RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 SCGB3A1Q96QR1 104 aa12.03□□□□□ -0.48
HCG27-205ENST00000638546 WNK1Q9H4A3 2382 aa12.02□□□□□ -0.48
HCG27-205ENST00000638546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.02□□□□□ -0.49
HCG27-205ENST00000638546 M0R143 59 aa12.02□□□□□ -0.49
HCG27-205ENST00000638546 HNRNPA3P51991 378 aaKnown RBP12.02□□□□□ -0.49
HCG27-205ENST00000638546 ODF1Q14990 250 aa12.02□□□□□ -0.49
HCG27-205ENST00000638546 CFAP126Q5VTH2 177 aa12.02□□□□□ -0.49
HCG27-205ENST00000638546 C1QTNF4Q9BXJ3 329 aa12.02□□□□□ -0.49
HCG27-205ENST00000638546 DKK2Q9UBU2 259 aa12.02□□□□□ -0.49
HCG27-205ENST00000638546 LINC01549A6NIU2 74 aa12.01□□□□□ -0.49
HCG27-205ENST00000638546 RHODO00212 210 aa12.01□□□□□ -0.49
HCG27-205ENST00000638546 RS1O15537 224 aa12.01□□□□□ -0.49
HCG27-205ENST00000638546 C2orf66Q6UXQ4 117 aa12.01□□□□□ -0.49
HCG27-205ENST00000638546 ZFP2Q6ZN57 461 aa12.01□□□□□ -0.49
HCG27-205ENST00000638546 IL17DQ8TAD2 202 aa12.01□□□□□ -0.49
HCG27-205ENST00000638546 MRPL16Q9NX20 251 aaKnown RBP12.01□□□□□ -0.49
HCG27-205ENST00000638546 IGHV3-73A0A0B4J1V6 119 aa12□□□□□ -0.49
HCG27-205ENST00000638546 LBHQ53QV2 105 aaPredicted RBP12□□□□□ -0.49
HCG27-205ENST00000638546 ZMAT4Q9H898 229 aa12□□□□□ -0.49
HCG27-205ENST00000638546 SNHG12Q9BXW3 62 aa12□□□□□ -0.49
HCG27-205ENST00000638546 CYSLTR1Q9Y271 337 aa12□□□□□ -0.49
HCG27-205ENST00000638546 JMJD1CQ15652 2540 aa12□□□□□ -0.49
HCG27-205ENST00000638546 A0A087WX48 190 aa11.99□□□□□ -0.49
HCG27-205ENST00000638546 TRAV12-1A0A0B4J245 112 aa11.99□□□□□ -0.49
HCG27-205ENST00000638546 SLC25A34Q6PIV7 304 aa11.99□□□□□ -0.49
HCG27-205ENST00000638546 RNASE8Q8TDE3 154 aaKnown RBP11.99□□□□□ -0.49
HCG27-205ENST00000638546 TMEM263Q8WUH6 116 aaKnown RBP11.99□□□□□ -0.49
HCG27-205ENST00000638546 EREGO14944 169 aa11.98□□□□□ -0.49
HCG27-205ENST00000638546 DPM2O94777 84 aa11.98□□□□□ -0.49
HCG27-205ENST00000638546 RHOHQ15669 191 aa11.98□□□□□ -0.49
HCG27-205ENST00000638546 ERASQ7Z444 233 aa11.98□□□□□ -0.49
HCG27-205ENST00000638546 GTSCR1Q86UQ5 136 aa11.98□□□□□ -0.49
HCG27-205ENST00000638546 C2orf88Q9BSF0 95 aa11.98□□□□□ -0.49
HCG27-205ENST00000638546 MRPS16Q9Y3D3 137 aaKnown RBP11.98□□□□□ -0.49
HCG27-205ENST00000638546 I3L3M4 83 aa11.97□□□□□ -0.49
HCG27-205ENST00000638546 IGKCP01834 107 aa11.97□□□□□ -0.49
HCG27-205ENST00000638546 CSNK1G2-AS1Q8NCQ2 148 aa11.97□□□□□ -0.49
HCG27-205ENST00000638546 ANKRD39Q53RE8 183 aa11.97□□□□□ -0.49
HCG27-205ENST00000638546 Q6ZSN1 163 aa11.97□□□□□ -0.49
HCG27-205ENST00000638546 STPG4Q8N801 248 aa11.97□□□□□ -0.49
HCG27-205ENST00000638546 SPATA3Q8NHX4 192 aa11.97□□□□□ -0.49
HCG27-205ENST00000638546 TP53TG1Q9Y2A0 90 aa11.97□□□□□ -0.49
HCG27-205ENST00000638546 TNFRSF18Q9Y5U5 241 aa11.97□□□□□ -0.49
HCG27-205ENST00000638546 TRGV1A0A0A0MS02 117 aa11.96□□□□□ -0.5
HCG27-205ENST00000638546 TSHBP01222 138 aa11.96□□□□□ -0.5
HCG27-205ENST00000638546 IGHV3-53P01767 116 aa11.96□□□□□ -0.5
HCG27-205ENST00000638546 COX8AP10176 69 aa11.96□□□□□ -0.5
HCG27-205ENST00000638546 C16orf74Q96GX8 76 aa11.96□□□□□ -0.5
HCG27-205ENST00000638546 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.5
HCG27-205ENST00000638546 DAZ2Q13117 558 aaKnown RBP11.95□□□□□ -0.5
HCG27-205ENST00000638546 NEXN-AS1Q8NBZ9 246 aa11.95□□□□□ -0.5
HCG27-205ENST00000638546 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
HCG27-205ENST00000638546 TMEM141Q96I45 108 aa11.95□□□□□ -0.5
HCG27-205ENST00000638546 DNAJC30Q96LL9 226 aa11.95□□□□□ -0.5
HCG27-205ENST00000638546 IGIPA6NJ69 53 aa11.94□□□□□ -0.5
HCG27-205ENST00000638546 P0DMU3 169 aa11.94□□□□□ -0.5
HCG27-205ENST00000638546 FAM231AP0DMU4 169 aa11.94□□□□□ -0.5
HCG27-205ENST00000638546 FAM231CP0DMU5 169 aa11.94□□□□□ -0.5
HCG27-205ENST00000638546 OR4C5Q8NGB2 326 aa11.94□□□□□ -0.5
HCG27-205ENST00000638546 BAALCQ8WXS3 180 aa11.94□□□□□ -0.5
HCG27-205ENST00000638546 HHLA3Q9XRX5 114 aa11.94□□□□□ -0.5
HCG27-205ENST00000638546 CHTOPQ9Y3Y2 248 aaKnown RBP11.94□□□□□ -0.5
HCG27-205ENST00000638546 RRN3P1Q2M238 152 aa11.93□□□□□ -0.5
HCG27-205ENST00000638546 F8VRH5 84 aa11.93□□□□□ -0.5
HCG27-205ENST00000638546 PLNP26678 52 aa11.93□□□□□ -0.5
HCG27-205ENST00000638546 WFDC9Q8NEX5 89 aa11.93□□□□□ -0.5
HCG27-205ENST00000638546 TIMM17AQ99595 171 aa11.93□□□□□ -0.5
HCG27-205ENST00000638546 NOP10Q9NPE3 64 aaKnown RBP11.93□□□□□ -0.5
HCG27-205ENST00000638546 RPL39P62891 51 aaKnown RBP11.92□□□□□ -0.5
HCG27-205ENST00000638546 Q6ZTI0 123 aa11.92□□□□□ -0.5
HCG27-205ENST00000638546 TRAV4A0A0B4J268 109 aa11.91□□□□□ -0.5
HCG27-205ENST00000638546 PRSS29PA6NIE9 313 aa11.91□□□□□ -0.5
HCG27-205ENST00000638546 C20orf203Q8NBC4 194 aa11.91□□□□□ -0.5
HCG27-205ENST00000638546 OVOL2Q9BRP0 275 aa11.91□□□□□ -0.5
HCG27-205ENST00000638546 PLAC8L1A1L4L8 177 aa11.9□□□□□ -0.5
HCG27-205ENST00000638546 PRIMA1Q86XR5 153 aa11.9□□□□□ -0.5
HCG27-205ENST00000638546 DLEU1O43261 78 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 FGF6P10767 208 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 BATFQ16520 125 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 ZC2HC1BQ5TFG8 222 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 BOD1L2Q8IYS8 172 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 ZNF479Q96JC4 524 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 TP73-AS1Q9UF72 201 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 NMUP48645 174 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 TCTAP57738 103 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 PMVKQ15126 192 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 Q9UF83 564 aa11.89□□□□□ -0.51
HCG27-205ENST00000638546 CIDEAO60543 219 aa11.88□□□□□ -0.51
HCG27-205ENST00000638546 CST9LQ9H4G1 147 aa11.87□□□□□ -0.51
HCG27-205ENST00000638546 ATRQ13535 2644 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 A0A1B0GV90 55 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 GAGE12BA1L429 117 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 GAGE7O76087 117 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 GAGE12FP0CL80 117 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 GAGE12GP0CL81 117 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 GAGE12IP0CL82 117 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 HINT1P49773 126 aaPredicted RBP11.86□□□□□ -0.51
HCG27-205ENST00000638546 TRBV10-1A0A0K0K1A3 114 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 WIPF1O43516 503 aa11.86□□□□□ -0.51
HCG27-205ENST00000638546 KRTAP24-1Q3LI83 254 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms