RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 COL1A1P02452 1464 aaPredicted RBP0.27□□□□□ -2.37
CDKN3-201ENST00000216414 GRIN2AQ12879 1464 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ABCC2Q92887 1545 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ADGRB2O60241 1585 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ERCC6L2Q5T890 1561 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 TRPM1Q7Z4N2 1603 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ADAMTS7Q9UKP4 1686 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.27□□□□□ -2.37
CDKN3-201ENST00000216414 NWD2Q9ULI1 1742 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 KIAA1549LQ6ZVL6 1849 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 ANK1P16157 1881 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 FER1L6Q2WGJ9 1857 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 TRPM7Q96QT4 1865 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 CDK5RAP2Q96SN8 1893 aa0.27□□□□□ -2.37
CDKN3-201ENST00000216414 SDK1Q7Z5N4 2213 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 TRBV7-3A0A075B6L6 115 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 TRGV1A0A0A0MS02 117 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 TRBV7-4A0A0J9YYF1 115 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 FAM236AA0A1B0GUQ0 79 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 FAM236BA0A1B0GV22 79 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 A0A1B0GV90 55 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 KANTRA0A1W2PQU2 76 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 D6R8Y8 96 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 HCG22E2RYF7 251 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 H0YGG7 62 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 K7EP13 123 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 M0R143 59 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 CCL22O00626 93 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 GNGT2O14610 69 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 PITX3O75364 302 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 IGLV1-51P01701 117 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 ASIPP42127 132 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 PSMG4Q5JS54 123 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 Q5VV11 94 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 Q6JHZ5 121 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 DEFB132Q7Z7B7 95 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 MUSTN1Q8IVN3 82 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 Q8IZM0 81 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 Q8N6K4 173 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 TMEM263Q8WUH6 116 aaKnown RBP0.26□□□□□ -2.37
CDKN3-201ENST00000216414 TSLPQ969D9 159 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 DPH3Q96FX2 82 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 CARD19Q96LW7 228 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 PMCHL2Q9BQD1 86 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 RABAC1Q9UI14 185 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 ROCK2O75116 1388 aaKnown RBP0.26□□□□□ -2.37
CDKN3-201ENST00000216414 CPDO75976 1380 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 CCNB3Q8WWL7 1395 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 PTPRGP23470 1445 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 ZCCHC6Q5VYS8 1495 aaKnown RBP0.26□□□□□ -2.37
CDKN3-201ENST00000216414 SETBP1Q9Y6X0 1596 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 CEP152O94986 1710 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 AFDNP55196 1824 aaKnown RBP0.26□□□□□ -2.37
CDKN3-201ENST00000216414 PARP14Q460N5 1801 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 MYH13Q9UKX3 1938 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 PI4KAP42356 2102 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 TET1Q8NFU7 2136 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 TECTAO75443 2155 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 MYO7AQ13402 2215 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 UNC13CQ8NB66 2214 aa0.26□□□□□ -2.37
CDKN3-201ENST00000216414 MUC4Q99102 2169 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 NCOA6Q14686 2063 aaPredicted RBP0.25□□□□□ -2.37
CDKN3-201ENST00000216414 CASP8AP2Q9UKL3 1982 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 MYH7P12883 1935 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 ALPK3Q96L96 1907 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 KIF13AQ9H1H9 1805 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 RBBP6Q7Z6E9 1792 aaKnown RBP0.25□□□□□ -2.37
CDKN3-201ENST00000216414 LRRC37A2A6NM11 1700 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 WDR90Q96KV7 1748 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 UNC13BO14795 1591 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 KCPQ6ZWJ8 1503 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 CPSF1Q10570 1443 aaKnown RBP0.25□□□□□ -2.37
CDKN3-201ENST00000216414 MYOM3Q5VTT5 1437 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 SPTY2D1-AS1A0A0U1RR47 76 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 SPAARA0A1B0GVQ0 90 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 IGLC7A0M8Q6 106 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 M0R129 80 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 DLEU1O43261 78 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 MRPL33O75394 65 aaKnown RBP0.25□□□□□ -2.37
CDKN3-201ENST00000216414 LEPROTL1O95214 131 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 ACYP1P07311 99 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 COX6B1P14854 86 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 FAUP35544 74 aaKnown RBP0.25□□□□□ -2.37
CDKN3-201ENST00000216414 RBP2P50120 134 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 HSD52Q0P140 79 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 PLGLAQ15195 96 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 ETDBQ3ZM63 59 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 FAM167A-AS1Q96KT0 104 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 S100A13Q99584 98 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 TRGV9Q99603 122 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 WFDC6Q9BQY6 131 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 C2orf88Q9BSF0 95 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 TP53AIP1Q9HCN2 124 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 UBE2D4Q9Y2X8 147 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 U3KQA8 63 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 V9GYS6 101 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 NAV3Q8IVL0 2385 aa0.25□□□□□ -2.37
CDKN3-201ENST00000216414 PLXNA2O75051 1894 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 DOCK2Q92608 1830 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 TNRC6BQ9UPQ9 1833 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms