RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 PPP1R17O96001 155 aa6.76□□□□□ -1.33
CACNA1A-223ENST00000636058 ATP5G1P05496 136 aa6.76□□□□□ -1.33
CACNA1A-223ENST00000636058 Q0VG73 95 aa6.76□□□□□ -1.33
CACNA1A-223ENST00000636058 OR10J3Q5JRS4 329 aa6.76□□□□□ -1.33
CACNA1A-223ENST00000636058 SLC25A29Q8N8R3 303 aa6.76□□□□□ -1.33
CACNA1A-223ENST00000636058 C11orf45Q8TAV5 145 aa6.76□□□□□ -1.33
CACNA1A-223ENST00000636058 C18orf32Q8TCD1 76 aa6.76□□□□□ -1.33
CACNA1A-223ENST00000636058 TRBV10-1A0A0K0K1A3 114 aa6.75□□□□□ -1.33
CACNA1A-223ENST00000636058 PRSS47A8MTI9 375 aa6.75□□□□□ -1.33
CACNA1A-223ENST00000636058 K7EQD1 137 aa6.75□□□□□ -1.33
CACNA1A-223ENST00000636058 P0DMU3 169 aa6.75□□□□□ -1.33
CACNA1A-223ENST00000636058 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
CACNA1A-223ENST00000636058 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
CACNA1A-223ENST00000636058 NDUFA6P56556 154 aa6.75□□□□□ -1.33
CACNA1A-223ENST00000636058 C20orf78Q9BR46 151 aa6.75□□□□□ -1.33
CACNA1A-223ENST00000636058 NIT2Q9NQR4 276 aa6.75□□□□□ -1.33
CACNA1A-223ENST00000636058 CRYBA4P53673 196 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 NANOS2P60321 138 aaKnown RBP6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 SUMO2P61956 95 aaKnown RBP6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 RHOHQ15669 191 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 IQCJQ1A5X6 159 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 Q6ZTC4 211 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 NEXN-AS1Q8NBZ9 246 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 DNAJC30Q96LL9 226 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 MAP1LC3AQ9H492 121 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 Q9UF83 564 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 PRO0255Q9UI72 69 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 HHLA3Q9XRX5 114 aa6.74□□□□□ -1.33
CACNA1A-223ENST00000636058 PRKDCP78527 4128 aaKnown RBP6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 IGLV2-18A0A075B6J9 118 aa6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 F5H768 121 aa6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 SMIM6P0DI80 62 aa6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 POLR2KP53803 58 aaKnown RBP6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 RPL32P62910 135 aaKnown RBP6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 COA6Q5JTJ3 125 aaKnown RBP6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 URB1-AS1Q96HZ7 61 aa6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 ST20Q9HBF5 79 aa6.73□□□□□ -1.33
CACNA1A-223ENST00000636058 TRBV7-3A0A075B6L6 115 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 LOC389332A0A1B0GUA5 103 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 SDHAF1A6NFY7 115 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 LINC01546A6NGU7 62 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 LINC00694P0DN24 101 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 HTN3P15516 51 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 IFI27P40305 119 aaPredicted RBP6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 LINC00310P59036 64 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 BAGE3Q86Y29 109 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 Q8N8P6 123 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 VSIG2Q96IQ7 327 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 C12orf57Q99622 126 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 PRADC1Q9BSG0 188 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 TMEM70Q9BUB7 260 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 NXT2Q9NPJ8 142 aaKnown RBP6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 TNFRSF18Q9Y5U5 241 aa6.72□□□□□ -1.33
CACNA1A-223ENST00000636058 TRBV27A0A0K0K1C4 114 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 LOC100131303A0A0U1RQF7 123 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 VCYO14598 125 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 PAX4O43316 350 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 SERF1AO75920 110 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 PMCHP20382 165 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 S100A2P29034 98 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 NIT1Q86X76 327 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 ZNRF2Q8NHG8 242 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 PRSS3P2Q8NHM4 247 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 COL7A1Q02388 2944 aa6.71□□□□□ -1.34
CACNA1A-223ENST00000636058 TRAV26-1A0A087WT03 109 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 DEFB131BA0A096LNP1 70 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 A0A0J9YY99 117 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 GAGE12JA6NER3 117 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 H3BNG1 76 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 NUPR1O60356 82 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 LINC00614P0C842 121 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 ESDP10768 282 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 GYPEP15421 78 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 UBE2D3P61077 147 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 UBE2D2P62837 147 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 S100A12P80511 92 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 GAGE1Q13065 139 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 GAGE4Q13068 117 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 GAGE5Q13069 117 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 GAGE13Q4V321 117 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 RNASEKQ6P5S7 137 aaKnown RBP6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 FA2HQ7L5A8 372 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 CHCHD1Q96BP2 118 aaKnown RBP6.7□□□□□ -1.34
CACNA1A-223ENST00000636058 TRAV10A0A0B4J240 114 aa6.69□□□□□ -1.34
CACNA1A-223ENST00000636058 I3L3M4 83 aa6.69□□□□□ -1.34
CACNA1A-223ENST00000636058 K7EMI3 77 aa6.69□□□□□ -1.34
CACNA1A-223ENST00000636058 DAZ4Q86SG3 579 aaKnown RBP6.69□□□□□ -1.34
CACNA1A-223ENST00000636058 KIR2DL4Q99706 377 aa6.69□□□□□ -1.34
CACNA1A-223ENST00000636058 DAZ3Q9NR90 486 aaKnown RBP6.69□□□□□ -1.34
CACNA1A-223ENST00000636058 AP5S1Q9NUS5 200 aa6.69□□□□□ -1.34
CACNA1A-223ENST00000636058 TCAPO15273 167 aa6.68□□□□□ -1.34
CACNA1A-223ENST00000636058 TSHBP01222 138 aa6.68□□□□□ -1.34
CACNA1A-223ENST00000636058 HIST3H2BBQ8N257 126 aa6.68□□□□□ -1.34
CACNA1A-223ENST00000636058 PHLDA1Q8WV24 401 aaPredicted RBP6.68□□□□□ -1.34
CACNA1A-223ENST00000636058 IGHV3-38A0A0C4DH36 116 aa6.67□□□□□ -1.34
CACNA1A-223ENST00000636058 HSBP1O75506 76 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms