RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 NKX2-5P52952 324 aaPredicted RBP10.16□□□□□ -0.78
ERCC1-201ENST00000013807 BCL2P10415 239 aa10.15□□□□□ -0.78
ERCC1-201ENST00000013807 TAGLN2P37802 199 aaKnown RBP10.15□□□□□ -0.78
ERCC1-201ENST00000013807 NUDT10Q8NFP7 164 aa10.15□□□□□ -0.78
ERCC1-201ENST00000013807 NUDT11Q96G61 164 aa10.15□□□□□ -0.78
ERCC1-201ENST00000013807 GFRA4Q9GZZ7 299 aa10.15□□□□□ -0.78
ERCC1-201ENST00000013807 MED9Q9NWA0 146 aa10.15□□□□□ -0.78
ERCC1-201ENST00000013807 IGLV10-54A0A075B6I4 117 aa10.14□□□□□ -0.79
ERCC1-201ENST00000013807 SLPIP03973 132 aa10.14□□□□□ -0.79
ERCC1-201ENST00000013807 HNRNPA3P51991 378 aaKnown RBP10.14□□□□□ -0.79
ERCC1-201ENST00000013807 hDV102S1A0JD36 115 aa10.13□□□□□ -0.79
ERCC1-201ENST00000013807 TCTE3Q8IZS6 198 aa10.13□□□□□ -0.79
ERCC1-201ENST00000013807 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
ERCC1-201ENST00000013807 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.12□□□□□ -0.79
ERCC1-201ENST00000013807 COTL1Q14019 142 aa10.12□□□□□ -0.79
ERCC1-201ENST00000013807 SLC51BQ86UW2 128 aa10.12□□□□□ -0.79
ERCC1-201ENST00000013807 GATD1Q8NB37 220 aa10.12□□□□□ -0.79
ERCC1-201ENST00000013807 IGHV3-64A0A075B6Q5 118 aa10.11□□□□□ -0.79
ERCC1-201ENST00000013807 AMTP48728 403 aa10.11□□□□□ -0.79
ERCC1-201ENST00000013807 H7C423 109 aa10.1□□□□□ -0.79
ERCC1-201ENST00000013807 K7EN84 100 aa10.1□□□□□ -0.79
ERCC1-201ENST00000013807 UBE2L6O14933 153 aa10.1□□□□□ -0.79
ERCC1-201ENST00000013807 NCR2O95944 276 aa10.1□□□□□ -0.79
ERCC1-201ENST00000013807 TWIST1Q15672 202 aa10.1□□□□□ -0.79
ERCC1-201ENST00000013807 Q6ZRU5 148 aa10.1□□□□□ -0.79
ERCC1-201ENST00000013807 OCC1Q8TAD7 63 aa10.1□□□□□ -0.79
ERCC1-201ENST00000013807 RPP21Q9H633 154 aaKnown RBP10.1□□□□□ -0.79
ERCC1-201ENST00000013807 AP5S1Q9NUS5 200 aa10.1□□□□□ -0.79
ERCC1-201ENST00000013807 HMCN2Q8NDA2 5059 aa10.1□□□□□ -0.79
ERCC1-201ENST00000013807 TEX261Q6UWH6 196 aa10.09□□□□□ -0.79
ERCC1-201ENST00000013807 SPACA4Q8TDM5 124 aa10.09□□□□□ -0.79
ERCC1-201ENST00000013807 FOXA3P55318 350 aaPredicted RBP10.08□□□□□ -0.8
ERCC1-201ENST00000013807 CFAP161Q6P656 301 aa10.08□□□□□ -0.8
ERCC1-201ENST00000013807 C15orf56Q8N910 161 aa10.08□□□□□ -0.8
ERCC1-201ENST00000013807 GTSF1Q8WW33 167 aa10.08□□□□□ -0.8
ERCC1-201ENST00000013807 RNASE7Q9H1E1 156 aaKnown RBP10.08□□□□□ -0.8
ERCC1-201ENST00000013807 A0A087WYN8 130 aa10.07□□□□□ -0.8
ERCC1-201ENST00000013807 TMEM250H0YL14 139 aa10.07□□□□□ -0.8
ERCC1-201ENST00000013807 MT1HL1P0DM35 61 aa10.07□□□□□ -0.8
ERCC1-201ENST00000013807 FAM231DQ6ZW35 169 aa10.07□□□□□ -0.8
ERCC1-201ENST00000013807 FAM210AQ96ND0 272 aa10.07□□□□□ -0.8
ERCC1-201ENST00000013807 PLAC8Q9NZF1 115 aa10.07□□□□□ -0.8
ERCC1-201ENST00000013807 TRAV26-2A0A0B4J265 109 aa10.06□□□□□ -0.8
ERCC1-201ENST00000013807 LYPD6BQ8NI32 183 aa10.06□□□□□ -0.8
ERCC1-201ENST00000013807 TRBV6-5A0A0K0K1A5 114 aa10.05□□□□□ -0.8
ERCC1-201ENST00000013807 GAGE12HA6NDE8 117 aa10.05□□□□□ -0.8
ERCC1-201ENST00000013807 RPS10P46783 165 aaKnown RBP10.05□□□□□ -0.8
ERCC1-201ENST00000013807 Q6ZNX1 250 aa10.05□□□□□ -0.8
ERCC1-201ENST00000013807 GVQW2A0A096LPI5 108 aaPredicted RBP10.04□□□□□ -0.8
ERCC1-201ENST00000013807 SDHAF1A6NFY7 115 aa10.04□□□□□ -0.8
ERCC1-201ENST00000013807 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
ERCC1-201ENST00000013807 ZNF25P17030 456 aaPredicted RBP10.04□□□□□ -0.8
ERCC1-201ENST00000013807 SMIM15Q7Z3B0 74 aa10.04□□□□□ -0.8
ERCC1-201ENST00000013807 RPL39LQ96EH5 51 aaKnown RBP10.04□□□□□ -0.8
ERCC1-201ENST00000013807 PLA2G2DQ9UNK4 145 aa10.04□□□□□ -0.8
ERCC1-201ENST00000013807 FAM231BA6NCW3 169 aa10.03□□□□□ -0.8
ERCC1-201ENST00000013807 A8MWL6 223 aa10.03□□□□□ -0.8
ERCC1-201ENST00000013807 NDUFS6O75380 124 aaKnown RBP10.03□□□□□ -0.8
ERCC1-201ENST00000013807 CT83Q5H943 113 aa10.03□□□□□ -0.8
ERCC1-201ENST00000013807 CHCHD10Q8WYQ3 142 aaPredicted RBP10.03□□□□□ -0.8
ERCC1-201ENST00000013807 I3L3M4 83 aa10.02□□□□□ -0.81
ERCC1-201ENST00000013807 FGF6P10767 208 aa10.02□□□□□ -0.81
ERCC1-201ENST00000013807 ESDP10768 282 aa10.02□□□□□ -0.81
ERCC1-201ENST00000013807 COX6A2Q02221 97 aa10.02□□□□□ -0.81
ERCC1-201ENST00000013807 AMMECR1LQ6DCA0 310 aa10.02□□□□□ -0.81
ERCC1-201ENST00000013807 OR5A1Q8NGJ0 315 aa10.02□□□□□ -0.81
ERCC1-201ENST00000013807 DPH3Q96FX2 82 aa10.02□□□□□ -0.81
ERCC1-201ENST00000013807 GATCO43716 136 aaKnown RBP10.01□□□□□ -0.81
ERCC1-201ENST00000013807 APCSP02743 223 aa10.01□□□□□ -0.81
ERCC1-201ENST00000013807 BLOC1S1P78537 153 aa10.01□□□□□ -0.81
ERCC1-201ENST00000013807 FOXI1Q12951 378 aa10.01□□□□□ -0.81
ERCC1-201ENST00000013807 UBR4Q5T4S7 5183 aa10.01□□□□□ -0.81
ERCC1-201ENST00000013807 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
ERCC1-201ENST00000013807 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
ERCC1-201ENST00000013807 PRSS3P2Q8NHM4 247 aa10□□□□□ -0.81
ERCC1-201ENST00000013807 POLR2KP53803 58 aaKnown RBP9.99□□□□□ -0.81
ERCC1-201ENST00000013807 RNASEKQ6P5S7 137 aaKnown RBP9.99□□□□□ -0.81
ERCC1-201ENST00000013807 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
ERCC1-201ENST00000013807 TMEM191AQ9H0A3 160 aa9.99□□□□□ -0.81
ERCC1-201ENST00000013807 IGKV3OR2-268A0A0C4DH90 116 aa9.98□□□□□ -0.81
ERCC1-201ENST00000013807 PHOX2AO14813 284 aa9.98□□□□□ -0.81
ERCC1-201ENST00000013807 TSHBP01222 138 aa9.98□□□□□ -0.81
ERCC1-201ENST00000013807 HIGD2BQ4VC39 106 aa9.98□□□□□ -0.81
ERCC1-201ENST00000013807 C7orf33Q8WU49 177 aa9.98□□□□□ -0.81
ERCC1-201ENST00000013807 TRBV27A0A0K0K1C4 114 aa9.97□□□□□ -0.81
ERCC1-201ENST00000013807 LINC00959A0A1B0GUT2 108 aa9.97□□□□□ -0.81
ERCC1-201ENST00000013807 GAS8-AS1O95177 125 aa9.97□□□□□ -0.81
ERCC1-201ENST00000013807 PMCHP20382 165 aa9.97□□□□□ -0.81
ERCC1-201ENST00000013807 TSKUQ8WUA8 353 aa9.97□□□□□ -0.81
ERCC1-201ENST00000013807 BTF3L4Q96K17 158 aa9.97□□□□□ -0.81
ERCC1-201ENST00000013807 CDC42SE2Q9NRR3 84 aa9.97□□□□□ -0.81
ERCC1-201ENST00000013807 A0A1B0GUT8 65 aa9.96□□□□□ -0.82
ERCC1-201ENST00000013807 ALKAL2Q6UX46 152 aa9.96□□□□□ -0.82
ERCC1-201ENST00000013807 LINC01551Q86U37 167 aa9.96□□□□□ -0.82
ERCC1-201ENST00000013807 TMEM101Q96IK0 257 aa9.96□□□□□ -0.82
ERCC1-201ENST00000013807 ST20Q9HBF5 79 aa9.96□□□□□ -0.82
ERCC1-201ENST00000013807 LINC00474Q9P2X8 69 aa9.96□□□□□ -0.82
ERCC1-201ENST00000013807 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.82
ERCC1-201ENST00000013807 IGHV1-58A0A0C4DH39 117 aa9.95□□□□□ -0.82
ERCC1-201ENST00000013807 RAB4AP20338 218 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms