RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 GAGE12BA1L429 117 aa12.31□□□□□ -0.44
RABGGTA-201ENST00000216840 GAGE7O76087 117 aa12.31□□□□□ -0.44
RABGGTA-201ENST00000216840 GAGE12FP0CL80 117 aa12.31□□□□□ -0.44
RABGGTA-201ENST00000216840 GAGE12GP0CL81 117 aa12.31□□□□□ -0.44
RABGGTA-201ENST00000216840 GAGE12IP0CL82 117 aa12.31□□□□□ -0.44
RABGGTA-201ENST00000216840 TTTY13Q9BZ97 58 aa12.31□□□□□ -0.44
RABGGTA-201ENST00000216840 IGHV3-38A0A0C4DH36 116 aa12.3□□□□□ -0.44
RABGGTA-201ENST00000216840 K7EQD1 137 aa12.3□□□□□ -0.44
RABGGTA-201ENST00000216840 SIVA1O15304 175 aa12.3□□□□□ -0.44
RABGGTA-201ENST00000216840 PHLDA1Q8WV24 401 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-201ENST00000216840 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
RABGGTA-201ENST00000216840 KRTAP24-1Q3LI83 254 aa12.3□□□□□ -0.44
RABGGTA-201ENST00000216840 ZNRF2Q8NHG8 242 aa12.3□□□□□ -0.44
RABGGTA-201ENST00000216840 TRGV2A0A075B6R0 118 aa12.29□□□□□ -0.44
RABGGTA-201ENST00000216840 C11orf86A6NJI1 115 aa12.29□□□□□ -0.44
RABGGTA-201ENST00000216840 BVES-AS1Q5T3Y7 98 aa12.29□□□□□ -0.44
RABGGTA-201ENST00000216840 C12orf54Q6X4T0 127 aa12.29□□□□□ -0.44
RABGGTA-201ENST00000216840 PYGO1Q9Y3Y4 419 aa12.29□□□□□ -0.44
RABGGTA-201ENST00000216840 IGLV4-3A0A075B6K6 122 aa12.28□□□□□ -0.44
RABGGTA-201ENST00000216840 TRBV7-3A0A075B6L6 115 aa12.28□□□□□ -0.44
RABGGTA-201ENST00000216840 TRBV10-1A0A0K0K1A3 114 aa12.28□□□□□ -0.44
RABGGTA-201ENST00000216840 WIPF1O43516 503 aa12.28□□□□□ -0.44
RABGGTA-201ENST00000216840 EMP1P54849 157 aa12.28□□□□□ -0.44
RABGGTA-201ENST00000216840 SLC25A29Q8N8R3 303 aa12.28□□□□□ -0.44
RABGGTA-201ENST00000216840 COTL1Q14019 142 aa12.28□□□□□ -0.44
RABGGTA-201ENST00000216840 PAPPA-AS1Q5QFB9 102 aa12.28□□□□□ -0.44
RABGGTA-201ENST00000216840 FAM104AQ969W3 186 aa12.27□□□□□ -0.45
RABGGTA-201ENST00000216840 X6R8D5 127 aa12.27□□□□□ -0.45
RABGGTA-201ENST00000216840 CIDEAO60543 219 aa12.26□□□□□ -0.45
RABGGTA-201ENST00000216840 TMEM97Q5BJF2 176 aa12.26□□□□□ -0.45
RABGGTA-201ENST00000216840 MAPKAPK5-AS1Q8N8E1 139 aa12.26□□□□□ -0.45
RABGGTA-201ENST00000216840 RPL36AP83881 106 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-201ENST00000216840 RPL36ALQ969Q0 106 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-201ENST00000216840 TRRAPQ9Y4A5 3859 aa12.26□□□□□ -0.45
RABGGTA-201ENST00000216840 TRAV8-6A0A0B4J262 113 aa12.25□□□□□ -0.45
RABGGTA-201ENST00000216840 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-201ENST00000216840 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-201ENST00000216840 E9PLD3 99 aa12.25□□□□□ -0.45
RABGGTA-201ENST00000216840 CEMP1Q6PRD7 247 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-201ENST00000216840 KIR2DL5BQ8NHK3 375 aa12.25□□□□□ -0.45
RABGGTA-201ENST00000216840 VCX2Q9H322 139 aa12.25□□□□□ -0.45
RABGGTA-201ENST00000216840 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
RABGGTA-201ENST00000216840 UBE2D3P61077 147 aa12.24□□□□□ -0.45
RABGGTA-201ENST00000216840 UBE2D2P62837 147 aa12.24□□□□□ -0.45
RABGGTA-201ENST00000216840 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
RABGGTA-201ENST00000216840 AMELXQ99217 191 aa12.24□□□□□ -0.45
RABGGTA-201ENST00000216840 HIGD1BQ9P298 99 aa12.24□□□□□ -0.45
RABGGTA-201ENST00000216840 UBE2D4Q9Y2X8 147 aa12.24□□□□□ -0.45
RABGGTA-201ENST00000216840 TRBV25-1A0A075B6N4 114 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 NPSP0C0P6 89 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 GAGE1Q13065 139 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 GAGE4Q13068 117 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 GAGE5Q13069 117 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 OR11H2Q8NH07 326 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 SPANXA1Q9NS26 97 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 TRBV6-4A0A1B0GX49 114 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 CRYBA4P53673 196 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 APOC4P55056 127 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 HSD52Q0P140 79 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 DAZ4Q86SG3 579 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 LINC00612Q8N6U2 182 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 PRADC1Q9BSG0 188 aa12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 DAZ3Q9NR90 486 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-201ENST00000216840 TRGV4A0A0C4DH28 118 aa12.22□□□□□ -0.45
RABGGTA-201ENST00000216840 FHL2Q14192 279 aa12.22□□□□□ -0.45
RABGGTA-201ENST00000216840 CHAC1Q9BUX1 264 aa12.22□□□□□ -0.45
RABGGTA-201ENST00000216840 DEFB135Q30KP9 77 aa12.21□□□□□ -0.45
RABGGTA-201ENST00000216840 TMEM170BQ5T4T1 132 aa12.21□□□□□ -0.45
RABGGTA-201ENST00000216840 LOC100131303A0A0U1RQF7 123 aa12.2□□□□□ -0.46
RABGGTA-201ENST00000216840 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
RABGGTA-201ENST00000216840 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
RABGGTA-201ENST00000216840 ZNF25P17030 456 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-201ENST00000216840 NTM-AS1Q6ZSK4 140 aa12.2□□□□□ -0.46
RABGGTA-201ENST00000216840 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
RABGGTA-201ENST00000216840 HERVK_113P61574 105 aa12.2□□□□□ -0.46
RABGGTA-201ENST00000216840 MYMXA0A1B0GTQ4 84 aa12.19□□□□□ -0.46
RABGGTA-201ENST00000216840 RNASE13Q5GAN3 156 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-201ENST00000216840 Q6ZUT4 128 aa12.18□□□□□ -0.46
RABGGTA-201ENST00000216840 Q6ZVH6 145 aa12.18□□□□□ -0.46
RABGGTA-201ENST00000216840 ORAOV1Q8WV07 137 aa12.18□□□□□ -0.46
RABGGTA-201ENST00000216840 TIMM21Q9BVV7 248 aa12.18□□□□□ -0.46
RABGGTA-201ENST00000216840 SEC11AP67812 179 aa12.18□□□□□ -0.46
RABGGTA-201ENST00000216840 C3orf56Q8N813 242 aa12.18□□□□□ -0.46
RABGGTA-201ENST00000216840 IGHV4-30-4P0DP06 118 aa12.17□□□□□ -0.46
RABGGTA-201ENST00000216840 ZNF22P17026 224 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-201ENST00000216840 PRIMA1Q86XR5 153 aa12.17□□□□□ -0.46
RABGGTA-201ENST00000216840 MRPS36P82909 103 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-201ENST00000216840 OXLD1Q5BKU9 147 aa12.17□□□□□ -0.46
RABGGTA-201ENST00000216840 SBSPONQ8IVN8 264 aa12.17□□□□□ -0.46
RABGGTA-201ENST00000216840 TMEM223A0PJW6 202 aa12.16□□□□□ -0.46
RABGGTA-201ENST00000216840 TAX1BP3O14907 124 aa12.16□□□□□ -0.46
RABGGTA-201ENST00000216840 LINC00694P0DN24 101 aa12.16□□□□□ -0.46
RABGGTA-201ENST00000216840 GTSF1LQ9H1H1 148 aa12.16□□□□□ -0.46
RABGGTA-201ENST00000216840 FAM222AQ5U5X8 452 aa12.15□□□□□ -0.46
RABGGTA-201ENST00000216840 SHISA2Q6UWI4 295 aa12.15□□□□□ -0.46
RABGGTA-201ENST00000216840 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
RABGGTA-201ENST00000216840 NBEAL2Q6ZNJ1 2754 aa12.15□□□□□ -0.46
RABGGTA-201ENST00000216840 ZNF815PA8K554 130 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms