RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 P01737 135 aa12.2□□□□□ -0.46
CLN6-210ENST00000635747 GCSHP23434 173 aa12.2□□□□□ -0.46
CLN6-210ENST00000635747 NIT1Q86X76 327 aa12.2□□□□□ -0.46
CLN6-210ENST00000635747 FER1L6-AS1Q8NA97 138 aa12.2□□□□□ -0.46
CLN6-210ENST00000635747 RMI2Q96E14 147 aa12.2□□□□□ -0.46
CLN6-210ENST00000635747 MUC21A0A0G2JKD1 596 aa12.19□□□□□ -0.46
CLN6-210ENST00000635747 MUC21A0A140T8X8 626 aa12.19□□□□□ -0.46
CLN6-210ENST00000635747 IGLC6P0CF74 106 aa12.19□□□□□ -0.46
CLN6-210ENST00000635747 FUSP35637 526 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLN6-210ENST00000635747 CACNG7P62955 275 aa12.19□□□□□ -0.46
CLN6-210ENST00000635747 Q8N3U1 123 aa12.19□□□□□ -0.46
CLN6-210ENST00000635747 NEXN-AS1Q8NBZ9 246 aa12.19□□□□□ -0.46
CLN6-210ENST00000635747 EIF5A2Q9GZV4 153 aaKnown RBP12.19□□□□□ -0.46
CLN6-210ENST00000635747 SSTP61278 116 aa12.18□□□□□ -0.46
CLN6-210ENST00000635747 TMEM97Q5BJF2 176 aa12.18□□□□□ -0.46
CLN6-210ENST00000635747 Q8N814 137 aa12.18□□□□□ -0.46
CLN6-210ENST00000635747 TPPP3Q9BW30 176 aa12.18□□□□□ -0.46
CLN6-210ENST00000635747 IGLV5-52A0A0A0MRZ9 124 aa12.17□□□□□ -0.46
CLN6-210ENST00000635747 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
CLN6-210ENST00000635747 PKIAP61925 76 aa12.17□□□□□ -0.46
CLN6-210ENST00000635747 KRTAP4-5Q9BYR2 181 aa12.17□□□□□ -0.46
CLN6-210ENST00000635747 KIF25-AS1Q9Y6Z4 181 aa12.17□□□□□ -0.46
CLN6-210ENST00000635747 ABCA13Q86UQ4 5058 aa12.16□□□□□ -0.46
CLN6-210ENST00000635747 TRBV20OR9-2A0A075B6H5 130 aa12.16□□□□□ -0.46
CLN6-210ENST00000635747 H7C1H1 209 aa12.16□□□□□ -0.46
CLN6-210ENST00000635747 GZMBP10144 247 aa12.16□□□□□ -0.46
CLN6-210ENST00000635747 PEA15Q15121 130 aa12.16□□□□□ -0.46
CLN6-210ENST00000635747 TMEM262E9PQX1 116 aa12.15□□□□□ -0.46
CLN6-210ENST00000635747 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
CLN6-210ENST00000635747 Q0VG73 95 aa12.15□□□□□ -0.46
CLN6-210ENST00000635747 KLK12Q9UKR0 248 aa12.15□□□□□ -0.46
CLN6-210ENST00000635747 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
CLN6-210ENST00000635747 WDR73Q6P4I2 378 aa12.14□□□□□ -0.47
CLN6-210ENST00000635747 DNAJC30Q96LL9 226 aa12.14□□□□□ -0.47
CLN6-210ENST00000635747 NUDT10Q8NFP7 164 aa12.13□□□□□ -0.47
CLN6-210ENST00000635747 NUDT11Q96G61 164 aa12.13□□□□□ -0.47
CLN6-210ENST00000635747 MGPP08493 103 aa12.12□□□□□ -0.47
CLN6-210ENST00000635747 SRP19P09132 144 aaKnown RBP12.12□□□□□ -0.47
CLN6-210ENST00000635747 XGP55808 180 aa12.12□□□□□ -0.47
CLN6-210ENST00000635747 LYZL1Q6UWQ5 148 aa12.12□□□□□ -0.47
CLN6-210ENST00000635747 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
CLN6-210ENST00000635747 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
CLN6-210ENST00000635747 M0QY20 66 aa12.11□□□□□ -0.47
CLN6-210ENST00000635747 OCC1Q8TAD7 63 aa12.11□□□□□ -0.47
CLN6-210ENST00000635747 CHCHD5Q9BSY4 110 aa12.11□□□□□ -0.47
CLN6-210ENST00000635747 TMEM70Q9BUB7 260 aa12.11□□□□□ -0.47
CLN6-210ENST00000635747 RPP21Q9H633 154 aaKnown RBP12.11□□□□□ -0.47
CLN6-210ENST00000635747 NTF3P20783 257 aa12.1□□□□□ -0.47
CLN6-210ENST00000635747 CTRLP40313 264 aa12.1□□□□□ -0.47
CLN6-210ENST00000635747 FAM74A3Q4VXF1 159 aa12.1□□□□□ -0.47
CLN6-210ENST00000635747 ATRAIDQ6UW56 229 aa12.1□□□□□ -0.47
CLN6-210ENST00000635747 UQCC3Q6UW78 93 aa12.1□□□□□ -0.47
CLN6-210ENST00000635747 Q8N976 141 aa12.1□□□□□ -0.47
CLN6-210ENST00000635747 DPH3P1Q9H4G8 78 aa12.1□□□□□ -0.47
CLN6-210ENST00000635747 TRBV25-1A0A075B6N4 114 aa12.09□□□□□ -0.47
CLN6-210ENST00000635747 LINC00862A6NCI5 91 aa12.09□□□□□ -0.47
CLN6-210ENST00000635747 EPM2AB3EWF7 344 aa12.09□□□□□ -0.47
CLN6-210ENST00000635747 CRPP02741 224 aa12.09□□□□□ -0.47
CLN6-210ENST00000635747 SUMO4Q6EEV6 95 aa12.09□□□□□ -0.47
CLN6-210ENST00000635747 K7EN84 100 aa12.08□□□□□ -0.48
CLN6-210ENST00000635747 SRSF3P84103 164 aaKnown RBP12.08□□□□□ -0.48
CLN6-210ENST00000635747 RASL11AQ6T310 242 aa12.08□□□□□ -0.48
CLN6-210ENST00000635747 BAALCQ8WXS3 180 aa12.08□□□□□ -0.48
CLN6-210ENST00000635747 C1orf43Q9BWL3 253 aa12.08□□□□□ -0.48
CLN6-210ENST00000635747 CNFNQ9BYD5 112 aa12.08□□□□□ -0.48
CLN6-210ENST00000635747 RNASE7Q9H1E1 156 aaKnown RBP12.08□□□□□ -0.48
CLN6-210ENST00000635747 C9JQL5 133 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 LECT2O14960 151 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 ANGP03950 147 aaKnown RBP12.07□□□□□ -0.48
CLN6-210ENST00000635747 WFDC2Q14508 124 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 TWIST1Q15672 202 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 IQCJQ1A5X6 159 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 MPV17L2Q567V2 206 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 C15orf54Q8N8G6 183 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 SMIM7Q9BQ49 75 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 NIT2Q9NQR4 276 aa12.07□□□□□ -0.48
CLN6-210ENST00000635747 IGHV1-24A0A0C4DH33 117 aa12.06□□□□□ -0.48
CLN6-210ENST00000635747 SMIM15Q7Z3B0 74 aa12.06□□□□□ -0.48
CLN6-210ENST00000635747 FRZBQ92765 325 aa12.06□□□□□ -0.48
CLN6-210ENST00000635747 ZNF727A8MUV8 499 aa12.05□□□□□ -0.48
CLN6-210ENST00000635747 A8MWL6 223 aa12.05□□□□□ -0.48
CLN6-210ENST00000635747 GATCO43716 136 aaKnown RBP12.05□□□□□ -0.48
CLN6-210ENST00000635747 CEBPGP53567 150 aa12.05□□□□□ -0.48
CLN6-210ENST00000635747 MIAQ16674 131 aa12.05□□□□□ -0.48
CLN6-210ENST00000635747 C14orf177Q52M58 125 aa12.05□□□□□ -0.48
CLN6-210ENST00000635747 ENHOQ6UWT2 76 aa12.05□□□□□ -0.48
CLN6-210ENST00000635747 FAM231DQ6ZW35 169 aa12.05□□□□□ -0.48
CLN6-210ENST00000635747 PGLYRP4Q96LB8 373 aa12.04□□□□□ -0.48
CLN6-210ENST00000635747 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.03□□□□□ -0.48
CLN6-210ENST00000635747 RBX1P62877 108 aa12.03□□□□□ -0.48
CLN6-210ENST00000635747 COMMD7Q86VX2 200 aa12.03□□□□□ -0.48
CLN6-210ENST00000635747 FAM229AH3BQW9 127 aa12.02□□□□□ -0.49
CLN6-210ENST00000635747 GAGE6Q13070 117 aa12.02□□□□□ -0.49
CLN6-210ENST00000635747 TMEM241Q24JQ0 296 aa12.02□□□□□ -0.49
CLN6-210ENST00000635747 CT83Q5H943 113 aa12.02□□□□□ -0.49
CLN6-210ENST00000635747 PRR34Q9NV39 138 aa12.02□□□□□ -0.49
CLN6-210ENST00000635747 FAT1Q14517 4588 aa12.02□□□□□ -0.49
CLN6-210ENST00000635747 LINC01551Q86U37 167 aa12.01□□□□□ -0.49
CLN6-210ENST00000635747 GTSF1Q8WW33 167 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms