RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GAGE12HA6NDE8 117 aa10.86□□□□□ -0.67
SCARB2-221ENST00000640341 IGIPA6NJ69 53 aa10.86□□□□□ -0.67
SCARB2-221ENST00000640341 CRIP2P52943 208 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-221ENST00000640341 FBN2P35556 2912 aa10.86□□□□□ -0.67
SCARB2-221ENST00000640341 POLR2KP53803 58 aaKnown RBP10.86□□□□□ -0.67
SCARB2-221ENST00000640341 TEX15Q9BXT5 2789 aa10.85□□□□□ -0.67
SCARB2-221ENST00000640341 CIDEAO60543 219 aa10.85□□□□□ -0.67
SCARB2-221ENST00000640341 CEMP1Q6PRD7 247 aaPredicted RBP10.85□□□□□ -0.67
SCARB2-221ENST00000640341 ATP6V0BQ99437 205 aa10.85□□□□□ -0.67
SCARB2-221ENST00000640341 JMJD1CQ15652 2540 aa10.85□□□□□ -0.67
SCARB2-221ENST00000640341 TRAV2A0A0B4J234 112 aa10.85□□□□□ -0.67
SCARB2-221ENST00000640341 B4DSR2 109 aa10.85□□□□□ -0.67
SCARB2-221ENST00000640341 PROK1P58294 105 aa10.85□□□□□ -0.67
SCARB2-221ENST00000640341 SIGMAR1Q99720 223 aa10.85□□□□□ -0.67
SCARB2-221ENST00000640341 ZNF580Q9UK33 172 aa10.85□□□□□ -0.67
SCARB2-221ENST00000640341 TSPAN13O95857 204 aa10.84□□□□□ -0.67
SCARB2-221ENST00000640341 IGHV3-16A0A0C4DH30 117 aa10.84□□□□□ -0.67
SCARB2-221ENST00000640341 H3BUA1 57 aa10.84□□□□□ -0.67
SCARB2-221ENST00000640341 SYT8Q8NBV8 401 aa10.84□□□□□ -0.67
SCARB2-221ENST00000640341 A0A0J9YY99 117 aa10.84□□□□□ -0.67
SCARB2-221ENST00000640341 J3QQQ9 107 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 MED14OSP0DP75 135 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 SPXQ9BT56 116 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 BEX4Q9NWD9 120 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-221ENST00000640341 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 A0A0J9YX75 114 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 A0A0J9YXV3 536 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 COX6B1P14854 86 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 DLX4Q92988 240 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-221ENST00000640341 IGHV4OR15-8A0A075B7B6 117 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 A0A087WW49 117 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 NDUFS8O00217 210 aa10.83□□□□□ -0.68
SCARB2-221ENST00000640341 PRRC2AP48634 2157 aaKnown RBP10.82□□□□□ -0.68
SCARB2-221ENST00000640341 PSMB8P28062 276 aa10.82□□□□□ -0.68
SCARB2-221ENST00000640341 NPC2P61916 151 aa10.82□□□□□ -0.68
SCARB2-221ENST00000640341 Q1RN00 199 aa10.82□□□□□ -0.68
SCARB2-221ENST00000640341 NF1P21359 2839 aa10.82□□□□□ -0.68
SCARB2-221ENST00000640341 PRSS2P07478 247 aa10.82□□□□□ -0.68
SCARB2-221ENST00000640341 M0QY20 66 aa10.81□□□□□ -0.68
SCARB2-221ENST00000640341 C18orf65Q6ZTR6 163 aa10.81□□□□□ -0.68
SCARB2-221ENST00000640341 APRG1Q8IVJ8 170 aa10.81□□□□□ -0.68
SCARB2-221ENST00000640341 VCX2Q9H322 139 aa10.81□□□□□ -0.68
SCARB2-221ENST00000640341 Q9UF83 564 aa10.81□□□□□ -0.68
SCARB2-221ENST00000640341 HOXD3P31249 432 aaPredicted RBP10.81□□□□□ -0.68
SCARB2-221ENST00000640341 DEFB131AP59861 70 aa10.81□□□□□ -0.68
SCARB2-221ENST00000640341 PAPPA-AS1Q5QFB9 102 aa10.8□□□□□ -0.68
SCARB2-221ENST00000640341 NDUFA11Q86Y39 141 aa10.8□□□□□ -0.68
SCARB2-221ENST00000640341 TMEM141Q96I45 108 aa10.8□□□□□ -0.68
SCARB2-221ENST00000640341 CFC1BP0CG36 223 aa10.8□□□□□ -0.68
SCARB2-221ENST00000640341 CFC1P0CG37 223 aa10.8□□□□□ -0.68
SCARB2-221ENST00000640341 PRORYQ9H606 182 aa10.8□□□□□ -0.68
SCARB2-221ENST00000640341 HECTD1Q9ULT8 2610 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 IGHV3-38A0A0C4DH36 116 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 TRBV27A0A0K0K1C4 114 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 NXPH4O95158 308 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 SLURP1P55000 103 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 TCTEX1D4Q5JR98 221 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 PRO0461Q9UI25 63 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 IGHV3OR16-12A0A075B7B8 117 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 K7EMT4 169 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 C11orf44Q8N8P7 122 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 TIMM17AQ99595 171 aa10.79□□□□□ -0.68
SCARB2-221ENST00000640341 A4D1N5 150 aa10.78□□□□□ -0.68
SCARB2-221ENST00000640341 TCL1BO95988 128 aa10.78□□□□□ -0.68
SCARB2-221ENST00000640341 CD28P10747 220 aa10.78□□□□□ -0.68
SCARB2-221ENST00000640341 CFHR3Q02985 330 aa10.78□□□□□ -0.68
SCARB2-221ENST00000640341 K7EQG2 157 aa10.78□□□□□ -0.68
SCARB2-221ENST00000640341 LGALS9O00182 355 aa10.78□□□□□ -0.68
SCARB2-221ENST00000640341 UBE2D1P51668 147 aa10.78□□□□□ -0.68
SCARB2-221ENST00000640341 TRPT1Q86TN4 253 aaKnown RBP10.78□□□□□ -0.68
SCARB2-221ENST00000640341 TRAV8-3A0A0A6YYJ7 113 aa10.78□□□□□ -0.68
SCARB2-221ENST00000640341 TRBV7-9A0A0J9YWB2 115 aa10.78□□□□□ -0.68
SCARB2-221ENST00000640341 SMCPP49901 116 aaPredicted RBP10.78□□□□□ -0.68
SCARB2-221ENST00000640341 A8MZ25 164 aa10.77□□□□□ -0.68
SCARB2-221ENST00000640341 NFE4Q86UQ8 179 aa10.77□□□□□ -0.68
SCARB2-221ENST00000640341 C9orf85Q96MD7 179 aa10.77□□□□□ -0.68
SCARB2-221ENST00000640341 NIPBLQ6KC79 2804 aaeCLIP10.77□□□□□ -0.69
SCARB2-221ENST00000640341 FLNBO75369 2602 aaKnown RBP10.77□□□□□ -0.69
SCARB2-221ENST00000640341 IGHV3-30P01768 117 aa10.77□□□□□ -0.69
SCARB2-221ENST00000640341 IGHV3-30-5P0DP03 117 aa10.77□□□□□ -0.69
SCARB2-221ENST00000640341 MTORP42345 2549 aa10.77□□□□□ -0.69
SCARB2-221ENST00000640341 I3L3M4 83 aa10.77□□□□□ -0.69
SCARB2-221ENST00000640341 RBMY1A1P0DJD3 496 aaKnown RBP10.77□□□□□ -0.69
SCARB2-221ENST00000640341 RBMY1CP0DJD4 496 aa10.77□□□□□ -0.69
SCARB2-221ENST00000640341 RBMY1FQ15415 496 aaKnown RBP10.77□□□□□ -0.69
SCARB2-221ENST00000640341 CFAP126Q5VTH2 177 aa10.76□□□□□ -0.69
SCARB2-221ENST00000640341 HELZ2Q9BYK8 2649 aaKnown RBP10.76□□□□□ -0.69
SCARB2-221ENST00000640341 FOXI1Q12951 378 aa10.76□□□□□ -0.69
SCARB2-221ENST00000640341 SLC25A29Q8N8R3 303 aa10.76□□□□□ -0.69
SCARB2-221ENST00000640341 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
SCARB2-221ENST00000640341 TNFRSF18Q9Y5U5 241 aa10.76□□□□□ -0.69
SCARB2-221ENST00000640341 MUSTN1Q8IVN3 82 aa10.75□□□□□ -0.69
SCARB2-221ENST00000640341 PRO1854Q9UHT4 67 aa10.75□□□□□ -0.69
SCARB2-221ENST00000640341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-221ENST00000640341 IGKV2-29A2NJV5 120 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-221ENST00000640341 ZNF22P17026 224 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-221ENST00000640341 C10orf126Q8N4M7 172 aa10.75□□□□□ -0.69
SCARB2-221ENST00000640341 A0A1B0GV72 72 aa10.74□□□□□ -0.69
SCARB2-221ENST00000640341 IGLV4-3A0A075B6K6 122 aa10.74□□□□□ -0.69
SCARB2-221ENST00000640341 LINC01619G3V211 115 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms