RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 OPRPNQ99935 248 aaPredicted RBP16.22■□□□□ 0.19
CCDC9-201ENST00000221922 TRAV25A0A0B4J276 109 aa16.21■□□□□ 0.19
CCDC9-201ENST00000221922 MTURNQ8N3F0 131 aa16.21■□□□□ 0.19
CCDC9-201ENST00000221922 ITPR2Q14571 2701 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 TMEM223A0PJW6 202 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 TMEM238C9JI98 176 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 HTN1P15515 57 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 CFAP126Q5VTH2 177 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 LINC00467Q9BRT7 94 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 M0R2P5 195 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 LEPROTO15243 131 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 HIST2H2BDQ6DRA6 164 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 PTH2Q96A98 100 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 AKAP9Q99996 3911 aa16.2■□□□□ 0.18
CCDC9-201ENST00000221922 A8MWV9 139 aa16.19■□□□□ 0.18
CCDC9-201ENST00000221922 APOMO95445 188 aa16.19■□□□□ 0.18
CCDC9-201ENST00000221922 CD28P10747 220 aa16.19■□□□□ 0.18
CCDC9-201ENST00000221922 LGALS3P17931 250 aaKnown RBP16.19■□□□□ 0.18
CCDC9-201ENST00000221922 TSSC4Q9Y5U2 329 aaPredicted RBP16.19■□□□□ 0.18
CCDC9-201ENST00000221922 GAGE12HA6NDE8 117 aa16.18■□□□□ 0.18
CCDC9-201ENST00000221922 CFC1BP0CG36 223 aa16.18■□□□□ 0.18
CCDC9-201ENST00000221922 CFC1P0CG37 223 aa16.18■□□□□ 0.18
CCDC9-201ENST00000221922 CLUHP3Q96NS8 147 aa16.18■□□□□ 0.18
CCDC9-201ENST00000221922 LINC01006Q8NI28 216 aa16.18■□□□□ 0.18
CCDC9-201ENST00000221922 SPATA25Q9BR10 227 aa16.18■□□□□ 0.18
CCDC9-201ENST00000221922 CCL24O00175 119 aa16.17■□□□□ 0.18
CCDC9-201ENST00000221922 INSP01308 110 aa16.17■□□□□ 0.18
CCDC9-201ENST00000221922 LYRM7Q5U5X0 104 aa16.17■□□□□ 0.18
CCDC9-201ENST00000221922 SIGMAR1Q99720 223 aa16.17■□□□□ 0.18
CCDC9-201ENST00000221922 IGLV4-3A0A075B6K6 122 aa16.17■□□□□ 0.18
CCDC9-201ENST00000221922 ZNF22P17026 224 aaPredicted RBP16.17■□□□□ 0.18
CCDC9-201ENST00000221922 SMCPP49901 116 aaPredicted RBP16.17■□□□□ 0.18
CCDC9-201ENST00000221922 ATP6V0E2Q8NHE4 81 aa16.17■□□□□ 0.18
CCDC9-201ENST00000221922 HECTD1Q9ULT8 2610 aa16.16■□□□□ 0.18
CCDC9-201ENST00000221922 LOC107984156A0A0G2JMH3 177 aa16.16■□□□□ 0.18
CCDC9-201ENST00000221922 RHODO00212 210 aa16.16■□□□□ 0.18
CCDC9-201ENST00000221922 ARL17AQ8IVW1 177 aa16.16■□□□□ 0.18
CCDC9-201ENST00000221922 C11orf44Q8N8P7 122 aa16.16■□□□□ 0.18
CCDC9-201ENST00000221922 LINC01587Q99440 93 aa16.15■□□□□ 0.18
CCDC9-201ENST00000221922 A0A1W2PRX2 142 aa16.15■□□□□ 0.18
CCDC9-201ENST00000221922 PSMB2P49721 201 aa16.15■□□□□ 0.18
CCDC9-201ENST00000221922 C10orf126Q8N4M7 172 aa16.15■□□□□ 0.18
CCDC9-201ENST00000221922 ZNF418Q8TF45 676 aaPredicted RBP16.15■□□□□ 0.18
CCDC9-201ENST00000221922 CITED2Q99967 270 aaPredicted RBP16.15■□□□□ 0.18
CCDC9-201ENST00000221922 VCX2Q9H322 139 aa16.15■□□□□ 0.18
CCDC9-201ENST00000221922 PYGO1Q9Y3Y4 419 aa16.15■□□□□ 0.18
CCDC9-201ENST00000221922 SPXQ9BT56 116 aa16.14■□□□□ 0.17
CCDC9-201ENST00000221922 SCGB1A1P11684 91 aa16.14■□□□□ 0.17
CCDC9-201ENST00000221922 AZU1P20160 251 aa16.14■□□□□ 0.17
CCDC9-201ENST00000221922 INSL3P51460 131 aa16.14■□□□□ 0.17
CCDC9-201ENST00000221922 HILS1P60008 231 aa16.14■□□□□ 0.17
CCDC9-201ENST00000221922 C1QTNF4Q9BXJ3 329 aa16.14■□□□□ 0.17
CCDC9-201ENST00000221922 PRO1854Q9UHT4 67 aa16.13■□□□□ 0.17
CCDC9-201ENST00000221922 ACANP16112 2415 aa16.13■□□□□ 0.17
CCDC9-201ENST00000221922 TRBV20-1A0A075B6N2 111 aa16.12■□□□□ 0.17
CCDC9-201ENST00000221922 A0A0J9YXV3 536 aa16.12■□□□□ 0.17
CCDC9-201ENST00000221922 SFTA2Q6UW10 78 aa16.12■□□□□ 0.17
CCDC9-201ENST00000221922 GTSF1LQ9H1H1 148 aa16.12■□□□□ 0.17
CCDC9-201ENST00000221922 CRYBA4P53673 196 aa16.12■□□□□ 0.17
CCDC9-201ENST00000221922 ODF3L2Q3SX64 289 aa16.12■□□□□ 0.17
CCDC9-201ENST00000221922 FAM104AQ969W3 186 aa16.12■□□□□ 0.17
CCDC9-201ENST00000221922 NACAE9PAV3 2078 aa16.11■□□□□ 0.17
CCDC9-201ENST00000221922 FOXI1Q12951 378 aa16.11■□□□□ 0.17
CCDC9-201ENST00000221922 C11orf72Q8NBR9 251 aa16.11■□□□□ 0.17
CCDC9-201ENST00000221922 TNFRSF18Q9Y5U5 241 aa16.11■□□□□ 0.17
CCDC9-201ENST00000221922 ANK3Q12955 4377 aaKnown RBP16.11■□□□□ 0.17
CCDC9-201ENST00000221922 NF1P21359 2839 aa16.11■□□□□ 0.17
CCDC9-201ENST00000221922 IGHV3-73A0A0B4J1V6 119 aa16.1■□□□□ 0.17
CCDC9-201ENST00000221922 TCL1BO95988 128 aa16.1■□□□□ 0.17
CCDC9-201ENST00000221922 STHQ8IWL8 128 aa16.1■□□□□ 0.17
CCDC9-201ENST00000221922 NDUFA7O95182 113 aa16.09■□□□□ 0.17
CCDC9-201ENST00000221922 PRM2P04554 102 aa16.09■□□□□ 0.17
CCDC9-201ENST00000221922 BEAN1Q3B7T3 259 aa16.09■□□□□ 0.17
CCDC9-201ENST00000221922 A4D1N5 150 aa16.08■□□□□ 0.16
CCDC9-201ENST00000221922 PROK1P58294 105 aa16.08■□□□□ 0.16
CCDC9-201ENST00000221922 MRPS36P82909 103 aaKnown RBP16.08■□□□□ 0.16
CCDC9-201ENST00000221922 SBSPONQ8IVN8 264 aa16.08■□□□□ 0.16
CCDC9-201ENST00000221922 EIF4EBP3O60516 100 aaPredicted RBP16.07■□□□□ 0.16
CCDC9-201ENST00000221922 IGHV3-64A0A075B6Q5 118 aa16.06■□□□□ 0.16
CCDC9-201ENST00000221922 A0A0B4J2C4 111 aa16.06■□□□□ 0.16
CCDC9-201ENST00000221922 TMEM263Q8WUH6 116 aaKnown RBP16.06■□□□□ 0.16
CCDC9-201ENST00000221922 DNAJC30Q96LL9 226 aa16.06■□□□□ 0.16
CCDC9-201ENST00000221922 SMAGPQ0VAQ4 97 aa16.06■□□□□ 0.16
CCDC9-201ENST00000221922 XCL2Q9UBD3 114 aa16.06■□□□□ 0.16
CCDC9-201ENST00000221922 CMC4P56277 68 aaPredicted RBP16.05■□□□□ 0.16
CCDC9-201ENST00000221922 RS1O15537 224 aa16.04■□□□□ 0.16
CCDC9-201ENST00000221922 IGHV3-53P01767 116 aa16.04■□□□□ 0.16
CCDC9-201ENST00000221922 IGHV3-33P01772 117 aa16.04■□□□□ 0.16
CCDC9-201ENST00000221922 IGHV3-30-3P0DP02 117 aa16.04■□□□□ 0.16
CCDC9-201ENST00000221922 MUSTN1Q8IVN3 82 aa16.04■□□□□ 0.16
CCDC9-201ENST00000221922 A0A0J9YXY3 114 aa16.04■□□□□ 0.16
CCDC9-201ENST00000221922 MTORP42345 2549 aa16.03■□□□□ 0.16
CCDC9-201ENST00000221922 Q6ZSN1 163 aa16.03■□□□□ 0.16
CCDC9-201ENST00000221922 TEN1Q86WV5 123 aa16.03■□□□□ 0.16
CCDC9-201ENST00000221922 SMR3AQ99954 134 aa16.03■□□□□ 0.16
CCDC9-201ENST00000221922 CHCHD7Q9BUK0 85 aa16.03■□□□□ 0.16
CCDC9-201ENST00000221922 TIMM21Q9BVV7 248 aa16.03■□□□□ 0.16
CCDC9-201ENST00000221922 WNK1Q9H4A3 2382 aa16.02■□□□□ 0.16
CCDC9-201ENST00000221922 SCGB1C2P0DMR2 95 aa16.02■□□□□ 0.15
CCDC9-201ENST00000221922 SPANXA1Q9NS26 97 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms