RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 TNFRSF18Q9Y5U5 241 aa7.15□□□□□ -1.27
CACNA1A-248ENST00000637774 CRXO43186 299 aaPredicted RBP7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 MAST4O15021 2626 aa7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 RBMY1A1P0DJD3 496 aaKnown RBP7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 RBMY1CP0DJD4 496 aa7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 GCSHP23434 173 aa7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 RBMY1FQ15415 496 aaKnown RBP7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 TMEM170BQ5T4T1 132 aa7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 IGHV3-64A0A075B6Q5 118 aa7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 VCYO14598 125 aa7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 PPP1R17O96001 155 aa7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 RNASE13Q5GAN3 156 aaKnown RBP7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 Q8N2B8 174 aa7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 OTOGQ6ZRI0 2925 aa7.14□□□□□ -1.27
CACNA1A-248ENST00000637774 PDZD2O15018 2839 aa7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 TRBV7-9A0A0J9YWB2 115 aa7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 RBMY1BA6NDE4 496 aaKnown RBP7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 RBMY1EA6NEQ0 496 aaKnown RBP7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 RBMY1DP0C7P1 496 aaKnown RBP7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 KRTAP1-1Q07627 177 aa7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 ZNF415Q09FC8 603 aa7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 OPRPNQ99935 248 aaPredicted RBP7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 KMT2BQ9UMN6 2715 aaPredicted RBP7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 GAGE12BA1L429 117 aa7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 RNASE1P07998 156 aaKnown RBP7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 ODF3L2Q3SX64 289 aa7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 FAM19A4Q96LR4 140 aa7.13□□□□□ -1.27
CACNA1A-248ENST00000637774 IGHV4-4A0A075B6R2 117 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 TRAV26-1A0A087WT03 109 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 CRYBA4P53673 196 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 ODF1Q14990 250 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 TMEM97Q5BJF2 176 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 SHISA2Q6UWI4 295 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 SCGB1D4Q6XE38 83 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 RNF152Q8N8N0 203 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 TRGV2A0A075B6R0 118 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 K7EMI3 77 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 HILS1P60008 231 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 DGAT2L7PQ6IED9 249 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 AMTNQ6UX39 209 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 C12orf54Q6X4T0 127 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 C20orf78Q9BR46 151 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 AMMECR1LQ6DCA0 310 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 SCRT2Q9NQ03 307 aa7.12□□□□□ -1.27
CACNA1A-248ENST00000637774 COX8AP10176 69 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 AZU1P20160 251 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 RRN3P1Q2M238 152 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 PRSS29PA6NIE9 313 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 OR11H2Q8NH07 326 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 MRPS16Q9Y3D3 137 aaKnown RBP7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 NSD1Q96L73 2696 aaPredicted RBP7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 IGLV2-18A0A075B6J9 118 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 IGKV2D-26A0A0A0MRZ7 120 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 A0A1B0GV72 72 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 H7C1H1 209 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 CRYGDP07320 174 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 ZFP2Q6ZN57 461 aa7.11□□□□□ -1.27
CACNA1A-248ENST00000637774 G3V4G9 280 aa7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 TAX1BP3O14907 124 aa7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 MED14OSP0DP75 135 aa7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 NOP10Q9NPE3 64 aaKnown RBP7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 M0R2P5 195 aa7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 GAGE7O76087 117 aa7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 GAGE12FP0CL80 117 aa7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 GAGE12GP0CL81 117 aa7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 GAGE12IP0CL82 117 aa7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 TRPT1Q86TN4 253 aaKnown RBP7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 Q9UF83 564 aa7.1□□□□□ -1.27
CACNA1A-248ENST00000637774 IGKV3OR2-268A0A0C4DH90 116 aa7.09□□□□□ -1.27
CACNA1A-248ENST00000637774 CEMP1Q6PRD7 247 aaPredicted RBP7.09□□□□□ -1.27
CACNA1A-248ENST00000637774 DEFB125Q8N687 156 aa7.09□□□□□ -1.27
CACNA1A-248ENST00000637774 C9orf85Q96MD7 179 aa7.09□□□□□ -1.27
CACNA1A-248ENST00000637774 DEFB130BP0DP73 79 aa7.09□□□□□ -1.27
CACNA1A-248ENST00000637774 DEFB130AP0DP74 79 aa7.09□□□□□ -1.27
CACNA1A-248ENST00000637774 ODF3Q96PU9 254 aa7.09□□□□□ -1.27
CACNA1A-248ENST00000637774 A0A087WX48 190 aa7.09□□□□□ -1.27
CACNA1A-248ENST00000637774 F8VRH5 84 aa7.09□□□□□ -1.27
CACNA1A-248ENST00000637774 STAB1Q9NY15 2570 aa7.09□□□□□ -1.28
CACNA1A-248ENST00000637774 M0QY20 66 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 ZNRF2Q8NHG8 242 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 HIST1H4GQ99525 98 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 VCX2Q9H322 139 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 LINC00315P59091 139 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 SRSF9Q13242 221 aaKnown RBP eCLIP7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 BAALCQ8WXS3 180 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 A8MWV9 139 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 SMAGPQ0VAQ4 97 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 BVES-AS1Q5T3Y7 98 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 KIF25-AS1Q9Y6Z4 181 aa7.08□□□□□ -1.28
CACNA1A-248ENST00000637774 I3L3M4 83 aa7.07□□□□□ -1.28
CACNA1A-248ENST00000637774 Q6ZTI0 123 aa7.07□□□□□ -1.28
CACNA1A-248ENST00000637774 TOMM6Q96B49 74 aa7.07□□□□□ -1.28
CACNA1A-248ENST00000637774 ZNF479Q96JC4 524 aa7.07□□□□□ -1.28
CACNA1A-248ENST00000637774 GTSF1LQ9H1H1 148 aa7.07□□□□□ -1.28
CACNA1A-248ENST00000637774 GAGE12JA6NER3 117 aa7.07□□□□□ -1.28
CACNA1A-248ENST00000637774 GAGE4Q13068 117 aa7.07□□□□□ -1.28
CACNA1A-248ENST00000637774 GAGE5Q13069 117 aa7.07□□□□□ -1.28
CACNA1A-248ENST00000637774 GAGE13Q4V321 117 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms