RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 LINC01545Q5VT33 79 aa9□□□□□ -0.97
PAX6-261ENST00000639943 LINC00315P59091 139 aa8.99□□□□□ -0.97
PAX6-261ENST00000639943 LAGE3Q14657 143 aa8.99□□□□□ -0.97
PAX6-261ENST00000639943 STHQ8IWL8 128 aa8.99□□□□□ -0.97
PAX6-261ENST00000639943 SMIM2Q9BVW6 85 aa8.99□□□□□ -0.97
PAX6-261ENST00000639943 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
PAX6-261ENST00000639943 LCE2DQ5TA82 110 aaPredicted RBP8.99□□□□□ -0.97
PAX6-261ENST00000639943 IFI27L1Q96BM0 104 aa8.99□□□□□ -0.97
PAX6-261ENST00000639943 JPT2Q9H910 190 aa8.98□□□□□ -0.97
PAX6-261ENST00000639943 INSP01308 110 aa8.98□□□□□ -0.97
PAX6-261ENST00000639943 IGLV1-51P01701 117 aa8.98□□□□□ -0.97
PAX6-261ENST00000639943 KRTAP10-3P60369 221 aa8.98□□□□□ -0.97
PAX6-261ENST00000639943 TMEM158Q8WZ71 300 aa8.98□□□□□ -0.97
PAX6-261ENST00000639943 RPL39LQ96EH5 51 aaKnown RBP8.98□□□□□ -0.97
PAX6-261ENST00000639943 LINC00467Q9BRT7 94 aa8.98□□□□□ -0.97
PAX6-261ENST00000639943 K7EMI3 77 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 VAMP3Q15836 100 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 STPG4Q8N801 248 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 A0A087WWL8 130 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 CRLF1O75462 422 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 GAGE5Q13069 117 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 GAGE6Q13070 117 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 LGALS9BQ3B8N2 356 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 ZNF876PQ49A33 203 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 LGALS9CQ6DKI2 356 aa8.97□□□□□ -0.97
PAX6-261ENST00000639943 IGLC3P0DOY3 106 aa8.96□□□□□ -0.97
PAX6-261ENST00000639943 HTN1P15515 57 aa8.96□□□□□ -0.97
PAX6-261ENST00000639943 SMAGPQ0VAQ4 97 aa8.96□□□□□ -0.97
PAX6-261ENST00000639943 SUMO4Q6EEV6 95 aa8.96□□□□□ -0.97
PAX6-261ENST00000639943 TRPT1Q86TN4 253 aaKnown RBP8.96□□□□□ -0.97
PAX6-261ENST00000639943 LINC01587Q99440 93 aa8.96□□□□□ -0.97
PAX6-261ENST00000639943 NSD1Q96L73 2696 aaPredicted RBP8.96□□□□□ -0.97
PAX6-261ENST00000639943 F5H697 171 aa8.96□□□□□ -0.98
PAX6-261ENST00000639943 IGLL1P15814 213 aa8.96□□□□□ -0.98
PAX6-261ENST00000639943 ZNF415Q09FC8 603 aa8.96□□□□□ -0.98
PAX6-261ENST00000639943 ORMDL2Q53FV1 153 aa8.96□□□□□ -0.98
PAX6-261ENST00000639943 MCRIP2Q9BUT9 160 aaKnown RBP8.96□□□□□ -0.98
PAX6-261ENST00000639943 UQCR10Q9UDW1 63 aa8.96□□□□□ -0.98
PAX6-261ENST00000639943 GAGE12BA1L429 117 aa8.95□□□□□ -0.98
PAX6-261ENST00000639943 CRYGDP07320 174 aa8.95□□□□□ -0.98
PAX6-261ENST00000639943 ST20Q9HBF5 79 aa8.95□□□□□ -0.98
PAX6-261ENST00000639943 ATP5LO75964 103 aa8.95□□□□□ -0.98
PAX6-261ENST00000639943 NUDT3O95989 172 aa8.95□□□□□ -0.98
PAX6-261ENST00000639943 BEAN1Q3B7T3 259 aa8.95□□□□□ -0.98
PAX6-261ENST00000639943 PIK3CD-AS1Q5SR53 167 aa8.95□□□□□ -0.98
PAX6-261ENST00000639943 FAM74A4Q5TZK3 123 aa8.95□□□□□ -0.98
PAX6-261ENST00000639943 C18orf15Q96N68 181 aa8.95□□□□□ -0.98
PAX6-261ENST00000639943 FN1P02751 2386 aaKnown RBP8.94□□□□□ -0.98
PAX6-261ENST00000639943 MDFIQ99750 246 aa8.94□□□□□ -0.98
PAX6-261ENST00000639943 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
PAX6-261ENST00000639943 HIVEP1P15822 2718 aa8.94□□□□□ -0.98
PAX6-261ENST00000639943 M0R2P5 195 aa8.94□□□□□ -0.98
PAX6-261ENST00000639943 ZNF56Q15929 161 aa8.94□□□□□ -0.98
PAX6-261ENST00000639943 XCL2Q9UBD3 114 aa8.94□□□□□ -0.98
PAX6-261ENST00000639943 C2CD3Q4AC94 2353 aa8.94□□□□□ -0.98
PAX6-261ENST00000639943 hDV102S1A0JD36 115 aa8.93□□□□□ -0.98
PAX6-261ENST00000639943 LINC00482Q8N8I6 264 aa8.93□□□□□ -0.98
PAX6-261ENST00000639943 TRBV6-5A0A0K0K1A5 114 aa8.92□□□□□ -0.98
PAX6-261ENST00000639943 POLR2KP53803 58 aaKnown RBP8.92□□□□□ -0.98
PAX6-261ENST00000639943 CSDC2Q9Y534 153 aaKnown RBP8.92□□□□□ -0.98
PAX6-261ENST00000639943 A8MWV9 139 aa8.92□□□□□ -0.98
PAX6-261ENST00000639943 M0QY20 66 aa8.92□□□□□ -0.98
PAX6-261ENST00000639943 VCYO14598 125 aa8.92□□□□□ -0.98
PAX6-261ENST00000639943 PRSS1P07477 247 aa8.92□□□□□ -0.98
PAX6-261ENST00000639943 ERASQ7Z444 233 aa8.92□□□□□ -0.98
PAX6-261ENST00000639943 GTSF1LQ9H1H1 148 aa8.92□□□□□ -0.98
PAX6-261ENST00000639943 Q6ZN92 141 aa8.91□□□□□ -0.98
PAX6-261ENST00000639943 C11orf72Q8NBR9 251 aa8.91□□□□□ -0.98
PAX6-261ENST00000639943 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
PAX6-261ENST00000639943 C19orf73Q9NVV2 129 aa8.91□□□□□ -0.98
PAX6-261ENST00000639943 PRM2P04554 102 aa8.91□□□□□ -0.98
PAX6-261ENST00000639943 MALP21145 153 aa8.91□□□□□ -0.98
PAX6-261ENST00000639943 C1orf158Q8N1D5 194 aa8.91□□□□□ -0.98
PAX6-261ENST00000639943 HNRNPA3P51991 378 aaKnown RBP8.9□□□□□ -0.98
PAX6-261ENST00000639943 KIR2DL4Q99706 377 aa8.9□□□□□ -0.98
PAX6-261ENST00000639943 SDHAF1A6NFY7 115 aa8.9□□□□□ -0.99
PAX6-261ENST00000639943 LINC01549A6NIU2 74 aa8.9□□□□□ -0.99
PAX6-261ENST00000639943 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.9□□□□□ -0.99
PAX6-261ENST00000639943 H7C1H1 209 aa8.9□□□□□ -0.99
PAX6-261ENST00000639943 EDA2RQ9HAV5 297 aa8.9□□□□□ -0.99
PAX6-261ENST00000639943 TRBV27A0A0K0K1C4 114 aa8.89□□□□□ -0.99
PAX6-261ENST00000639943 SCGB3A1Q96QR1 104 aa8.89□□□□□ -0.99
PAX6-261ENST00000639943 MRPL16Q9NX20 251 aaKnown RBP8.89□□□□□ -0.99
PAX6-261ENST00000639943 DKK2Q9UBU2 259 aa8.89□□□□□ -0.99
PAX6-261ENST00000639943 INSL3P51460 131 aa8.89□□□□□ -0.99
PAX6-261ENST00000639943 MORN3Q6PF18 240 aaPredicted RBP8.89□□□□□ -0.99
PAX6-261ENST00000639943 C2orf66Q6UXQ4 117 aa8.89□□□□□ -0.99
PAX6-261ENST00000639943 SPANXA1Q9NS26 97 aa8.89□□□□□ -0.99
PAX6-261ENST00000639943 IGHV3OR16-12A0A075B7B8 117 aa8.88□□□□□ -0.99
PAX6-261ENST00000639943 PRSS29PA6NIE9 313 aa8.88□□□□□ -0.99
PAX6-261ENST00000639943 SEC61GP60059 68 aa8.88□□□□□ -0.99
PAX6-261ENST00000639943 NEGR1Q7Z3B1 354 aa8.88□□□□□ -0.99
PAX6-261ENST00000639943 MRAPQ8TCY5 172 aa8.88□□□□□ -0.99
PAX6-261ENST00000639943 UFSP1Q6NVU6 142 aa8.88□□□□□ -0.99
PAX6-261ENST00000639943 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.88□□□□□ -0.99
PAX6-261ENST00000639943 C1QTNF4Q9BXJ3 329 aa8.88□□□□□ -0.99
PAX6-261ENST00000639943 WFDC10AQ9H1F0 79 aa8.88□□□□□ -0.99
PAX6-261ENST00000639943 ERG28Q9UKR5 140 aa8.88□□□□□ -0.99
PAX6-261ENST00000639943 MRPS16Q9Y3D3 137 aaKnown RBP8.88□□□□□ -0.99
PAX6-261ENST00000639943 NACAE9PAV3 2078 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms