RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 RNASE13Q5GAN3 156 aaKnown RBP11.8□□□□□ -0.52
UBE3A-227ENST00000638011 CENPVL3A0A0U1RRI6 287 aa11.8□□□□□ -0.52
UBE3A-227ENST00000638011 TFF1P04155 84 aa11.79□□□□□ -0.52
UBE3A-227ENST00000638011 HOXB4P17483 251 aaPredicted RBP11.79□□□□□ -0.52
UBE3A-227ENST00000638011 CFHR3Q02985 330 aa11.79□□□□□ -0.52
UBE3A-227ENST00000638011 Q8NFD4 153 aa11.79□□□□□ -0.52
UBE3A-227ENST00000638011 MLANAQ16655 118 aa11.79□□□□□ -0.52
UBE3A-227ENST00000638011 TRBV30A0A0K0K1B3 111 aa11.79□□□□□ -0.52
UBE3A-227ENST00000638011 C15orf65H3BRN8 121 aa11.79□□□□□ -0.52
UBE3A-227ENST00000638011 RPL39LQ96EH5 51 aaKnown RBP11.79□□□□□ -0.52
UBE3A-227ENST00000638011 NOP10Q9NPE3 64 aaKnown RBP11.79□□□□□ -0.52
UBE3A-227ENST00000638011 PRB2P02812 416 aaPredicted RBP11.78□□□□□ -0.52
UBE3A-227ENST00000638011 DAND5Q8N907 189 aa11.78□□□□□ -0.52
UBE3A-227ENST00000638011 C17orf58Q2M2W7 97 aa11.78□□□□□ -0.52
UBE3A-227ENST00000638011 PRB1P04280 392 aa11.78□□□□□ -0.52
UBE3A-227ENST00000638011 TRBV10-1A0A0K0K1A3 114 aa11.78□□□□□ -0.52
UBE3A-227ENST00000638011 PIK3CD-AS1Q5SR53 167 aa11.78□□□□□ -0.52
UBE3A-227ENST00000638011 B9D2Q9BPU9 175 aa11.78□□□□□ -0.52
UBE3A-227ENST00000638011 GP9P14770 177 aa11.78□□□□□ -0.52
UBE3A-227ENST00000638011 C1orf147Q96MC9 270 aaPredicted RBP11.78□□□□□ -0.52
UBE3A-227ENST00000638011 C14orf177Q52M58 125 aa11.78□□□□□ -0.52
UBE3A-227ENST00000638011 LYNX1G3V0Z9 82 aa11.77□□□□□ -0.53
UBE3A-227ENST00000638011 LYNX1P0DP58 116 aa11.77□□□□□ -0.53
UBE3A-227ENST00000638011 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.53
UBE3A-227ENST00000638011 IGKV2D-26A0A0A0MRZ7 120 aa11.76□□□□□ -0.53
UBE3A-227ENST00000638011 DEFB121Q5J5C9 76 aa11.76□□□□□ -0.53
UBE3A-227ENST00000638011 IGHV3-30-3P0DP02 117 aa11.76□□□□□ -0.53
UBE3A-227ENST00000638011 C5orf38Q86SI9 138 aa11.76□□□□□ -0.53
UBE3A-227ENST00000638011 MTORP42345 2549 aa11.76□□□□□ -0.53
UBE3A-227ENST00000638011 RBX1P62877 108 aa11.76□□□□□ -0.53
UBE3A-227ENST00000638011 AGPAT4-IT1Q9H0P7 198 aa11.76□□□□□ -0.53
UBE3A-227ENST00000638011 BRD3OSQ6XYD6 125 aa11.75□□□□□ -0.53
UBE3A-227ENST00000638011 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
UBE3A-227ENST00000638011 CSRP1P21291 193 aaKnown RBP11.75□□□□□ -0.53
UBE3A-227ENST00000638011 MIR7-3HGQ8N6C7 128 aa11.75□□□□□ -0.53
UBE3A-227ENST00000638011 C3orf56Q8N813 242 aa11.75□□□□□ -0.53
UBE3A-227ENST00000638011 A0A0G2JNJ9 132 aa11.74□□□□□ -0.53
UBE3A-227ENST00000638011 CLPSP04118 112 aa11.74□□□□□ -0.53
UBE3A-227ENST00000638011 Q9UFV3 132 aa11.74□□□□□ -0.53
UBE3A-227ENST00000638011 A0A0J9YXV3 536 aa11.74□□□□□ -0.53
UBE3A-227ENST00000638011 GYPEP15421 78 aa11.74□□□□□ -0.53
UBE3A-227ENST00000638011 UFSP1Q6NVU6 142 aa11.74□□□□□ -0.53
UBE3A-227ENST00000638011 LTBP1Q14766 1721 aa11.74□□□□□ -0.53
UBE3A-227ENST00000638011 ENHOQ6UWT2 76 aa11.74□□□□□ -0.53
UBE3A-227ENST00000638011 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
UBE3A-227ENST00000638011 K7ENP7 123 aa11.73□□□□□ -0.53
UBE3A-227ENST00000638011 C17orf77Q96MU5 243 aa11.73□□□□□ -0.53
UBE3A-227ENST00000638011 SPTBN4Q9H254 2564 aa11.73□□□□□ -0.53
UBE3A-227ENST00000638011 TP73-AS1Q9UF72 201 aa11.73□□□□□ -0.53
UBE3A-227ENST00000638011 LINC00205P59089 165 aa11.72□□□□□ -0.53
UBE3A-227ENST00000638011 ANKRD17O75179 2603 aaKnown RBP11.72□□□□□ -0.53
UBE3A-227ENST00000638011 BPESC1Q9GZL8 116 aa11.72□□□□□ -0.53
UBE3A-227ENST00000638011 GNRH2O43555 120 aa11.72□□□□□ -0.53
UBE3A-227ENST00000638011 CCL18P55774 89 aa11.72□□□□□ -0.53
UBE3A-227ENST00000638011 MUC7Q8TAX7 377 aa11.72□□□□□ -0.53
UBE3A-227ENST00000638011 ASPHD1Q5U4P2 390 aa11.72□□□□□ -0.53
UBE3A-227ENST00000638011 SPART-AS1P0CW21 52 aa11.72□□□□□ -0.53
UBE3A-227ENST00000638011 B3GALT5-AS1P59052 145 aa11.72□□□□□ -0.53
UBE3A-227ENST00000638011 C2orf70A6NJV1 201 aa11.71□□□□□ -0.53
UBE3A-227ENST00000638011 ZNF524Q96C55 264 aa11.71□□□□□ -0.53
UBE3A-227ENST00000638011 LYPD2Q6UXB3 125 aa11.71□□□□□ -0.53
UBE3A-227ENST00000638011 NRACQ8N912 160 aa11.71□□□□□ -0.53
UBE3A-227ENST00000638011 WDR86Q86TI4 376 aa11.71□□□□□ -0.54
UBE3A-227ENST00000638011 Q8N9L7 120 aa11.71□□□□□ -0.54
UBE3A-227ENST00000638011 FAM222AQ5U5X8 452 aa11.71□□□□□ -0.54
UBE3A-227ENST00000638011 IGLV3-1P01715 115 aa11.71□□□□□ -0.54
UBE3A-227ENST00000638011 SPAG11BQ08648 103 aa11.71□□□□□ -0.54
UBE3A-227ENST00000638011 NPBQ8NG41 125 aa11.71□□□□□ -0.54
UBE3A-227ENST00000638011 IGKV1OR2-108A0A075B7D4 117 aa11.7□□□□□ -0.54
UBE3A-227ENST00000638011 IBA57-AS1B1ANH7 110 aa11.7□□□□□ -0.54
UBE3A-227ENST00000638011 USP9XQ93008 2570 aaPredicted RBP11.7□□□□□ -0.54
UBE3A-227ENST00000638011 NAV2Q8IVL1 2488 aa11.69□□□□□ -0.54
UBE3A-227ENST00000638011 TRAV7A0A075B6U4 112 aa11.69□□□□□ -0.54
UBE3A-227ENST00000638011 HHLA3Q9XRX5 114 aa11.69□□□□□ -0.54
UBE3A-227ENST00000638011 GATA1P15976 413 aaPredicted RBP11.69□□□□□ -0.54
UBE3A-227ENST00000638011 SMIM9A6NGZ8 99 aa11.68□□□□□ -0.54
UBE3A-227ENST00000638011 IGHV4OR15-8A0A075B7B6 117 aa11.68□□□□□ -0.54
UBE3A-227ENST00000638011 A0A087WW49 117 aa11.68□□□□□ -0.54
UBE3A-227ENST00000638011 G3V318 75 aa11.68□□□□□ -0.54
UBE3A-227ENST00000638011 PINLYPA6NC86 204 aa11.68□□□□□ -0.54
UBE3A-227ENST00000638011 FHL1Q13642 323 aa11.68□□□□□ -0.54
UBE3A-227ENST00000638011 A0A1B0GXF2 115 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 C17orf82Q86X59 251 aaPredicted RBP11.67□□□□□ -0.54
UBE3A-227ENST00000638011 TMEM263Q8WUH6 116 aaKnown RBP11.67□□□□□ -0.54
UBE3A-227ENST00000638011 FAM167A-AS1Q96KT0 104 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 MLST8Q9BVC4 326 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 VPREB3Q9UKI3 123 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 RPL39P62891 51 aaKnown RBP11.67□□□□□ -0.54
UBE3A-227ENST00000638011 C5orf24Q7Z6I8 188 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 ODF3Q96PU9 254 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 ZNF581Q9P0T4 197 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 NUPR1O60356 82 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 LINC00173Q6ZV60 143 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 NCOR2Q9Y618 2525 aa11.67□□□□□ -0.54
UBE3A-227ENST00000638011 MIFP14174 115 aa11.66□□□□□ -0.54
UBE3A-227ENST00000638011 ZFHX2Q9C0A1 2572 aaPredicted RBP11.66□□□□□ -0.54
UBE3A-227ENST00000638011 UBE2D2P62837 147 aa11.66□□□□□ -0.54
UBE3A-227ENST00000638011 E7EQL1 145 aa11.66□□□□□ -0.54
UBE3A-227ENST00000638011 YPEL4Q96NS1 127 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms