RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 OSTCQ9NRP0 149 aa18.35■□□□□ 0.53
PDCD2-201ENST00000167218 A0A1B0GUV1 79 aa18.34■□□□□ 0.53
PDCD2-201ENST00000167218 LINC01620Q4KN68 170 aa18.34■□□□□ 0.53
PDCD2-201ENST00000167218 TSKUQ8WUA8 353 aa18.34■□□□□ 0.53
PDCD2-201ENST00000167218 RPL39LQ96EH5 51 aaKnown RBP18.34■□□□□ 0.53
PDCD2-201ENST00000167218 C9JQL5 133 aa18.33■□□□□ 0.52
PDCD2-201ENST00000167218 SMIM15Q7Z3B0 74 aa18.33■□□□□ 0.52
PDCD2-201ENST00000167218 IGLV4-60A0A075B6I1 120 aa18.32■□□□□ 0.52
PDCD2-201ENST00000167218 COTL1Q14019 142 aa18.32■□□□□ 0.52
PDCD2-201ENST00000167218 TEX261Q6UWH6 196 aa18.32■□□□□ 0.52
PDCD2-201ENST00000167218 GFRA4Q9GZZ7 299 aa18.32■□□□□ 0.52
PDCD2-201ENST00000167218 HIGD1CA8MV81 97 aa18.31■□□□□ 0.52
PDCD2-201ENST00000167218 SRRM2Q9UQ35 2752 aaKnown RBP18.31■□□□□ 0.52
PDCD2-201ENST00000167218 FAM231BA6NCW3 169 aa18.3■□□□□ 0.52
PDCD2-201ENST00000167218 REG3AQ06141 175 aa18.3■□□□□ 0.52
PDCD2-201ENST00000167218 V9GYV3 84 aa18.3■□□□□ 0.52
PDCD2-201ENST00000167218 USP17L23D6RBM5 183 aa18.29■□□□□ 0.52
PDCD2-201ENST00000167218 HLA-DQA1P01909 254 aa18.29■□□□□ 0.52
PDCD2-201ENST00000167218 AMTP48728 403 aa18.29■□□□□ 0.52
PDCD2-201ENST00000167218 SRSF3P84103 164 aaKnown RBP18.29■□□□□ 0.52
PDCD2-201ENST00000167218 C14orf177Q52M58 125 aa18.29■□□□□ 0.52
PDCD2-201ENST00000167218 A0A1B0GUT8 65 aa18.28■□□□□ 0.52
PDCD2-201ENST00000167218 TMEM241Q24JQ0 296 aa18.28■□□□□ 0.52
PDCD2-201ENST00000167218 FAM74A3Q4VXF1 159 aa18.28■□□□□ 0.52
PDCD2-201ENST00000167218 ISOC2Q96AB3 205 aa18.28■□□□□ 0.52
PDCD2-201ENST00000167218 GAS8-AS1O95177 125 aa18.27■□□□□ 0.52
PDCD2-201ENST00000167218 RPL23P62829 140 aaKnown RBP18.27■□□□□ 0.52
PDCD2-201ENST00000167218 BORCS7Q96B45 105 aa18.26■□□□□ 0.51
PDCD2-201ENST00000167218 TMEM191AQ9H0A3 160 aa18.26■□□□□ 0.51
PDCD2-201ENST00000167218 TRBV6-5A0A0K0K1A5 114 aa18.25■□□□□ 0.51
PDCD2-201ENST00000167218 SDHAF1A6NFY7 115 aa18.25■□□□□ 0.51
PDCD2-201ENST00000167218 RNF185Q96GF1 192 aa18.25■□□□□ 0.51
PDCD2-201ENST00000167218 IGLV10-54A0A075B6I4 117 aa18.24■□□□□ 0.51
PDCD2-201ENST00000167218 UBE2L6O14933 153 aa18.24■□□□□ 0.51
PDCD2-201ENST00000167218 NCR2O95944 276 aa18.24■□□□□ 0.51
PDCD2-201ENST00000167218 PRSS1P07477 247 aa18.24■□□□□ 0.51
PDCD2-201ENST00000167218 TRAV8-4A0A0B4J246 113 aa18.23■□□□□ 0.51
PDCD2-201ENST00000167218 FAM229AH3BQW9 127 aa18.23■□□□□ 0.51
PDCD2-201ENST00000167218 INAFM2P0DMQ5 153 aa18.23■□□□□ 0.51
PDCD2-201ENST00000167218 NUP35Q8NFH5 326 aa18.23■□□□□ 0.51
PDCD2-201ENST00000167218 FLG2Q5D862 2391 aaPredicted RBP18.22■□□□□ 0.51
PDCD2-201ENST00000167218 PEA15Q15121 130 aa18.22■□□□□ 0.51
PDCD2-201ENST00000167218 NAT8Q9UHE5 227 aa18.22■□□□□ 0.51
PDCD2-201ENST00000167218 MYCBP2O75592 4640 aa18.21■□□□□ 0.51
PDCD2-201ENST00000167218 RAB4AP20338 218 aa18.21■□□□□ 0.51
PDCD2-201ENST00000167218 SMDT1Q9H4I9 107 aa18.21■□□□□ 0.51
PDCD2-201ENST00000167218 ADIRFQ15847 76 aa18.19■□□□□ 0.5
PDCD2-201ENST00000167218 SCXQ7RTU7 201 aa18.19■□□□□ 0.5
PDCD2-201ENST00000167218 AMN1Q8IY45 258 aa18.19■□□□□ 0.5
PDCD2-201ENST00000167218 I3L3M4 83 aa18.18■□□□□ 0.5
PDCD2-201ENST00000167218 APCSP02743 223 aa18.18■□□□□ 0.5
PDCD2-201ENST00000167218 RPS10P46783 165 aaKnown RBP18.18■□□□□ 0.5
PDCD2-201ENST00000167218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.17■□□□□ 0.5
PDCD2-201ENST00000167218 IGKV2-29A2NJV5 120 aaPredicted RBP18.17■□□□□ 0.5
PDCD2-201ENST00000167218 H7C423 109 aa18.17■□□□□ 0.5
PDCD2-201ENST00000167218 PMCHP20382 165 aa18.17■□□□□ 0.5
PDCD2-201ENST00000167218 RIGQ13278 110 aa18.17■□□□□ 0.5
PDCD2-201ENST00000167218 DGAT2L7PQ6IED9 249 aa18.17■□□□□ 0.5
PDCD2-201ENST00000167218 CHAC1Q9BUX1 264 aa18.17■□□□□ 0.5
PDCD2-201ENST00000167218 POLR2KP53803 58 aaKnown RBP18.16■□□□□ 0.5
PDCD2-201ENST00000167218 MRAP2Q96G30 205 aa18.16■□□□□ 0.5
PDCD2-201ENST00000167218 ST20Q9HBF5 79 aa18.16■□□□□ 0.5
PDCD2-201ENST00000167218 NAT8BQ9UHF3 227 aa18.16■□□□□ 0.5
PDCD2-201ENST00000167218 SMIM27A0A1W2PRY6 76 aa18.15■□□□□ 0.5
PDCD2-201ENST00000167218 CLRN3Q8NCR9 226 aa18.15■□□□□ 0.5
PDCD2-201ENST00000167218 TSHBP01222 138 aa18.14■□□□□ 0.49
PDCD2-201ENST00000167218 FGF6P10767 208 aa18.14■□□□□ 0.49
PDCD2-201ENST00000167218 ESDP10768 282 aa18.14■□□□□ 0.49
PDCD2-201ENST00000167218 C9orf163Q8N9P6 203 aa18.14■□□□□ 0.49
PDCD2-201ENST00000167218 AMMECR1LQ6DCA0 310 aa18.13■□□□□ 0.49
PDCD2-201ENST00000167218 TRBV27A0A0K0K1C4 114 aa18.12■□□□□ 0.49
PDCD2-201ENST00000167218 LINC00528Q8N1L1 170 aa18.12■□□□□ 0.49
PDCD2-201ENST00000167218 CIRBP-AS1Q8TBR5 109 aa18.12■□□□□ 0.49
PDCD2-201ENST00000167218 TMEM242Q9NWH2 141 aa18.12■□□□□ 0.49
PDCD2-201ENST00000167218 HERC1Q15751 4861 aa18.12■□□□□ 0.49
PDCD2-201ENST00000167218 SMKR1H3BMG3 65 aa18.11■□□□□ 0.49
PDCD2-201ENST00000167218 RNASEKQ6P5S7 137 aaKnown RBP18.11■□□□□ 0.49
PDCD2-201ENST00000167218 NRACQ8N912 160 aa18.1■□□□□ 0.49
PDCD2-201ENST00000167218 IGKV3OR2-268A0A0C4DH90 116 aa18.09■□□□□ 0.49
PDCD2-201ENST00000167218 GAGE12HA6NDE8 117 aa18.08■□□□□ 0.48
PDCD2-201ENST00000167218 ZNF25P17030 456 aaPredicted RBP18.08■□□□□ 0.48
PDCD2-201ENST00000167218 CNBPP62633 177 aaKnown RBP18.08■□□□□ 0.48
PDCD2-201ENST00000167218 FAM104BQ5XKR9 115 aa18.08■□□□□ 0.48
PDCD2-201ENST00000167218 DMBT1Q9UGM3 2413 aaPredicted RBP18.08■□□□□ 0.48
PDCD2-201ENST00000167218 SLPIP03973 132 aa18.07■□□□□ 0.48
PDCD2-201ENST00000167218 hDV102S1A0JD36 115 aa18.06■□□□□ 0.48
PDCD2-201ENST00000167218 MRPL51Q4U2R6 128 aaKnown RBP18.06■□□□□ 0.48
PDCD2-201ENST00000167218 SDIM1Q6ZPB5 146 aa18.06■□□□□ 0.48
PDCD2-201ENST00000167218 PLA2G1BP04054 148 aaKnown RBP18.05■□□□□ 0.48
PDCD2-201ENST00000167218 C15orf56Q8N910 161 aa18.05■□□□□ 0.48
PDCD2-201ENST00000167218 OR5A1Q8NGJ0 315 aa18.05■□□□□ 0.48
PDCD2-201ENST00000167218 CHCHD10Q8WYQ3 142 aaPredicted RBP18.05■□□□□ 0.48
PDCD2-201ENST00000167218 VCYO14598 125 aa18.04■□□□□ 0.48
PDCD2-201ENST00000167218 CAMPP49913 170 aa18.04■□□□□ 0.48
PDCD2-201ENST00000167218 MRPL52Q86TS9 123 aaKnown RBP18.04■□□□□ 0.48
PDCD2-201ENST00000167218 A0A1B0GW15 77 aa18.03■□□□□ 0.48
PDCD2-201ENST00000167218 PPP1R17O96001 155 aa18.03■□□□□ 0.48
PDCD2-201ENST00000167218 SUMO2P61956 95 aaKnown RBP18.03■□□□□ 0.48
PDCD2-201ENST00000167218 KRTAP10-4P60372 401 aaPredicted RBP18.02■□□□□ 0.48
PDCD2-201ENST00000167218 BTF3L4Q96K17 158 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms