RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MIFP14174 115 aa10.4□□□□□ -0.74
LINC00339-208ENST00000634934 EMP1P54849 157 aa10.4□□□□□ -0.74
LINC00339-208ENST00000634934 NXT2Q9NPJ8 142 aaKnown RBP10.4□□□□□ -0.74
LINC00339-208ENST00000634934 hDV102S1A0JD36 115 aa10.39□□□□□ -0.75
LINC00339-208ENST00000634934 NHLRC4P0CG21 123 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-208ENST00000634934 S100A4P26447 101 aaKnown RBP10.39□□□□□ -0.75
LINC00339-208ENST00000634934 IFI27P40305 119 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-208ENST00000634934 TMEM263Q8WUH6 116 aaKnown RBP10.39□□□□□ -0.75
LINC00339-208ENST00000634934 C16orf74Q96GX8 76 aa10.39□□□□□ -0.75
LINC00339-208ENST00000634934 MDFICQ9P1T7 246 aa10.39□□□□□ -0.75
LINC00339-208ENST00000634934 TIMM8BQ9Y5J9 83 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-208ENST00000634934 FGF6P10767 208 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 ASIPP42127 132 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 AMN1Q8IY45 258 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 BOD1L2Q8IYS8 172 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 Q8NAQ8 132 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 RNASE8Q8TDE3 154 aaKnown RBP10.38□□□□□ -0.75
LINC00339-208ENST00000634934 CBY1Q9Y3M2 126 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 IGHV3-16A0A0C4DH30 117 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 CKS2P33552 79 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 PTTG1IPP53801 180 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 ZNF415Q09FC8 603 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 MPV17L2Q567V2 206 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 RNF185Q96GF1 192 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 MAP1LC3AQ9H492 121 aa10.38□□□□□ -0.75
LINC00339-208ENST00000634934 TAX1BP3O14907 124 aa10.37□□□□□ -0.75
LINC00339-208ENST00000634934 CCL25O15444 150 aa10.37□□□□□ -0.75
LINC00339-208ENST00000634934 NUDT3O95989 172 aa10.37□□□□□ -0.75
LINC00339-208ENST00000634934 C2orf91Q6ZV80 131 aa10.37□□□□□ -0.75
LINC00339-208ENST00000634934 C11orf72Q8NBR9 251 aa10.37□□□□□ -0.75
LINC00339-208ENST00000634934 H3BVH4 76 aa10.36□□□□□ -0.75
LINC00339-208ENST00000634934 SNAI2O43623 268 aa10.36□□□□□ -0.75
LINC00339-208ENST00000634934 FCER1GP30273 86 aa10.36□□□□□ -0.75
LINC00339-208ENST00000634934 CACNG7P62955 275 aa10.36□□□□□ -0.75
LINC00339-208ENST00000634934 TWIST1Q15672 202 aa10.36□□□□□ -0.75
LINC00339-208ENST00000634934 IFI27L1Q96BM0 104 aa10.36□□□□□ -0.75
LINC00339-208ENST00000634934 TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
LINC00339-208ENST00000634934 K7EMI3 77 aa10.35□□□□□ -0.75
LINC00339-208ENST00000634934 NPYP01303 97 aa10.35□□□□□ -0.75
LINC00339-208ENST00000634934 NOP10Q9NPE3 64 aaKnown RBP10.35□□□□□ -0.75
LINC00339-208ENST00000634934 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
LINC00339-208ENST00000634934 A0A0J9YWU9 116 aa10.34□□□□□ -0.75
LINC00339-208ENST00000634934 PLAC8L1A1L4L8 177 aa10.34□□□□□ -0.75
LINC00339-208ENST00000634934 MED14OSP0DP75 135 aa10.34□□□□□ -0.75
LINC00339-208ENST00000634934 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
LINC00339-208ENST00000634934 Q8N8P6 123 aa10.34□□□□□ -0.75
LINC00339-208ENST00000634934 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
LINC00339-208ENST00000634934 HSD52Q0P140 79 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 C9orf85Q96MD7 179 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 C11orf68Q9H3H3 251 aaKnown RBP10.33□□□□□ -0.76
LINC00339-208ENST00000634934 IGLV2-18A0A075B6J9 118 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 MUC21A0A0G2JKD1 596 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 MUC21A0A140T8X8 626 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 ATP5LO75964 103 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 NCR2O95944 276 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 DAZ2Q13117 558 aaKnown RBP10.33□□□□□ -0.76
LINC00339-208ENST00000634934 TMEM97Q5BJF2 176 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 SPXQ9BT56 116 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 PHLDA3Q9Y5J5 127 aa10.33□□□□□ -0.76
LINC00339-208ENST00000634934 TRGV1A0A0A0MS02 117 aa10.32□□□□□ -0.76
LINC00339-208ENST00000634934 A6NDN8 102 aa10.32□□□□□ -0.76
LINC00339-208ENST00000634934 TNFRSF6BO95407 300 aa10.32□□□□□ -0.76
LINC00339-208ENST00000634934 SMIM15Q7Z3B0 74 aa10.32□□□□□ -0.76
LINC00339-208ENST00000634934 IL17DQ8TAD2 202 aa10.32□□□□□ -0.76
LINC00339-208ENST00000634934 MRAP2Q96G30 205 aa10.32□□□□□ -0.76
LINC00339-208ENST00000634934 MRPL16Q9NX20 251 aaKnown RBP10.32□□□□□ -0.76
LINC00339-208ENST00000634934 M0R2P5 195 aa10.31□□□□□ -0.76
LINC00339-208ENST00000634934 SPART-AS1P0CW21 52 aa10.31□□□□□ -0.76
LINC00339-208ENST00000634934 DEFB130BP0DP73 79 aa10.31□□□□□ -0.76
LINC00339-208ENST00000634934 DEFB130AP0DP74 79 aa10.31□□□□□ -0.76
LINC00339-208ENST00000634934 EVI2AP22794 236 aa10.31□□□□□ -0.76
LINC00339-208ENST00000634934 ANKRD39Q53RE8 183 aa10.31□□□□□ -0.76
LINC00339-208ENST00000634934 DKK2Q9UBU2 259 aa10.31□□□□□ -0.76
LINC00339-208ENST00000634934 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
LINC00339-208ENST00000634934 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 LYRM9A8MSI8 78 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 H3BRM9 83 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 M0R381 172 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 GAGE7O76087 117 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 ZNF876PQ49A33 203 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 Q6ZTI0 123 aa10.3□□□□□ -0.76
LINC00339-208ENST00000634934 LOC389332A0A1B0GUA5 103 aa10.29□□□□□ -0.76
LINC00339-208ENST00000634934 ODF1Q14990 250 aa10.29□□□□□ -0.76
LINC00339-208ENST00000634934 SPANXN1Q5VSR9 72 aa10.29□□□□□ -0.76
LINC00339-208ENST00000634934 SYT8Q8NBV8 401 aa10.29□□□□□ -0.76
LINC00339-208ENST00000634934 VAMP3Q15836 100 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 NRACQ8N912 160 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 TRGV2A0A075B6R0 118 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 TEX48A0A1B0GUV7 120 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 LINC01549A6NIU2 74 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 DAD1P61803 113 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 RASL10AQ92737 203 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 HHLA3Q9XRX5 114 aa10.28□□□□□ -0.76
LINC00339-208ENST00000634934 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms