RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 TP53TG3Q9ULZ0 132 aa4.01□□□□□ -1.77
LINC00254-202ENST00000633813 TENM1Q9UKZ4 2725 aa4.01□□□□□ -1.77
LINC00254-202ENST00000633813 IGHV3-16A0A0C4DH30 117 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 C1orf196B1AJZ1 125 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 H3BVH4 76 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 HLA-DQA1P01909 254 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 TRGC2P03986 189 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 RBMY1A1P0DJD3 496 aaKnown RBP4□□□□□ -1.77
LINC00254-202ENST00000633813 RBMY1CP0DJD4 496 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 RNASE3P12724 160 aaKnown RBP4□□□□□ -1.77
LINC00254-202ENST00000633813 APOC4P55056 127 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 CACNG7P62955 275 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 RBMY1FQ15415 496 aaKnown RBP4□□□□□ -1.77
LINC00254-202ENST00000633813 KRTAP21-3Q3LHN1 58 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 SPANXN1Q5VSR9 72 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 PET117Q6UWS5 81 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 ZNF493Q6ZR52 646 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 TMEM136Q6ZRR5 245 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 GATD1Q8NB37 220 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 CSNK1G2-AS1Q8NCQ2 148 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 TMEM208Q9BTX3 173 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 GOLT1BQ9Y3E0 138 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 PHLDA3Q9Y5J5 127 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 TRAPPC1Q9Y5R8 145 aa4□□□□□ -1.77
LINC00254-202ENST00000633813 G3V4G9 280 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 PHOX2AO14813 284 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 APCSP02743 223 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 HTN1P15515 57 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 RAB4BP61018 213 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 RAB5BP61020 215 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 FABP9Q0Z7S8 132 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 ZNF705AQ6ZN79 300 aaPredicted RBP3.99□□□□□ -1.77
LINC00254-202ENST00000633813 SMIM15Q7Z3B0 74 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 Q8NBF4 154 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 OR10AG1Q8NH19 301 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 FRZBQ92765 325 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 PTH2Q96A98 100 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 C9orf85Q96MD7 179 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 SPXQ9BT56 116 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 TMEM191AQ9H0A3 160 aa3.99□□□□□ -1.77
LINC00254-202ENST00000633813 TRRAPQ9Y4A5 3859 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 AGRNO00468 2067 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 IGHV3OR16-12A0A075B7B8 117 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 MUC21A0A0G2JKD1 596 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 MUC21A0A140T8X8 626 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 SMIM9A6NGZ8 99 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 M0R381 172 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 NXPH4O95158 308 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 TRGC1P0CF51 173 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 GATA1P15976 413 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-202ENST00000633813 DSCR10P59022 87 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 SSTP61278 116 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 RRN3P1Q2M238 152 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 FAM104BQ5XKR9 115 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 ZFP82Q8N141 532 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 C11orf72Q8NBR9 251 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 TMEM263Q8WUH6 116 aaKnown RBP3.98□□□□□ -1.77
LINC00254-202ENST00000633813 NDUFAF3Q9BU61 184 aa3.98□□□□□ -1.77
LINC00254-202ENST00000633813 TIMM8BQ9Y5J9 83 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-202ENST00000633813 M0R2P5 195 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST1H2BKO60814 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 PRM2P04554 102 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST1H2BJP06899 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 AZU1P20160 251 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 RAB4AP20338 218 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 EVI2AP22794 236 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST1H2BOP23527 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST1H2BBP33778 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST1H2BDP58876 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST1H2BCP62807 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 DAZ2Q13117 558 aaKnown RBP3.97□□□□□ -1.77
LINC00254-202ENST00000633813 SLAQ13239 276 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST2H2BEQ16778 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.97□□□□□ -1.77
LINC00254-202ENST00000633813 KPRPQ5T749 579 aaPredicted RBP3.97□□□□□ -1.77
LINC00254-202ENST00000633813 RNASE8Q8TDE3 154 aaKnown RBP3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST1H2BHQ93079 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 C16orf74Q96GX8 76 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 AP1S3Q96PC3 154 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 RCHY1Q96PM5 261 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST1H2BNQ99877 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 HIST1H2BMQ99879 126 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 COL6A5A8TX70 2615 aa3.97□□□□□ -1.77
LINC00254-202ENST00000633813 VWFP04275 2813 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 PPBPP02775 128 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 SMIM17P0DL12 118 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 SRSF9Q13242 221 aaKnown RBP eCLIP3.96□□□□□ -1.78
LINC00254-202ENST00000633813 LGALS9BQ3B8N2 356 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 LBHQ53QV2 105 aaPredicted RBP3.96□□□□□ -1.78
LINC00254-202ENST00000633813 AMN1Q8IY45 258 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 RASL10AQ92737 203 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 RNF185Q96GF1 192 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 C2orf48Q96LS8 159 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 OVOL2Q9BRP0 275 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 ALKBH7Q9BT30 221 aaPredicted RBP3.96□□□□□ -1.78
LINC00254-202ENST00000633813 DPH3P1Q9H4G8 78 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 TP53TG1Q9Y2A0 90 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 KIF25-AS1Q9Y6Z4 181 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 U3KQK5 164 aa3.96□□□□□ -1.78
LINC00254-202ENST00000633813 STAB1Q9NY15 2570 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms