RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 Q0VG73 95 aa13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 DAZ2Q13117 558 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 DAZ4Q86SG3 579 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 C1orf158Q8N1D5 194 aa13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 DAZ3Q9NR90 486 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 TMEM14CQ9P0S9 112 aa13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 FGF23Q9GZV9 251 aaPredicted RBP13.08□□□□□ -0.31
CACNA1A-253ENST00000637927 MDFICQ9P1T7 246 aa13.08□□□□□ -0.31
CACNA1A-253ENST00000637927 DEFB131BA0A096LNP1 70 aa13.08□□□□□ -0.32
CACNA1A-253ENST00000637927 SDIM1Q6ZPB5 146 aa13.08□□□□□ -0.32
CACNA1A-253ENST00000637927 LGALS9O00182 355 aa13.08□□□□□ -0.32
CACNA1A-253ENST00000637927 COX7BP24311 80 aa13.08□□□□□ -0.32
CACNA1A-253ENST00000637927 WFDC13Q8IUB5 93 aa13.08□□□□□ -0.32
CACNA1A-253ENST00000637927 PRAC2D3DTV9 90 aa13.08□□□□□ -0.32
CACNA1A-253ENST00000637927 ADORA2A-AS1P86434 159 aa13.07□□□□□ -0.32
CACNA1A-253ENST00000637927 TRBV7-3A0A075B6L6 115 aa13.07□□□□□ -0.32
CACNA1A-253ENST00000637927 C22orf34Q6ZV56 151 aa13.07□□□□□ -0.32
CACNA1A-253ENST00000637927 DENND4CQ5VZ89 1909 aa13.07□□□□□ -0.32
CACNA1A-253ENST00000637927 PIP4P1Q86T03 277 aa13.07□□□□□ -0.32
CACNA1A-253ENST00000637927 TANC1Q9C0D5 1861 aa13.07□□□□□ -0.32
CACNA1A-253ENST00000637927 FAM30AQ9NZY2 134 aa13.06□□□□□ -0.32
CACNA1A-253ENST00000637927 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
CACNA1A-253ENST00000637927 IGF1P05019 195 aa13.06□□□□□ -0.32
CACNA1A-253ENST00000637927 LINC00311Q8N616 119 aa13.06□□□□□ -0.32
CACNA1A-253ENST00000637927 SLX1AQ9BQ83 275 aa13.06□□□□□ -0.32
CACNA1A-253ENST00000637927 C7orf33Q8WU49 177 aa13.06□□□□□ -0.32
CACNA1A-253ENST00000637927 DNAJC9-AS1A6NH13 148 aa13.05□□□□□ -0.32
CACNA1A-253ENST00000637927 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
CACNA1A-253ENST00000637927 ZNF106Q9H2Y7 1883 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-253ENST00000637927 SERTAD4-AS1Q5TG53 156 aa13.05□□□□□ -0.32
CACNA1A-253ENST00000637927 CIRBP-AS1Q8TBR5 109 aa13.05□□□□□ -0.32
CACNA1A-253ENST00000637927 SNURFQ9Y675 71 aa13.05□□□□□ -0.32
CACNA1A-253ENST00000637927 IGHV7-81A0A0B4J1V7 117 aa13.05□□□□□ -0.32
CACNA1A-253ENST00000637927 NANOS2P60321 138 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-253ENST00000637927 LGALS9BQ3B8N2 356 aa13.04□□□□□ -0.32
CACNA1A-253ENST00000637927 LGALS9CQ6DKI2 356 aa13.04□□□□□ -0.32
CACNA1A-253ENST00000637927 ZFAND3Q9H8U3 227 aa13.04□□□□□ -0.32
CACNA1A-253ENST00000637927 NBASA2RRP1 2371 aa13.04□□□□□ -0.32
CACNA1A-253ENST00000637927 BPY2O14599 106 aa13.04□□□□□ -0.32
CACNA1A-253ENST00000637927 Q6Q795 121 aa13.04□□□□□ -0.32
CACNA1A-253ENST00000637927 TNRC6AQ8NDV7 1962 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-253ENST00000637927 C11orf53Q8IXP5 236 aa13.04□□□□□ -0.32
CACNA1A-253ENST00000637927 KAAG1Q9UBP8 84 aa13.04□□□□□ -0.32
CACNA1A-253ENST00000637927 Q6ZVQ6 151 aa13.03□□□□□ -0.32
CACNA1A-253ENST00000637927 PTH2Q96A98 100 aa13.02□□□□□ -0.32
CACNA1A-253ENST00000637927 NOTCH4Q99466 2003 aa13.02□□□□□ -0.32
CACNA1A-253ENST00000637927 RIF1Q5UIP0 2472 aaKnown RBP13.02□□□□□ -0.32
CACNA1A-253ENST00000637927 TMEM190Q8WZ59 177 aa13.02□□□□□ -0.33
CACNA1A-253ENST00000637927 SERP1Q9Y6X1 66 aa13.02□□□□□ -0.33
CACNA1A-253ENST00000637927 PKDREJQ9NTG1 2253 aa13.02□□□□□ -0.33
CACNA1A-253ENST00000637927 C1orf147Q96MC9 270 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-253ENST00000637927 CDPF1Q6NVV7 123 aa13.01□□□□□ -0.33
CACNA1A-253ENST00000637927 C5orf56Q8N8D9 126 aa13.01□□□□□ -0.33
CACNA1A-253ENST00000637927 Q6ZUT4 128 aa13.01□□□□□ -0.33
CACNA1A-253ENST00000637927 C11orf52Q96A22 123 aa13.01□□□□□ -0.33
CACNA1A-253ENST00000637927 NDUFV3P56181 108 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-253ENST00000637927 WISP2O76076 250 aa13□□□□□ -0.33
CACNA1A-253ENST00000637927 WFDC2Q14508 124 aa13□□□□□ -0.33
CACNA1A-253ENST00000637927 FAM222AQ5U5X8 452 aa13□□□□□ -0.33
CACNA1A-253ENST00000637927 ENHOQ6UWT2 76 aa13□□□□□ -0.33
CACNA1A-253ENST00000637927 REG3AQ06141 175 aa12.99□□□□□ -0.33
CACNA1A-253ENST00000637927 SPTAN1Q13813 2472 aaKnown RBP12.99□□□□□ -0.33
CACNA1A-253ENST00000637927 HILS1P60008 231 aa12.99□□□□□ -0.33
CACNA1A-253ENST00000637927 LINC01620Q4KN68 170 aa12.99□□□□□ -0.33
CACNA1A-253ENST00000637927 C20orf78Q9BR46 151 aa12.99□□□□□ -0.33
CACNA1A-253ENST00000637927 POU2AF1Q16633 256 aa12.98□□□□□ -0.33
CACNA1A-253ENST00000637927 NUP210Q8TEM1 1887 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-253ENST00000637927 H3BUA1 57 aa12.97□□□□□ -0.33
CACNA1A-253ENST00000637927 C4orf3Q8WVX3 66 aa12.97□□□□□ -0.33
CACNA1A-253ENST00000637927 SPANXA1Q9NS26 97 aa12.97□□□□□ -0.33
CACNA1A-253ENST00000637927 KIR2DL5BQ8NHK3 375 aa12.97□□□□□ -0.33
CACNA1A-253ENST00000637927 C10orf105Q8TEF2 133 aa12.97□□□□□ -0.33
CACNA1A-253ENST00000637927 IGHV1-58A0A0C4DH39 117 aa12.97□□□□□ -0.33
CACNA1A-253ENST00000637927 Q6ZTI0 123 aa12.96□□□□□ -0.33
CACNA1A-253ENST00000637927 PRM2P04554 102 aa12.96□□□□□ -0.33
CACNA1A-253ENST00000637927 UNQ9165/PRO28630Q6UXU0 137 aa12.96□□□□□ -0.33
CACNA1A-253ENST00000637927 PRR15LQ9BU68 103 aa12.96□□□□□ -0.33
CACNA1A-253ENST00000637927 I3L2K1 104 aa12.96□□□□□ -0.33
CACNA1A-253ENST00000637927 TEN1Q86WV5 123 aa12.96□□□□□ -0.33
CACNA1A-253ENST00000637927 A6NED7 52 aa12.96□□□□□ -0.33
CACNA1A-253ENST00000637927 RNF152Q8N8N0 203 aa12.96□□□□□ -0.34
CACNA1A-253ENST00000637927 MED13Q9UHV7 2174 aa12.96□□□□□ -0.34
CACNA1A-253ENST00000637927 PIK3CD-AS1Q5SR53 167 aa12.96□□□□□ -0.34
CACNA1A-253ENST00000637927 PRYO14603 147 aa12.95□□□□□ -0.34
CACNA1A-253ENST00000637927 C2orf16Q68DN1 1984 aa12.95□□□□□ -0.34
CACNA1A-253ENST00000637927 IGLV2-14P01704 120 aa12.95□□□□□ -0.34
CACNA1A-253ENST00000637927 TMEM89A2RUT3 159 aa12.94□□□□□ -0.34
CACNA1A-253ENST00000637927 K7EIM0 57 aa12.94□□□□□ -0.34
CACNA1A-253ENST00000637927 C16orf54Q6UWD8 224 aa12.94□□□□□ -0.34
CACNA1A-253ENST00000637927 OBSL1O75147 1896 aa12.94□□□□□ -0.34
CACNA1A-253ENST00000637927 MRPL55Q7Z7F7 128 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-253ENST00000637927 PLA2G5P39877 138 aa12.93□□□□□ -0.34
CACNA1A-253ENST00000637927 MUC4Q99102 2169 aa12.93□□□□□ -0.34
CACNA1A-253ENST00000637927 TMEM256-PLSCR3K7ERE1 68 aa12.93□□□□□ -0.34
CACNA1A-253ENST00000637927 SERP2Q8N6R1 65 aa12.93□□□□□ -0.34
CACNA1A-253ENST00000637927 WFDC10AQ9H1F0 79 aa12.93□□□□□ -0.34
CACNA1A-253ENST00000637927 NCOA6Q14686 2063 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-253ENST00000637927 PROK1P58294 105 aa12.93□□□□□ -0.34
CACNA1A-253ENST00000637927 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-253ENST00000637927 E7EUB6 86 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms