RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 VCYO14598 125 aa10.42□□□□□ -0.74
CACNA1A-228ENST00000636610 POLR2KP53803 58 aaKnown RBP10.42□□□□□ -0.74
CACNA1A-228ENST00000636610 PMVKQ15126 192 aa10.42□□□□□ -0.74
CACNA1A-228ENST00000636610 PRB1P04280 392 aa10.41□□□□□ -0.74
CACNA1A-228ENST00000636610 ZNF469Q96JG9 3925 aaPredicted RBP10.41□□□□□ -0.74
CACNA1A-228ENST00000636610 IGHV4OR15-8A0A075B7B6 117 aa10.4□□□□□ -0.74
CACNA1A-228ENST00000636610 A0A087WW49 117 aa10.4□□□□□ -0.74
CACNA1A-228ENST00000636610 CRIP2P52943 208 aaPredicted RBP10.4□□□□□ -0.74
CACNA1A-228ENST00000636610 NPC2P61916 151 aa10.4□□□□□ -0.74
CACNA1A-228ENST00000636610 SNRPD3P62318 126 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-228ENST00000636610 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.74
CACNA1A-228ENST00000636610 TSPAN13O95857 204 aa10.4□□□□□ -0.74
CACNA1A-228ENST00000636610 C11orf44Q8N8P7 122 aa10.4□□□□□ -0.74
CACNA1A-228ENST00000636610 A0A0J9YXV3 536 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 SCGB1C2P0DMR2 95 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 COX6B1P14854 86 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 TAL2Q16559 108 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 SAMD13Q5VXD3 122 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 FN1P02751 2386 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 TRAV2A0A0B4J234 112 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 A0A0J9YX75 114 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 B4DSR2 109 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 F8W1H4 67 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 PSMB8P28062 276 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 SPXQ9BT56 116 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 A0A0J9YY99 117 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 GAGE12HA6NDE8 117 aa10.39□□□□□ -0.75
CACNA1A-228ENST00000636610 A8MZ25 164 aa10.38□□□□□ -0.75
CACNA1A-228ENST00000636610 HERVK_113P61574 105 aa10.38□□□□□ -0.75
CACNA1A-228ENST00000636610 PRORYQ9H606 182 aa10.38□□□□□ -0.75
CACNA1A-228ENST00000636610 IGHV3-38A0A0C4DH36 116 aa10.38□□□□□ -0.75
CACNA1A-228ENST00000636610 M0QY20 66 aa10.38□□□□□ -0.75
CACNA1A-228ENST00000636610 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
CACNA1A-228ENST00000636610 SLURP1P55000 103 aa10.38□□□□□ -0.75
CACNA1A-228ENST00000636610 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
CACNA1A-228ENST00000636610 J3QQQ9 107 aa10.37□□□□□ -0.75
CACNA1A-228ENST00000636610 RBMY1A1P0DJD3 496 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-228ENST00000636610 RBMY1CP0DJD4 496 aa10.37□□□□□ -0.75
CACNA1A-228ENST00000636610 HOXD3P31249 432 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-228ENST00000636610 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-228ENST00000636610 A6NJY4 79 aa10.37□□□□□ -0.75
CACNA1A-228ENST00000636610 DEFB131AP59861 70 aa10.37□□□□□ -0.75
CACNA1A-228ENST00000636610 PPP1R17O96001 155 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 CFHR3Q02985 330 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 APRG1Q8IVJ8 170 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 IGHV3OR16-12A0A075B7B8 117 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 SIGMAR1Q99720 223 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 PRO0461Q9UI25 63 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 USP24Q9UPU5 2620 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 AKAP9Q99996 3911 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 H3BUA1 57 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 PRSS2P07478 247 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 TCTEX1D4Q5JR98 221 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 ATP6V0BQ99437 205 aa10.36□□□□□ -0.75
CACNA1A-228ENST00000636610 CFC1BP0CG36 223 aa10.35□□□□□ -0.75
CACNA1A-228ENST00000636610 CFC1P0CG37 223 aa10.35□□□□□ -0.75
CACNA1A-228ENST00000636610 MED14OSP0DP75 135 aa10.35□□□□□ -0.75
CACNA1A-228ENST00000636610 NFE4Q86UQ8 179 aa10.35□□□□□ -0.75
CACNA1A-228ENST00000636610 NDUFA11Q86Y39 141 aa10.35□□□□□ -0.75
CACNA1A-228ENST00000636610 SYT8Q8NBV8 401 aa10.35□□□□□ -0.75
CACNA1A-228ENST00000636610 K7EQG2 157 aa10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 NDUFS8O00217 210 aa10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 NXPH4O95158 308 aa10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 TCL1BO95988 128 aa10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 A4D1N5 150 aa10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 DLX4Q92988 240 aaPredicted RBP10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 VCX2Q9H322 139 aa10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 FLNAP21333 2647 aaKnown RBP10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 NOTCH2Q04721 2471 aa10.34□□□□□ -0.75
CACNA1A-228ENST00000636610 Q1RN00 199 aa10.33□□□□□ -0.75
CACNA1A-228ENST00000636610 Q5PR19 223 aa10.33□□□□□ -0.75
CACNA1A-228ENST00000636610 J3QR89 54 aa10.33□□□□□ -0.76
CACNA1A-228ENST00000636610 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
CACNA1A-228ENST00000636610 C9orf85Q96MD7 179 aa10.33□□□□□ -0.76
CACNA1A-228ENST00000636610 K7EMT4 169 aa10.33□□□□□ -0.76
CACNA1A-228ENST00000636610 LGALS9O00182 355 aa10.33□□□□□ -0.76
CACNA1A-228ENST00000636610 IGHV3-30P01768 117 aa10.33□□□□□ -0.76
CACNA1A-228ENST00000636610 IGHV3-30-5P0DP03 117 aa10.33□□□□□ -0.76
CACNA1A-228ENST00000636610 UBE2D1P51668 147 aa10.33□□□□□ -0.76
CACNA1A-228ENST00000636610 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-228ENST00000636610 IGKV2-29A2NJV5 120 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-228ENST00000636610 CD28P10747 220 aa10.32□□□□□ -0.76
CACNA1A-228ENST00000636610 Q6ZSN1 163 aa10.32□□□□□ -0.76
CACNA1A-228ENST00000636610 NBPF19A0A087WUL8 3843 aa10.32□□□□□ -0.76
CACNA1A-228ENST00000636610 A0A0U1RRA0 63 aa10.32□□□□□ -0.76
CACNA1A-228ENST00000636610 Q6ZSV7 163 aa10.32□□□□□ -0.76
CACNA1A-228ENST00000636610 TMEM141Q96I45 108 aa10.31□□□□□ -0.76
CACNA1A-228ENST00000636610 TIMM17AQ99595 171 aa10.31□□□□□ -0.76
CACNA1A-228ENST00000636610 ITPR3Q14573 2671 aa10.31□□□□□ -0.76
CACNA1A-228ENST00000636610 MUSTN1Q8IVN3 82 aa10.31□□□□□ -0.76
CACNA1A-228ENST00000636610 C20orf203Q8NBC4 194 aa10.31□□□□□ -0.76
CACNA1A-228ENST00000636610 A0A1W2PRX2 142 aa10.31□□□□□ -0.76
CACNA1A-228ENST00000636610 CFAP126Q5VTH2 177 aa10.31□□□□□ -0.76
CACNA1A-228ENST00000636610 DAND5Q8N907 189 aa10.31□□□□□ -0.76
CACNA1A-228ENST00000636610 IGLV4-3A0A075B6K6 122 aa10.3□□□□□ -0.76
CACNA1A-228ENST00000636610 I3L3M4 83 aa10.3□□□□□ -0.76
CACNA1A-228ENST00000636610 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms