RNA–Protein interactions for RNA: ENST00000219252.9

POLR2C-201, Transcript of RNA polymerase II subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2C, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-201ENST00000219252 H3BRM9 83 aa13.3□□□□□ -0.28
POLR2C-201ENST00000219252 RS1O15537 224 aa13.3□□□□□ -0.28
POLR2C-201ENST00000219252 NAA38Q9BRA0 125 aaKnown RBP13.3□□□□□ -0.28
POLR2C-201ENST00000219252 TNFRSF18Q9Y5U5 241 aa13.3□□□□□ -0.28
POLR2C-201ENST00000219252 RNASE8Q8TDE3 154 aaKnown RBP13.29□□□□□ -0.28
POLR2C-201ENST00000219252 FAM104AQ969W3 186 aa13.29□□□□□ -0.28
POLR2C-201ENST00000219252 IGHV3-53P01767 116 aa13.28□□□□□ -0.28
POLR2C-201ENST00000219252 CEND1Q8N111 149 aa13.28□□□□□ -0.28
POLR2C-201ENST00000219252 RAB37Q96AX2 223 aa13.28□□□□□ -0.28
POLR2C-201ENST00000219252 IGLV4-3A0A075B6K6 122 aa13.28□□□□□ -0.28
POLR2C-201ENST00000219252 TM2D2Q9BX73 214 aa13.28□□□□□ -0.28
POLR2C-201ENST00000219252 C9orf118A6NHY6 69 aa13.27□□□□□ -0.28
POLR2C-201ENST00000219252 RHODO00212 210 aa13.27□□□□□ -0.28
POLR2C-201ENST00000219252 PAPPA-AS1Q5QFB9 102 aa13.27□□□□□ -0.28
POLR2C-201ENST00000219252 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
POLR2C-201ENST00000219252 K7ERJ3 54 aa13.26□□□□□ -0.29
POLR2C-201ENST00000219252 CEMP1Q6PRD7 247 aaPredicted RBP13.26□□□□□ -0.29
POLR2C-201ENST00000219252 IGHV3-38A0A0C4DH36 116 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 H3BUT2 72 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 RPL35AP18077 110 aaKnown RBP13.25□□□□□ -0.29
POLR2C-201ENST00000219252 TSPEAR-AS2P59090 65 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 TMEM170BQ5T4T1 132 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 PLEKHB2Q96CS7 222 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 CHCHD7Q9BUK0 85 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 TRBV7-3A0A075B6L6 115 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 ZNF815PA8K554 130 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 Q6ZTI0 123 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 NFE4Q86UQ8 179 aa13.25□□□□□ -0.29
POLR2C-201ENST00000219252 PHLDA1Q8WV24 401 aaPredicted RBP13.24□□□□□ -0.29
POLR2C-201ENST00000219252 ZNF479Q96JC4 524 aa13.24□□□□□ -0.29
POLR2C-201ENST00000219252 FAM110AQ9BQ89 295 aa13.24□□□□□ -0.29
POLR2C-201ENST00000219252 INAFM1C9JVW0 142 aa13.24□□□□□ -0.29
POLR2C-201ENST00000219252 CMC4P56277 68 aaPredicted RBP13.24□□□□□ -0.29
POLR2C-201ENST00000219252 TMEM263Q8WUH6 116 aaKnown RBP13.24□□□□□ -0.29
POLR2C-201ENST00000219252 HIST1H4GQ99525 98 aa13.24□□□□□ -0.29
POLR2C-201ENST00000219252 C2CD3Q4AC94 2353 aa13.23□□□□□ -0.29
POLR2C-201ENST00000219252 TAL2Q16559 108 aa13.23□□□□□ -0.29
POLR2C-201ENST00000219252 OR4C5Q8NGB2 326 aa13.23□□□□□ -0.29
POLR2C-201ENST00000219252 NHP2Q9NX24 153 aaKnown RBP13.23□□□□□ -0.29
POLR2C-201ENST00000219252 PYGO1Q9Y3Y4 419 aa13.23□□□□□ -0.29
POLR2C-201ENST00000219252 NSD1Q96L73 2696 aaPredicted RBP13.23□□□□□ -0.29
POLR2C-201ENST00000219252 SMIM13P0DJ93 91 aa13.22□□□□□ -0.29
POLR2C-201ENST00000219252 NDUFA11Q86Y39 141 aa13.22□□□□□ -0.29
POLR2C-201ENST00000219252 VCX2Q9H322 139 aa13.22□□□□□ -0.29
POLR2C-201ENST00000219252 A0A0J9YXV3 536 aa13.22□□□□□ -0.29
POLR2C-201ENST00000219252 PLAC8L1A1L4L8 177 aa13.22□□□□□ -0.29
POLR2C-201ENST00000219252 HERVK_113P61574 105 aa13.22□□□□□ -0.29
POLR2C-201ENST00000219252 RNASE13Q5GAN3 156 aaKnown RBP13.22□□□□□ -0.29
POLR2C-201ENST00000219252 DNAJC30Q96LL9 226 aa13.22□□□□□ -0.29
POLR2C-201ENST00000219252 FN1P02751 2386 aaKnown RBP13.21□□□□□ -0.29
POLR2C-201ENST00000219252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.21□□□□□ -0.29
POLR2C-201ENST00000219252 IGKV2-29A2NJV5 120 aaPredicted RBP13.21□□□□□ -0.29
POLR2C-201ENST00000219252 CSNK1G2-AS1Q8NCQ2 148 aa13.21□□□□□ -0.29
POLR2C-201ENST00000219252 AMELXQ99217 191 aa13.21□□□□□ -0.29
POLR2C-201ENST00000219252 ZNF22P17026 224 aaPredicted RBP13.2□□□□□ -0.3
POLR2C-201ENST00000219252 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
POLR2C-201ENST00000219252 LINC00482Q8N8I6 264 aa13.2□□□□□ -0.3
POLR2C-201ENST00000219252 UBE2D4Q9Y2X8 147 aa13.2□□□□□ -0.3
POLR2C-201ENST00000219252 TMEM223A0PJW6 202 aa13.19□□□□□ -0.3
POLR2C-201ENST00000219252 SPATA3Q8NHX4 192 aa13.19□□□□□ -0.3
POLR2C-201ENST00000219252 PF4P02776 101 aa13.19□□□□□ -0.3
POLR2C-201ENST00000219252 SCGB1D4Q6XE38 83 aa13.19□□□□□ -0.3
POLR2C-201ENST00000219252 VWFP04275 2813 aa13.18□□□□□ -0.3
POLR2C-201ENST00000219252 A0A1W2PPM0 123 aa13.17□□□□□ -0.3
POLR2C-201ENST00000219252 IGHV3-64A0A075B6Q5 118 aa13.17□□□□□ -0.3
POLR2C-201ENST00000219252 GAGE10A6NGK3 116 aa13.17□□□□□ -0.3
POLR2C-201ENST00000219252 DAZ2Q13117 558 aaKnown RBP13.17□□□□□ -0.3
POLR2C-201ENST00000219252 HIVEP1P15822 2718 aa13.17□□□□□ -0.3
POLR2C-201ENST00000219252 TRAV4A0A0B4J268 109 aa13.16□□□□□ -0.3
POLR2C-201ENST00000219252 A0A0J9YY99 117 aa13.16□□□□□ -0.3
POLR2C-201ENST00000219252 J3QQQ9 107 aa13.16□□□□□ -0.3
POLR2C-201ENST00000219252 C12orf74Q32Q52 190 aa13.16□□□□□ -0.3
POLR2C-201ENST00000219252 Q6ZUT4 128 aa13.16□□□□□ -0.3
POLR2C-201ENST00000219252 C16orf74Q96GX8 76 aa13.16□□□□□ -0.3
POLR2C-201ENST00000219252 SPANXA1Q9NS26 97 aa13.16□□□□□ -0.3
POLR2C-201ENST00000219252 K7EP34 96 aa13.15□□□□□ -0.3
POLR2C-201ENST00000219252 K7EQD1 137 aa13.15□□□□□ -0.3
POLR2C-201ENST00000219252 MRPS36P82909 103 aaKnown RBP13.15□□□□□ -0.3
POLR2C-201ENST00000219252 SAMD5Q5TGI4 173 aa13.15□□□□□ -0.3
POLR2C-201ENST00000219252 SLC25A29Q8N8R3 303 aa13.15□□□□□ -0.3
POLR2C-201ENST00000219252 CRYBA4P53673 196 aa13.14□□□□□ -0.31
POLR2C-201ENST00000219252 GAGE12BA1L429 117 aa13.14□□□□□ -0.31
POLR2C-201ENST00000219252 LEPROTO15243 131 aa13.14□□□□□ -0.31
POLR2C-201ENST00000219252 GAGE7O76087 117 aa13.14□□□□□ -0.31
POLR2C-201ENST00000219252 GAGE12FP0CL80 117 aa13.14□□□□□ -0.31
POLR2C-201ENST00000219252 GAGE12GP0CL81 117 aa13.14□□□□□ -0.31
POLR2C-201ENST00000219252 GAGE12IP0CL82 117 aa13.14□□□□□ -0.31
POLR2C-201ENST00000219252 C1QTNF4Q9BXJ3 329 aa13.14□□□□□ -0.31
POLR2C-201ENST00000219252 TENM1Q9UKZ4 2725 aa13.13□□□□□ -0.31
POLR2C-201ENST00000219252 OR5A1Q8NGJ0 315 aa13.13□□□□□ -0.31
POLR2C-201ENST00000219252 A0A1B0GWB2 263 aa13.12□□□□□ -0.31
POLR2C-201ENST00000219252 LGALS3P17931 250 aaKnown RBP13.12□□□□□ -0.31
POLR2C-201ENST00000219252 IGLL5B9A064 214 aa13.12□□□□□ -0.31
POLR2C-201ENST00000219252 SRSF9Q13242 221 aaKnown RBP eCLIP13.12□□□□□ -0.31
POLR2C-201ENST00000219252 RRN3P1Q2M238 152 aa13.12□□□□□ -0.31
POLR2C-201ENST00000219252 NTM-AS1Q6ZSK4 140 aa13.12□□□□□ -0.31
POLR2C-201ENST00000219252 SPCS1Q9Y6A9 102 aa13.12□□□□□ -0.31
POLR2C-201ENST00000219252 TRBV10-1A0A0K0K1A3 114 aa13.11□□□□□ -0.31
POLR2C-201ENST00000219252 LINC00694P0DN24 101 aa13.11□□□□□ -0.31
POLR2C-201ENST00000219252 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms