RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 TMEM243Q9BU79 118 aa9.04□□□□□ -0.96
TIMP1-201ENST00000218388 NXT2Q9NPJ8 142 aaKnown RBP9.04□□□□□ -0.96
TIMP1-201ENST00000218388 UBE2L6O14933 153 aa9.03□□□□□ -0.96
TIMP1-201ENST00000218388 TRGC2P03986 189 aa9.03□□□□□ -0.96
TIMP1-201ENST00000218388 NTM-AS1Q6ZSK4 140 aa9.03□□□□□ -0.96
TIMP1-201ENST00000218388 Q8N8P6 123 aa9.03□□□□□ -0.96
TIMP1-201ENST00000218388 CHCHD5Q9BSY4 110 aa9.03□□□□□ -0.96
TIMP1-201ENST00000218388 Q9H8V8 135 aa9.03□□□□□ -0.96
TIMP1-201ENST00000218388 LCE6AA0A183 80 aa9.02□□□□□ -0.97
TIMP1-201ENST00000218388 K7EMI3 77 aa9.02□□□□□ -0.97
TIMP1-201ENST00000218388 TSHBP01222 138 aa9.02□□□□□ -0.97
TIMP1-201ENST00000218388 WFDC10BQ8IUB3 73 aa9.02□□□□□ -0.97
TIMP1-201ENST00000218388 PRSS3P2Q8NHM4 247 aa9.02□□□□□ -0.97
TIMP1-201ENST00000218388 A0A087WX48 190 aa9.01□□□□□ -0.97
TIMP1-201ENST00000218388 H7C423 109 aa9.01□□□□□ -0.97
TIMP1-201ENST00000218388 K7EP13 123 aa9.01□□□□□ -0.97
TIMP1-201ENST00000218388 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
TIMP1-201ENST00000218388 DEFB104AQ8WTQ1 72 aa9.01□□□□□ -0.97
TIMP1-201ENST00000218388 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
TIMP1-201ENST00000218388 CHCHD7Q9BUK0 85 aa9.01□□□□□ -0.97
TIMP1-201ENST00000218388 IGLV2-18A0A075B6J9 118 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 TRAV9-2A0A087WT02 112 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 TMEM262E9PQX1 116 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 DNAH10OSP0CZ25 163 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
TIMP1-201ENST00000218388 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 TTC32Q5I0X7 151 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 LINC01556Q5JQF7 62 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 FA2HQ7L5A8 372 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 NIT1Q86X76 327 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 C10orf126Q8N4M7 172 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 C18orf32Q8TCD1 76 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 ALMS1Q8TCU4 4167 aa9□□□□□ -0.97
TIMP1-201ENST00000218388 ESDP10768 282 aa8.99□□□□□ -0.97
TIMP1-201ENST00000218388 G0S2P27469 103 aa8.99□□□□□ -0.97
TIMP1-201ENST00000218388 RAB5BP61020 215 aa8.99□□□□□ -0.97
TIMP1-201ENST00000218388 GAGE6Q13070 117 aa8.99□□□□□ -0.97
TIMP1-201ENST00000218388 LAGE3Q14657 143 aa8.98□□□□□ -0.97
TIMP1-201ENST00000218388 AMMECR1LQ6DCA0 310 aa8.98□□□□□ -0.97
TIMP1-201ENST00000218388 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.97□□□□□ -0.97
TIMP1-201ENST00000218388 IGKV2-29A2NJV5 120 aaPredicted RBP8.97□□□□□ -0.97
TIMP1-201ENST00000218388 IGHV3-30P01768 117 aa8.97□□□□□ -0.97
TIMP1-201ENST00000218388 IGHV3-33P01772 117 aa8.97□□□□□ -0.97
TIMP1-201ENST00000218388 IGHV3-30-3P0DP02 117 aa8.97□□□□□ -0.97
TIMP1-201ENST00000218388 IGHV3-30-5P0DP03 117 aa8.97□□□□□ -0.97
TIMP1-201ENST00000218388 AP5S1Q9NUS5 200 aa8.97□□□□□ -0.97
TIMP1-201ENST00000218388 NBDYA0A0U1RRE5 68 aa8.96□□□□□ -0.98
TIMP1-201ENST00000218388 A0A1B0GUV1 79 aa8.96□□□□□ -0.98
TIMP1-201ENST00000218388 ZNF25P17030 456 aaPredicted RBP8.96□□□□□ -0.98
TIMP1-201ENST00000218388 MPV17L2Q567V2 206 aa8.96□□□□□ -0.98
TIMP1-201ENST00000218388 RNASEKQ6P5S7 137 aaKnown RBP8.96□□□□□ -0.98
TIMP1-201ENST00000218388 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
TIMP1-201ENST00000218388 C20orf203Q8NBC4 194 aa8.96□□□□□ -0.98
TIMP1-201ENST00000218388 TMEM101Q96IK0 257 aa8.96□□□□□ -0.98
TIMP1-201ENST00000218388 LYSTQ99698 3801 aa8.96□□□□□ -0.98
TIMP1-201ENST00000218388 LINC01546A6NGU7 62 aa8.95□□□□□ -0.98
TIMP1-201ENST00000218388 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
TIMP1-201ENST00000218388 C1orf196B1AJZ1 125 aa8.95□□□□□ -0.98
TIMP1-201ENST00000218388 LINC00614P0C842 121 aa8.95□□□□□ -0.98
TIMP1-201ENST00000218388 FGF6P10767 208 aa8.95□□□□□ -0.98
TIMP1-201ENST00000218388 RBX1P62877 108 aa8.95□□□□□ -0.98
TIMP1-201ENST00000218388 Q0VG73 95 aa8.95□□□□□ -0.98
TIMP1-201ENST00000218388 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
TIMP1-201ENST00000218388 BTF3P20290 206 aaKnown RBP8.94□□□□□ -0.98
TIMP1-201ENST00000218388 DGAT2L7PQ6IED9 249 aa8.94□□□□□ -0.98
TIMP1-201ENST00000218388 MRPL52Q86TS9 123 aaKnown RBP8.94□□□□□ -0.98
TIMP1-201ENST00000218388 OR5A1Q8NGJ0 315 aa8.94□□□□□ -0.98
TIMP1-201ENST00000218388 CHCHD1Q96BP2 118 aaKnown RBP8.94□□□□□ -0.98
TIMP1-201ENST00000218388 CRPP02741 224 aa8.93□□□□□ -0.98
TIMP1-201ENST00000218388 ANGP03950 147 aaKnown RBP8.93□□□□□ -0.98
TIMP1-201ENST00000218388 C2orf66Q6UXQ4 117 aa8.93□□□□□ -0.98
TIMP1-201ENST00000218388 Q8N976 141 aa8.93□□□□□ -0.98
TIMP1-201ENST00000218388 TIMM21Q9BVV7 248 aa8.93□□□□□ -0.98
TIMP1-201ENST00000218388 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
TIMP1-201ENST00000218388 KLK12Q9UKR0 248 aa8.93□□□□□ -0.98
TIMP1-201ENST00000218388 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
TIMP1-201ENST00000218388 VPS13DQ5THJ4 4388 aa8.93□□□□□ -0.98
TIMP1-201ENST00000218388 IBA57-AS1B1ANH7 110 aa8.92□□□□□ -0.98
TIMP1-201ENST00000218388 M0R2N4 97 aa8.92□□□□□ -0.98
TIMP1-201ENST00000218388 RPL39P62891 51 aaKnown RBP8.92□□□□□ -0.98
TIMP1-201ENST00000218388 Q8N3U1 123 aa8.92□□□□□ -0.98
TIMP1-201ENST00000218388 UBE2D4Q9Y2X8 147 aa8.92□□□□□ -0.98
TIMP1-201ENST00000218388 TRAV8-3A0A0A6YYJ7 113 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 J3QL48 77 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST1H2BKO60814 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST1H2BJP06899 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST1H2BOP23527 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST1H2BBP33778 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST1H2BDP58876 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST1H2BCP62807 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST2H2BEQ16778 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.91□□□□□ -0.98
TIMP1-201ENST00000218388 Q6ZR54 194 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST1H2BHQ93079 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST1H2BNQ99877 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 HIST1H2BMQ99879 126 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 DNAH1Q9P2D7 4330 aa8.91□□□□□ -0.98
TIMP1-201ENST00000218388 IGLV4-60A0A075B6I1 120 aa8.9□□□□□ -0.98
TIMP1-201ENST00000218388 HSBP1O75506 76 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms