RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 LINC00612Q8N6U2 182 aa15□□□□□ -0.01
CLN8-213ENST00000637156 PRSS3P2Q8NHM4 247 aa15□□□□□ -0.01
CLN8-213ENST00000637156 NACAE9PAV3 2078 aa15□□□□□ -0.01
CLN8-213ENST00000637156 TRAV4A0A0B4J268 109 aa14.99□□□□□ -0.01
CLN8-213ENST00000637156 IGHV3-53P01767 116 aa14.99□□□□□ -0.01
CLN8-213ENST00000637156 FAM222AQ5U5X8 452 aa14.99□□□□□ -0.01
CLN8-213ENST00000637156 RHODO00212 210 aa14.99□□□□□ -0.01
CLN8-213ENST00000637156 DEFB130BP0DP73 79 aa14.99□□□□□ -0.01
CLN8-213ENST00000637156 DEFB130AP0DP74 79 aa14.99□□□□□ -0.01
CLN8-213ENST00000637156 Q9UF83 564 aa14.99□□□□□ -0.01
CLN8-213ENST00000637156 RNASEKQ6P5S7 137 aaKnown RBP14.98□□□□□ -0.01
CLN8-213ENST00000637156 MAP1LC3AQ9H492 121 aa14.98□□□□□ -0.01
CLN8-213ENST00000637156 DKK2Q9UBU2 259 aa14.98□□□□□ -0.01
CLN8-213ENST00000637156 IGLV2-18A0A075B6J9 118 aa14.97□□□□□ -0.01
CLN8-213ENST00000637156 PPP1R17O96001 155 aa14.97□□□□□ -0.01
CLN8-213ENST00000637156 P0DMU3 169 aa14.97□□□□□ -0.01
CLN8-213ENST00000637156 FAM231AP0DMU4 169 aa14.97□□□□□ -0.01
CLN8-213ENST00000637156 FAM231CP0DMU5 169 aa14.97□□□□□ -0.01
CLN8-213ENST00000637156 SUMO2P61956 95 aaKnown RBP14.97□□□□□ -0.01
CLN8-213ENST00000637156 C20orf78Q9BR46 151 aa14.97□□□□□ -0.01
CLN8-213ENST00000637156 EDA2RQ9HAV5 297 aa14.97□□□□□ -0.01
CLN8-213ENST00000637156 LYRM9A8MSI8 78 aa14.96□□□□□ -0.01
CLN8-213ENST00000637156 MRAPQ8TCY5 172 aa14.96□□□□□ -0.01
CLN8-213ENST00000637156 CHCHD1Q96BP2 118 aaKnown RBP14.96□□□□□ -0.01
CLN8-213ENST00000637156 C18orf15Q96N68 181 aa14.96□□□□□ -0.01
CLN8-213ENST00000637156 FAM19A2Q8N3H0 131 aa14.95□□□□□ -0.02
CLN8-213ENST00000637156 SCGB1D1O95968 90 aa14.94□□□□□ -0.02
CLN8-213ENST00000637156 DDTP30046 118 aa14.94□□□□□ -0.02
CLN8-213ENST00000637156 Q8N8P6 123 aa14.94□□□□□ -0.02
CLN8-213ENST00000637156 AP5S1Q9NUS5 200 aa14.94□□□□□ -0.02
CLN8-213ENST00000637156 CELA1Q9UNI1 258 aa14.94□□□□□ -0.02
CLN8-213ENST00000637156 TENM3Q9P273 2699 aa14.94□□□□□ -0.02
CLN8-213ENST00000637156 TRBV6-5A0A0K0K1A5 114 aa14.93□□□□□ -0.02
CLN8-213ENST00000637156 HSBP1O75506 76 aa14.93□□□□□ -0.02
CLN8-213ENST00000637156 POLR2KP53803 58 aaKnown RBP14.93□□□□□ -0.02
CLN8-213ENST00000637156 DEFA6Q01524 100 aa14.93□□□□□ -0.02
CLN8-213ENST00000637156 FA2HQ7L5A8 372 aa14.93□□□□□ -0.02
CLN8-213ENST00000637156 ZNF664Q8N3J9 261 aa14.93□□□□□ -0.02
CLN8-213ENST00000637156 ST20Q9HBF5 79 aa14.93□□□□□ -0.02
CLN8-213ENST00000637156 NXT2Q9NPJ8 142 aaKnown RBP14.93□□□□□ -0.02
CLN8-213ENST00000637156 H7C1H1 209 aa14.93□□□□□ -0.02
CLN8-213ENST00000637156 PMCHL1Q16048 86 aa14.93□□□□□ -0.02
CLN8-213ENST00000637156 LINC01546A6NGU7 62 aa14.92□□□□□ -0.02
CLN8-213ENST00000637156 CIDEAO60543 219 aa14.92□□□□□ -0.02
CLN8-213ENST00000637156 FHL2Q14192 279 aa14.92□□□□□ -0.02
CLN8-213ENST00000637156 TM2D3Q9BRN9 247 aa14.92□□□□□ -0.02
CLN8-213ENST00000637156 TMEM70Q9BUB7 260 aa14.92□□□□□ -0.02
CLN8-213ENST00000637156 SMIM2Q9BVW6 85 aa14.92□□□□□ -0.02
CLN8-213ENST00000637156 SPART-AS1P0CW21 52 aa14.91□□□□□ -0.02
CLN8-213ENST00000637156 SLC25A29Q8N8R3 303 aa14.91□□□□□ -0.02
CLN8-213ENST00000637156 SDHAF1A6NFY7 115 aa14.91□□□□□ -0.02
CLN8-213ENST00000637156 PMCHP20382 165 aa14.91□□□□□ -0.02
CLN8-213ENST00000637156 TCAPO15273 167 aa14.9□□□□□ -0.02
CLN8-213ENST00000637156 AMTP48728 403 aa14.9□□□□□ -0.02
CLN8-213ENST00000637156 NEGR1Q7Z3B1 354 aa14.9□□□□□ -0.02
CLN8-213ENST00000637156 NEXN-AS1Q8NBZ9 246 aa14.9□□□□□ -0.02
CLN8-213ENST00000637156 HUWE1Q7Z6Z7 4374 aaKnown RBP14.89□□□□□ -0.03
CLN8-213ENST00000637156 IGHV1-24A0A0C4DH33 117 aa14.89□□□□□ -0.03
CLN8-213ENST00000637156 RPL32P62910 135 aaKnown RBP14.89□□□□□ -0.03
CLN8-213ENST00000637156 TRGV4A0A0C4DH28 118 aa14.89□□□□□ -0.03
CLN8-213ENST00000637156 TRBV27A0A0K0K1C4 114 aa14.89□□□□□ -0.03
CLN8-213ENST00000637156 DEFB104AQ8WTQ1 72 aa14.89□□□□□ -0.03
CLN8-213ENST00000637156 SPATA25Q9BR10 227 aa14.89□□□□□ -0.03
CLN8-213ENST00000637156 PRO1933Q9H354 126 aa14.89□□□□□ -0.03
CLN8-213ENST00000637156 VCYO14598 125 aa14.88□□□□□ -0.03
CLN8-213ENST00000637156 DAD1P61803 113 aa14.88□□□□□ -0.03
CLN8-213ENST00000637156 TNFRSF18Q9Y5U5 241 aa14.88□□□□□ -0.03
CLN8-213ENST00000637156 A0A096LNJ9 63 aa14.87□□□□□ -0.03
CLN8-213ENST00000637156 TEX43Q6ZNM6 134 aa14.87□□□□□ -0.03
CLN8-213ENST00000637156 TRBV6-4A0A1B0GX49 114 aa14.86□□□□□ -0.03
CLN8-213ENST00000637156 K7EQD1 137 aa14.86□□□□□ -0.03
CLN8-213ENST00000637156 DNAJC30Q96LL9 226 aa14.86□□□□□ -0.03
CLN8-213ENST00000637156 C11orf68Q9H3H3 251 aaKnown RBP14.86□□□□□ -0.03
CLN8-213ENST00000637156 HHLA3Q9XRX5 114 aa14.86□□□□□ -0.03
CLN8-213ENST00000637156 LAGE3Q14657 143 aa14.85□□□□□ -0.03
CLN8-213ENST00000637156 ZNRF2Q8NHG8 242 aa14.85□□□□□ -0.03
CLN8-213ENST00000637156 C14orf144Q96I85 54 aa14.85□□□□□ -0.03
CLN8-213ENST00000637156 DNAH9Q9NYC9 4486 aa14.85□□□□□ -0.03
CLN8-213ENST00000637156 A0A0J9YWU9 116 aa14.84□□□□□ -0.03
CLN8-213ENST00000637156 TRBV10-1A0A0K0K1A3 114 aa14.84□□□□□ -0.03
CLN8-213ENST00000637156 C12orf74Q32Q52 190 aa14.84□□□□□ -0.03
CLN8-213ENST00000637156 LBHQ53QV2 105 aaPredicted RBP14.84□□□□□ -0.03
CLN8-213ENST00000637156 TRBV7-3A0A075B6L6 115 aa14.84□□□□□ -0.03
CLN8-213ENST00000637156 LOC100131303A0A0U1RQF7 123 aa14.83□□□□□ -0.04
CLN8-213ENST00000637156 I3L3M4 83 aa14.82□□□□□ -0.04
CLN8-213ENST00000637156 KIR2DL4Q99706 377 aa14.82□□□□□ -0.04
CLN8-213ENST00000637156 MEGF8Q7Z7M0 2845 aa14.82□□□□□ -0.04
CLN8-213ENST00000637156 K7EMI3 77 aa14.82□□□□□ -0.04
CLN8-213ENST00000637156 FCER1GP30273 86 aa14.82□□□□□ -0.04
CLN8-213ENST00000637156 TEX48A0A1B0GUV7 120 aa14.81□□□□□ -0.04
CLN8-213ENST00000637156 ATP5G1P05496 136 aa14.81□□□□□ -0.04
CLN8-213ENST00000637156 CRYBA4P53673 196 aa14.81□□□□□ -0.04
CLN8-213ENST00000637156 LINC00173Q6ZV60 143 aa14.81□□□□□ -0.04
CLN8-213ENST00000637156 COL7A1Q02388 2944 aa14.81□□□□□ -0.04
CLN8-213ENST00000637156 GAGE12JA6NER3 117 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 LEPROTL1O95214 131 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 HBDP02042 147 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 KRTDAPP60985 99 aa14.8□□□□□ -0.04
CLN8-213ENST00000637156 RPL36AP83881 106 aaKnown RBP14.8□□□□□ -0.04
CLN8-213ENST00000637156 GAGE1Q13065 139 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms