RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 Q9H8V8 135 aa13.33□□□□□ -0.28
SCARB2-223ENST00000640640 TRAV12-1A0A0B4J245 112 aa13.32□□□□□ -0.28
SCARB2-223ENST00000640640 IGHV4-31P0DP07 118 aa13.32□□□□□ -0.28
SCARB2-223ENST00000640640 CRIP1P50238 77 aa13.32□□□□□ -0.28
SCARB2-223ENST00000640640 LRRC75A-AS1Q8N1F1 130 aa13.32□□□□□ -0.28
SCARB2-223ENST00000640640 DNAJC9-AS1A6NH13 148 aa13.32□□□□□ -0.28
SCARB2-223ENST00000640640 PSCAO43653 123 aa13.32□□□□□ -0.28
SCARB2-223ENST00000640640 TOMM6Q96B49 74 aa13.32□□□□□ -0.28
SCARB2-223ENST00000640640 Q6YL49 198 aa13.31□□□□□ -0.28
SCARB2-223ENST00000640640 PIFOQ8TCI5 191 aa13.31□□□□□ -0.28
SCARB2-223ENST00000640640 TIMM17AQ99595 171 aa13.31□□□□□ -0.28
SCARB2-223ENST00000640640 K7EQD1 137 aa13.31□□□□□ -0.28
SCARB2-223ENST00000640640 ZFAND6Q6FIF0 208 aa13.31□□□□□ -0.28
SCARB2-223ENST00000640640 BAALCQ8WXS3 180 aa13.31□□□□□ -0.28
SCARB2-223ENST00000640640 XCL1P47992 114 aa13.31□□□□□ -0.28
SCARB2-223ENST00000640640 SMAD5-AS1Q9Y6J3 95 aa13.31□□□□□ -0.28
SCARB2-223ENST00000640640 K7EQG2 157 aa13.3□□□□□ -0.28
SCARB2-223ENST00000640640 SPATA12Q7Z6I5 190 aa13.3□□□□□ -0.28
SCARB2-223ENST00000640640 WFDC11Q8NEX6 87 aa13.3□□□□□ -0.28
SCARB2-223ENST00000640640 PKD1L2Q7Z442 2459 aa13.3□□□□□ -0.28
SCARB2-223ENST00000640640 FASNP49327 2511 aaKnown RBP13.3□□□□□ -0.28
SCARB2-223ENST00000640640 CCL25O15444 150 aa13.3□□□□□ -0.28
SCARB2-223ENST00000640640 BOD1L2Q8IYS8 172 aa13.3□□□□□ -0.28
SCARB2-223ENST00000640640 TRBV7-3A0A075B6L6 115 aa13.29□□□□□ -0.28
SCARB2-223ENST00000640640 CLPSL1A2RUU4 121 aa13.29□□□□□ -0.28
SCARB2-223ENST00000640640 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
SCARB2-223ENST00000640640 DAZ4Q86SG3 579 aaKnown RBP13.29□□□□□ -0.28
SCARB2-223ENST00000640640 DAZ3Q9NR90 486 aaKnown RBP13.29□□□□□ -0.28
SCARB2-223ENST00000640640 PPDPFLQ8WWR9 84 aa13.29□□□□□ -0.28
SCARB2-223ENST00000640640 CFC1BP0CG36 223 aa13.29□□□□□ -0.28
SCARB2-223ENST00000640640 CFC1P0CG37 223 aa13.29□□□□□ -0.28
SCARB2-223ENST00000640640 C5orf38Q86SI9 138 aa13.29□□□□□ -0.28
SCARB2-223ENST00000640640 GYPEP15421 78 aa13.28□□□□□ -0.28
SCARB2-223ENST00000640640 MAP6D1Q9H9H5 199 aa13.28□□□□□ -0.28
SCARB2-223ENST00000640640 H3BMM0 161 aa13.28□□□□□ -0.28
SCARB2-223ENST00000640640 UBE2WQ96B02 151 aa13.28□□□□□ -0.28
SCARB2-223ENST00000640640 IGLV2-11P01706 119 aa13.28□□□□□ -0.28
SCARB2-223ENST00000640640 ATP6V0E2Q8NHE4 81 aa13.28□□□□□ -0.28
SCARB2-223ENST00000640640 ZNF462Q96JM2 2506 aa13.28□□□□□ -0.28
SCARB2-223ENST00000640640 FXYD2P54710 66 aa13.28□□□□□ -0.28
SCARB2-223ENST00000640640 C20orf173Q96LM9 149 aa13.28□□□□□ -0.28
SCARB2-223ENST00000640640 C11orf86A6NJI1 115 aa13.27□□□□□ -0.28
SCARB2-223ENST00000640640 SLC25A29Q8N8R3 303 aa13.27□□□□□ -0.28
SCARB2-223ENST00000640640 TP53TG3Q9ULZ0 132 aa13.27□□□□□ -0.28
SCARB2-223ENST00000640640 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.28
SCARB2-223ENST00000640640 GAGE2AQ6NT46 116 aa13.27□□□□□ -0.29
SCARB2-223ENST00000640640 Q6ZQT7 251 aa13.27□□□□□ -0.29
SCARB2-223ENST00000640640 C20orf203Q8NBC4 194 aa13.27□□□□□ -0.29
SCARB2-223ENST00000640640 HIGD1BQ9P298 99 aa13.27□□□□□ -0.29
SCARB2-223ENST00000640640 E9PLD3 99 aa13.26□□□□□ -0.29
SCARB2-223ENST00000640640 LGALS9O00182 355 aa13.26□□□□□ -0.29
SCARB2-223ENST00000640640 POLQO75417 2590 aa13.26□□□□□ -0.29
SCARB2-223ENST00000640640 TRAV13-2A0A0B4J235 113 aa13.26□□□□□ -0.29
SCARB2-223ENST00000640640 ZFAND2AQ8N6M9 145 aa13.26□□□□□ -0.29
SCARB2-223ENST00000640640 INAFM2P0DMQ5 153 aa13.25□□□□□ -0.29
SCARB2-223ENST00000640640 ZNF843Q8N446 348 aa13.25□□□□□ -0.29
SCARB2-223ENST00000640640 ODF3Q96PU9 254 aa13.25□□□□□ -0.29
SCARB2-223ENST00000640640 PRSS47A8MTI9 375 aa13.24□□□□□ -0.29
SCARB2-223ENST00000640640 IGLL5B9A064 214 aa13.24□□□□□ -0.29
SCARB2-223ENST00000640640 ATP5G1P05496 136 aa13.24□□□□□ -0.29
SCARB2-223ENST00000640640 A4D1N5 150 aa13.24□□□□□ -0.29
SCARB2-223ENST00000640640 CHD7Q9P2D1 2997 aa13.24□□□□□ -0.29
SCARB2-223ENST00000640640 SPART-AS1P0CW21 52 aa13.24□□□□□ -0.29
SCARB2-223ENST00000640640 HIST1H4AP62805 103 aaKnown RBP13.23□□□□□ -0.29
SCARB2-223ENST00000640640 ESM1Q9NQ30 184 aa13.23□□□□□ -0.29
SCARB2-223ENST00000640640 HERV-K104P63124 156 aa13.23□□□□□ -0.29
SCARB2-223ENST00000640640 TMEM263Q8WUH6 116 aaKnown RBP13.23□□□□□ -0.29
SCARB2-223ENST00000640640 IFITM1P13164 125 aa13.22□□□□□ -0.29
SCARB2-223ENST00000640640 MRPL23Q16540 153 aaKnown RBP13.22□□□□□ -0.29
SCARB2-223ENST00000640640 CARD19Q96LW7 228 aa13.22□□□□□ -0.29
SCARB2-223ENST00000640640 EPG5Q9HCE0 2579 aa13.22□□□□□ -0.29
SCARB2-223ENST00000640640 CRLF1O75462 422 aa13.22□□□□□ -0.29
SCARB2-223ENST00000640640 OPRPNQ99935 248 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-223ENST00000640640 DEFB114Q30KQ6 69 aa13.21□□□□□ -0.29
SCARB2-223ENST00000640640 MUSTN1Q8IVN3 82 aa13.21□□□□□ -0.29
SCARB2-223ENST00000640640 DEFB135Q30KP9 77 aa13.21□□□□□ -0.29
SCARB2-223ENST00000640640 PSMB8P28062 276 aa13.21□□□□□ -0.3
SCARB2-223ENST00000640640 HHLA3Q9XRX5 114 aa13.21□□□□□ -0.3
SCARB2-223ENST00000640640 TAX1BP3O14907 124 aa13.2□□□□□ -0.3
SCARB2-223ENST00000640640 A0A1W2PPR1 153 aa13.2□□□□□ -0.3
SCARB2-223ENST00000640640 Q6ZSV7 163 aa13.2□□□□□ -0.3
SCARB2-223ENST00000640640 Q6ZS46 218 aa13.19□□□□□ -0.3
SCARB2-223ENST00000640640 IGLV10-54A0A075B6I4 117 aa13.19□□□□□ -0.3
SCARB2-223ENST00000640640 SOCS3O14543 225 aa13.19□□□□□ -0.3
SCARB2-223ENST00000640640 TRBV10-1A0A0K0K1A3 114 aa13.19□□□□□ -0.3
SCARB2-223ENST00000640640 NTN5Q8WTR8 489 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-223ENST00000640640 P0DMU3 169 aa13.18□□□□□ -0.3
SCARB2-223ENST00000640640 FAM231AP0DMU4 169 aa13.18□□□□□ -0.3
SCARB2-223ENST00000640640 FAM231CP0DMU5 169 aa13.18□□□□□ -0.3
SCARB2-223ENST00000640640 NKAPP1Q8N9T2 125 aa13.18□□□□□ -0.3
SCARB2-223ENST00000640640 VSIG2Q96IQ7 327 aa13.18□□□□□ -0.3
SCARB2-223ENST00000640640 CEMP1Q6PRD7 247 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-223ENST00000640640 DEFB4AO15263 64 aa13.17□□□□□ -0.3
SCARB2-223ENST00000640640 INSL3P51460 131 aa13.17□□□□□ -0.3
SCARB2-223ENST00000640640 HIST2H2BCQ6DN03 193 aa13.17□□□□□ -0.3
SCARB2-223ENST00000640640 MRAPQ8TCY5 172 aa13.17□□□□□ -0.3
SCARB2-223ENST00000640640 Q6ZTI0 123 aa13.16□□□□□ -0.3
SCARB2-223ENST00000640640 RNF185Q96GF1 192 aa13.16□□□□□ -0.3
SCARB2-223ENST00000640640 ICOSQ9Y6W8 199 aa13.16□□□□□ -0.3
SCARB2-223ENST00000640640 IGKV2D-24A0A075B6R9 120 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms