RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 P0C879 139 aa13.2□□□□□ -0.3
HNRNPU-217ENST00000638952 LOXL1Q08397 574 aaPredicted RBP13.2□□□□□ -0.3
HNRNPU-217ENST00000638952 HIST2H2BDQ6DRA6 164 aa13.2□□□□□ -0.3
HNRNPU-217ENST00000638952 C5orf56Q8N8D9 126 aa13.2□□□□□ -0.3
HNRNPU-217ENST00000638952 C16orf74Q96GX8 76 aa13.2□□□□□ -0.3
HNRNPU-217ENST00000638952 OBSL1O75147 1896 aa13.2□□□□□ -0.3
HNRNPU-217ENST00000638952 MIAQ16674 131 aa13.19□□□□□ -0.3
HNRNPU-217ENST00000638952 C19orf71A6NCJ1 209 aa13.19□□□□□ -0.3
HNRNPU-217ENST00000638952 CTRLP40313 264 aa13.19□□□□□ -0.3
HNRNPU-217ENST00000638952 USP17L23D6RBM5 183 aa13.19□□□□□ -0.3
HNRNPU-217ENST00000638952 K7ERS5 55 aa13.19□□□□□ -0.3
HNRNPU-217ENST00000638952 CRIP3Q6Q6R5 217 aa13.19□□□□□ -0.3
HNRNPU-217ENST00000638952 Q8N7P7 452 aa13.19□□□□□ -0.3
HNRNPU-217ENST00000638952 WISP2O76076 250 aa13.18□□□□□ -0.3
HNRNPU-217ENST00000638952 NDUFA7O95182 113 aa13.18□□□□□ -0.3
HNRNPU-217ENST00000638952 COX7BP24311 80 aa13.18□□□□□ -0.3
HNRNPU-217ENST00000638952 CASC2Q6XLA1 102 aa13.18□□□□□ -0.3
HNRNPU-217ENST00000638952 ZNF295-AS1Q8N0V1 137 aa13.18□□□□□ -0.3
HNRNPU-217ENST00000638952 CHD3Q12873 2000 aaKnown RBP13.18□□□□□ -0.3
HNRNPU-217ENST00000638952 C2orf70A6NJV1 201 aa13.18□□□□□ -0.3
HNRNPU-217ENST00000638952 IGLV1-47P01700 117 aa13.17□□□□□ -0.3
HNRNPU-217ENST00000638952 DEFB1P60022 68 aa13.17□□□□□ -0.3
HNRNPU-217ENST00000638952 IGKV1D-37A0A075B6S9 117 aa13.17□□□□□ -0.3
HNRNPU-217ENST00000638952 SCXQ7RTU7 201 aa13.17□□□□□ -0.3
HNRNPU-217ENST00000638952 TRBV6-1A0A0K0K1D8 114 aa13.17□□□□□ -0.3
HNRNPU-217ENST00000638952 TRBV7-3A0A075B6L6 115 aa13.17□□□□□ -0.3
HNRNPU-217ENST00000638952 IGHV4-30-2A0A087WSY4 118 aa13.16□□□□□ -0.3
HNRNPU-217ENST00000638952 BRWD1-AS2P59051 145 aa13.16□□□□□ -0.3
HNRNPU-217ENST00000638952 DENND4AQ7Z401 1863 aa13.16□□□□□ -0.3
HNRNPU-217ENST00000638952 ZFP36P26651 326 aaKnown RBP13.16□□□□□ -0.3
HNRNPU-217ENST00000638952 CCL24O00175 119 aa13.16□□□□□ -0.3
HNRNPU-217ENST00000638952 IGLV2-8P01709 118 aa13.16□□□□□ -0.3
HNRNPU-217ENST00000638952 RBX1P62877 108 aa13.15□□□□□ -0.3
HNRNPU-217ENST00000638952 ATP5EP2Q5VTU8 51 aa13.15□□□□□ -0.3
HNRNPU-217ENST00000638952 SPAG11BQ08648 103 aa13.15□□□□□ -0.3
HNRNPU-217ENST00000638952 USF3Q68DE3 2245 aa13.15□□□□□ -0.3
HNRNPU-217ENST00000638952 SPRY4Q9C004 299 aa13.14□□□□□ -0.31
HNRNPU-217ENST00000638952 LINC00322Q6ZN03 302 aaPredicted RBP13.14□□□□□ -0.31
HNRNPU-217ENST00000638952 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
HNRNPU-217ENST00000638952 A0A0J9YXY3 114 aa13.13□□□□□ -0.31
HNRNPU-217ENST00000638952 ESM1Q9NQ30 184 aa13.13□□□□□ -0.31
HNRNPU-217ENST00000638952 A0A1B0GXF2 115 aa13.13□□□□□ -0.31
HNRNPU-217ENST00000638952 A6NED7 52 aa13.13□□□□□ -0.31
HNRNPU-217ENST00000638952 ATP5EP56381 51 aaPredicted RBP13.13□□□□□ -0.31
HNRNPU-217ENST00000638952 FANCD2OSQ96PS1 177 aa13.13□□□□□ -0.31
HNRNPU-217ENST00000638952 TIMM17BO60830 172 aa13.13□□□□□ -0.31
HNRNPU-217ENST00000638952 ADORA2A-AS1P86434 159 aa13.13□□□□□ -0.31
HNRNPU-217ENST00000638952 TM2D2Q9BX73 214 aa13.13□□□□□ -0.31
HNRNPU-217ENST00000638952 PRR15LQ9BU68 103 aa13.12□□□□□ -0.31
HNRNPU-217ENST00000638952 C2orf16Q68DN1 1984 aa13.12□□□□□ -0.31
HNRNPU-217ENST00000638952 IGF2-ASQ6U949 168 aa13.12□□□□□ -0.31
HNRNPU-217ENST00000638952 C1orf229Q6ZS94 237 aaPredicted RBP13.12□□□□□ -0.31
HNRNPU-217ENST00000638952 SPTBN2O15020 2390 aa13.12□□□□□ -0.31
HNRNPU-217ENST00000638952 CCDC179H3BU77 68 aa13.11□□□□□ -0.31
HNRNPU-217ENST00000638952 TNRC6AQ8NDV7 1962 aaKnown RBP13.11□□□□□ -0.31
HNRNPU-217ENST00000638952 MED14OSP0DP75 135 aa13.11□□□□□ -0.31
HNRNPU-217ENST00000638952 C20orf203Q8NBC4 194 aa13.11□□□□□ -0.31
HNRNPU-217ENST00000638952 COL6A6A6NMZ7 2263 aa13.11□□□□□ -0.31
HNRNPU-217ENST00000638952 C4orf48Q5BLP8 95 aa13.11□□□□□ -0.31
HNRNPU-217ENST00000638952 SNURFQ9Y675 71 aa13.11□□□□□ -0.31
HNRNPU-217ENST00000638952 PIK3CD-AS1Q5SR53 167 aa13.1□□□□□ -0.31
HNRNPU-217ENST00000638952 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
HNRNPU-217ENST00000638952 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
HNRNPU-217ENST00000638952 TP73-AS1Q9UF72 201 aa13.1□□□□□ -0.31
HNRNPU-217ENST00000638952 ZNF80P51504 273 aaPredicted RBP13.1□□□□□ -0.31
HNRNPU-217ENST00000638952 SERP2Q8N6R1 65 aa13.1□□□□□ -0.31
HNRNPU-217ENST00000638952 TMEM131Q92545 1883 aa13.09□□□□□ -0.31
HNRNPU-217ENST00000638952 CEMP1Q6PRD7 247 aaPredicted RBP13.09□□□□□ -0.31
HNRNPU-217ENST00000638952 HHLA3Q9XRX5 114 aa13.09□□□□□ -0.31
HNRNPU-217ENST00000638952 SPART-AS1P0CW21 52 aa13.09□□□□□ -0.31
HNRNPU-217ENST00000638952 UNQ9165/PRO28630Q6UXU0 137 aa13.09□□□□□ -0.31
HNRNPU-217ENST00000638952 C20orf173Q96LM9 149 aa13.09□□□□□ -0.31
HNRNPU-217ENST00000638952 SLPIP03973 132 aa13.08□□□□□ -0.31
HNRNPU-217ENST00000638952 SHANK1Q9Y566 2161 aa13.08□□□□□ -0.31
HNRNPU-217ENST00000638952 NDUFC1O43677 76 aa13.08□□□□□ -0.32
HNRNPU-217ENST00000638952 CCL18P55774 89 aa13.08□□□□□ -0.32
HNRNPU-217ENST00000638952 EIF4EBP1Q13541 118 aaPredicted RBP13.08□□□□□ -0.32
HNRNPU-217ENST00000638952 MDFICQ9P1T7 246 aa13.07□□□□□ -0.32
HNRNPU-217ENST00000638952 SIRPDQ9H106 197 aa13.07□□□□□ -0.32
HNRNPU-217ENST00000638952 ACACAQ13085 2346 aa13.07□□□□□ -0.32
HNRNPU-217ENST00000638952 YPEL4Q96NS1 127 aa13.07□□□□□ -0.32
HNRNPU-217ENST00000638952 M0QXV9 152 aa13.06□□□□□ -0.32
HNRNPU-217ENST00000638952 MRPS12O15235 138 aaKnown RBP13.06□□□□□ -0.32
HNRNPU-217ENST00000638952 NRGNQ92686 78 aa13.06□□□□□ -0.32
HNRNPU-217ENST00000638952 K7EMT4 169 aa13.06□□□□□ -0.32
HNRNPU-217ENST00000638952 WFDC10BQ8IUB3 73 aa13.06□□□□□ -0.32
HNRNPU-217ENST00000638952 LRRC75A-AS1Q8N1F1 130 aa13.06□□□□□ -0.32
HNRNPU-217ENST00000638952 TNRC6BQ9UPQ9 1833 aaKnown RBP13.05□□□□□ -0.32
HNRNPU-217ENST00000638952 TMEM263Q8WUH6 116 aaKnown RBP13.05□□□□□ -0.32
HNRNPU-217ENST00000638952 CLUHP3Q96NS8 147 aa13.05□□□□□ -0.32
HNRNPU-217ENST00000638952 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
HNRNPU-217ENST00000638952 TRIAP1O43715 76 aa13.04□□□□□ -0.32
HNRNPU-217ENST00000638952 LTBP2Q14767 1821 aa13.04□□□□□ -0.32
HNRNPU-217ENST00000638952 MALRD1Q5VYJ5 2156 aa13.04□□□□□ -0.32
HNRNPU-217ENST00000638952 B9D2Q9BPU9 175 aa13.04□□□□□ -0.32
HNRNPU-217ENST00000638952 CCDC140Q96MF4 163 aa13.04□□□□□ -0.32
HNRNPU-217ENST00000638952 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
HNRNPU-217ENST00000638952 LINC00694P0DN24 101 aa13.03□□□□□ -0.32
HNRNPU-217ENST00000638952 NACAE9PAV3 2078 aa13.03□□□□□ -0.32
HNRNPU-217ENST00000638952 MED13Q9UHV7 2174 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms