RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ODF3L2Q3SX64 289 aa15.73■□□□□ 0.11
CLN6-224ENST00000638076 HIGD1BQ9P298 99 aa15.73■□□□□ 0.11
CLN6-224ENST00000638076 TRBV25-1A0A075B6N4 114 aa15.73■□□□□ 0.11
CLN6-224ENST00000638076 TRAV25A0A0B4J276 109 aa15.73■□□□□ 0.11
CLN6-224ENST00000638076 CCL25O15444 150 aa15.73■□□□□ 0.11
CLN6-224ENST00000638076 RIPPLY3P57055 190 aa15.73■□□□□ 0.11
CLN6-224ENST00000638076 LINC01587Q99440 93 aa15.73■□□□□ 0.11
CLN6-224ENST00000638076 C16orf95Q9H693 158 aa15.73■□□□□ 0.11
CLN6-224ENST00000638076 HELZ2Q9BYK8 2649 aaKnown RBP15.73■□□□□ 0.11
CLN6-224ENST00000638076 UBE2V1Q13404 147 aa15.72■□□□□ 0.11
CLN6-224ENST00000638076 VAMP3Q15836 100 aa15.72■□□□□ 0.11
CLN6-224ENST00000638076 MAPKAPK5-AS1Q8N8E1 139 aa15.72■□□□□ 0.11
CLN6-224ENST00000638076 JMJD8Q96S16 334 aa15.72■□□□□ 0.11
CLN6-224ENST00000638076 IGHV3-73A0A0B4J1V6 119 aa15.72■□□□□ 0.11
CLN6-224ENST00000638076 A6NDN8 102 aa15.71■□□□□ 0.11
CLN6-224ENST00000638076 M0R2P5 195 aa15.71■□□□□ 0.11
CLN6-224ENST00000638076 ZNF415Q09FC8 603 aa15.71■□□□□ 0.11
CLN6-224ENST00000638076 CHAC1Q9BUX1 264 aa15.71■□□□□ 0.11
CLN6-224ENST00000638076 INSP01308 110 aa15.71■□□□□ 0.1
CLN6-224ENST00000638076 TMEM141Q96I45 108 aa15.7■□□□□ 0.1
CLN6-224ENST00000638076 TIMM17AQ99595 171 aa15.7■□□□□ 0.1
CLN6-224ENST00000638076 SCGB2A2Q13296 93 aa15.69■□□□□ 0.1
CLN6-224ENST00000638076 PROK1P58294 105 aa15.69■□□□□ 0.1
CLN6-224ENST00000638076 PMVKQ15126 192 aa15.68■□□□□ 0.1
CLN6-224ENST00000638076 NSUN5P1Q3KNT7 163 aa15.68■□□□□ 0.1
CLN6-224ENST00000638076 STHQ8IWL8 128 aa15.68■□□□□ 0.1
CLN6-224ENST00000638076 A8MWV9 139 aa15.68■□□□□ 0.1
CLN6-224ENST00000638076 I3L3M4 83 aa15.68■□□□□ 0.1
CLN6-224ENST00000638076 RHOHQ15669 191 aa15.68■□□□□ 0.1
CLN6-224ENST00000638076 ZNF418Q8TF45 676 aaPredicted RBP15.68■□□□□ 0.1
CLN6-224ENST00000638076 LINC00467Q9BRT7 94 aa15.68■□□□□ 0.1
CLN6-224ENST00000638076 XCL2Q9UBD3 114 aa15.68■□□□□ 0.1
CLN6-224ENST00000638076 WNK1Q9H4A3 2382 aa15.68■□□□□ 0.1
CLN6-224ENST00000638076 C11orf72Q8NBR9 251 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 CLUHP3Q96NS8 147 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 UNC79Q9P2D8 2635 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 OR11H12B2RN74 326 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 P0DMU3 169 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 FAM231AP0DMU4 169 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 FAM231CP0DMU5 169 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 GCSHP23434 173 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 UFSP1Q6NVU6 142 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 OR11H2Q8NH07 326 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 CST9LQ9H4G1 147 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 EDA2RQ9HAV5 297 aa15.67■□□□□ 0.1
CLN6-224ENST00000638076 IGLV4-69A0A075B6H9 119 aa15.66■□□□□ 0.1
CLN6-224ENST00000638076 H3BRM9 83 aa15.66■□□□□ 0.1
CLN6-224ENST00000638076 EMP1P54849 157 aa15.66■□□□□ 0.1
CLN6-224ENST00000638076 HILS1P60008 231 aa15.66■□□□□ 0.1
CLN6-224ENST00000638076 PIK3CD-AS1Q5SR53 167 aa15.66■□□□□ 0.1
CLN6-224ENST00000638076 SMR3AQ99954 134 aa15.66■□□□□ 0.1
CLN6-224ENST00000638076 AMMECR1LQ6DCA0 310 aa15.65■□□□□ 0.1
CLN6-224ENST00000638076 C11orf86A6NJI1 115 aa15.65■□□□□ 0.1
CLN6-224ENST00000638076 PTH2Q96A98 100 aa15.65■□□□□ 0.1
CLN6-224ENST00000638076 E9PLD3 99 aa15.64■□□□□ 0.09
CLN6-224ENST00000638076 K7EP13 123 aa15.64■□□□□ 0.09
CLN6-224ENST00000638076 FXYD2P54710 66 aa15.64■□□□□ 0.09
CLN6-224ENST00000638076 CFAP126Q5VTH2 177 aa15.64■□□□□ 0.09
CLN6-224ENST00000638076 SAP30O75446 220 aa15.63■□□□□ 0.09
CLN6-224ENST00000638076 C20orf203Q8NBC4 194 aa15.63■□□□□ 0.09
CLN6-224ENST00000638076 PRADC1Q9BSG0 188 aa15.63■□□□□ 0.09
CLN6-224ENST00000638076 MRPL16Q9NX20 251 aaKnown RBP15.63■□□□□ 0.09
CLN6-224ENST00000638076 MTORP42345 2549 aa15.63■□□□□ 0.09
CLN6-224ENST00000638076 MYMXA0A1B0GTQ4 84 aa15.63■□□□□ 0.09
CLN6-224ENST00000638076 SPXQ9BT56 116 aa15.63■□□□□ 0.09
CLN6-224ENST00000638076 PAPPA-AS1Q5QFB9 102 aa15.62■□□□□ 0.09
CLN6-224ENST00000638076 OPRPNQ99935 248 aaPredicted RBP15.62■□□□□ 0.09
CLN6-224ENST00000638076 IGHV3OR16-12A0A075B7B8 117 aa15.62■□□□□ 0.09
CLN6-224ENST00000638076 AZU1P20160 251 aa15.62■□□□□ 0.09
CLN6-224ENST00000638076 RBX1P62877 108 aa15.62■□□□□ 0.09
CLN6-224ENST00000638076 Q6ZSN1 163 aa15.62■□□□□ 0.09
CLN6-224ENST00000638076 RAB37Q96AX2 223 aa15.62■□□□□ 0.09
CLN6-224ENST00000638076 C9orf118A6NHY6 69 aa15.61■□□□□ 0.09
CLN6-224ENST00000638076 CEND1Q8N111 149 aa15.61■□□□□ 0.09
CLN6-224ENST00000638076 C1orf158Q8N1D5 194 aa15.61■□□□□ 0.09
CLN6-224ENST00000638076 TNFRSF18Q9Y5U5 241 aa15.61■□□□□ 0.09
CLN6-224ENST00000638076 OR4C5Q8NGB2 326 aa15.61■□□□□ 0.09
CLN6-224ENST00000638076 Q9UF83 564 aa15.61■□□□□ 0.09
CLN6-224ENST00000638076 SETD2Q9BYW2 2564 aaPredicted RBP15.6■□□□□ 0.09
CLN6-224ENST00000638076 RNASE8Q8TDE3 154 aaKnown RBP15.6■□□□□ 0.09
CLN6-224ENST00000638076 BEAN1Q3B7T3 259 aa15.6■□□□□ 0.09
CLN6-224ENST00000638076 TM2D2Q9BX73 214 aa15.6■□□□□ 0.09
CLN6-224ENST00000638076 NACAE9PAV3 2078 aa15.59■□□□□ 0.09
CLN6-224ENST00000638076 ADARB2-AS1A8MUL3 147 aa15.59■□□□□ 0.09
CLN6-224ENST00000638076 H3BUT2 72 aa15.59■□□□□ 0.09
CLN6-224ENST00000638076 RHODO00212 210 aa15.59■□□□□ 0.09
CLN6-224ENST00000638076 ZNRF2Q8NHG8 242 aa15.59■□□□□ 0.09
CLN6-224ENST00000638076 NAA38Q9BRA0 125 aaKnown RBP15.59■□□□□ 0.09
CLN6-224ENST00000638076 NDUFA7O95182 113 aa15.57■□□□□ 0.08
CLN6-224ENST00000638076 SMIM13P0DJ93 91 aa15.57■□□□□ 0.08
CLN6-224ENST00000638076 TAL2Q16559 108 aa15.57■□□□□ 0.08
CLN6-224ENST00000638076 FASNP49327 2511 aaKnown RBP15.57■□□□□ 0.08
CLN6-224ENST00000638076 HERVK_113P61574 105 aa15.57■□□□□ 0.08
CLN6-224ENST00000638076 TMEM170BQ5T4T1 132 aa15.57■□□□□ 0.08
CLN6-224ENST00000638076 HIST1H4GQ99525 98 aa15.57■□□□□ 0.08
CLN6-224ENST00000638076 ZNF815PA8K554 130 aa15.56■□□□□ 0.08
CLN6-224ENST00000638076 RS1O15537 224 aa15.56■□□□□ 0.08
CLN6-224ENST00000638076 IGLV1-51P01701 117 aa15.56■□□□□ 0.08
CLN6-224ENST00000638076 NIPBLQ6KC79 2804 aaeCLIP15.56■□□□□ 0.08
CLN6-224ENST00000638076 IGLV4-3A0A075B6K6 122 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms