4-201ENST00000229387 IGHV3-23P01764 117 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 PRSS2P07478 247 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 UBE2E1P51965 193 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 FAM30AQ9NZY2 134 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 IGKV1D-37A0A075B6S9 117 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 H7C2G1 150 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 PLA2G1BP04054 148 aaKnown RBP4.23□□□□□ -1.73
RFX4-201ENST00000229387 C14orf178Q8N769 122 aaPredicted RBP4.23□□□□□ -1.73
RFX4-201ENST00000229387 LINC00474Q9P2X8 69 aa4.23□□□□□ -1.73
RFX4-201ENST00000229387 PKD1L2Q7Z442 2459 aa4.22□□□□□ -1.73
RFX4-201ENST00000229387 USP9YO00507 2555 aaPredicted RBP4.22□□□□□ -1.73
RFX4-201ENST00000229387 CSPG4Q6UVK1 2322 aa4.22□□□□□ -1.73
RFX4-201ENST00000229387 IGLV4-69A0A075B6H9 119 aa4.22□□□□□ -1.73
RFX4-201ENST00000229387 I3L3M4 83 aa4.22□□□□□ -1.73
RFX4-201ENST00000229387 GAS8-AS1O95177 125 aa4.22□□□□□ -1.73
RFX4-201ENST00000229387 IGHV1-8P0DP01 117 aa4.22□□□□□ -1.73
RFX4-201ENST00000229387 ATP5EP2Q5VTU8 51 aa4.22□□□□□ -1.73
RFX4-201ENST00000229387 ZNF575Q86XF7 245 aa4.22□□□□□ -1.73
RFX4-201ENST00000229387 TSPEAR-AS2P59090 65 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 C20orf197Q8N268 126 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 Q8N2B8 174 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 CLEC2BQ92478 149 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 UBE2E2Q96LR5 201 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 NDUFA4L2Q9NRX3 87 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 MOB4Q9Y3A3 225 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 MYO18BQ8IUG5 2567 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 ITPR1Q14643 2758 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 TRAV8-3A0A0A6YYJ7 113 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 A0A1W2PPR1 153 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 LEPROTO15243 131 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 SH2D1AO60880 128 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 NXPH4O95158 308 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 RPL27AP46776 148 aaKnown RBP4.21□□□□□ -1.74
RFX4-201ENST00000229387 CD164L2Q6UWJ8 174 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 ZNF843Q8N446 348 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
RFX4-201ENST00000229387 TRAV7A0A075B6U4 112 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 IGHV3OR16-13A0A075B7E8 117 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 IGHV3-74A0A0B4J1X5 117 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 TRAV13-2A0A0B4J235 113 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 TRBV10-3A0A0K0K1G6 114 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 IGIPA6NJ69 53 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 LGALS3P17931 250 aaKnown RBP4.2□□□□□ -1.74
RFX4-201ENST00000229387 BEAN1Q3B7T3 259 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 CELSR2Q9HCU4 2923 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 CREBBPQ92793 2442 aa4.2□□□□□ -1.74
RFX4-201ENST00000229387 IGHV1-69DA0A0B4J2H0 117 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms