RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 SEC11CQ9BY50 192 aa6.98□□□□□ -1.29
SOX2-OT-257ENST00000630553 VPS13BQ7Z7G8 4022 aa6.98□□□□□ -1.29
SOX2-OT-257ENST00000630553 HIGD1CA8MV81 97 aa6.97□□□□□ -1.29
SOX2-OT-257ENST00000630553 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
SOX2-OT-257ENST00000630553 SMR3BP02814 79 aaPredicted RBP6.97□□□□□ -1.29
SOX2-OT-257ENST00000630553 TRGC1P0CF51 173 aa6.97□□□□□ -1.29
SOX2-OT-257ENST00000630553 RAB4BP61018 213 aa6.97□□□□□ -1.29
SOX2-OT-257ENST00000630553 Q6ZSN1 163 aa6.97□□□□□ -1.29
SOX2-OT-257ENST00000630553 PRADC1Q9BSG0 188 aa6.97□□□□□ -1.29
SOX2-OT-257ENST00000630553 MRPS16Q9Y3D3 137 aaKnown RBP6.97□□□□□ -1.29
SOX2-OT-257ENST00000630553 A0A087WWL8 130 aa6.96□□□□□ -1.3
SOX2-OT-257ENST00000630553 PPP1R2P9O14990 202 aa6.96□□□□□ -1.3
SOX2-OT-257ENST00000630553 GYPEP15421 78 aa6.96□□□□□ -1.3
SOX2-OT-257ENST00000630553 NTF3P20783 257 aa6.96□□□□□ -1.3
SOX2-OT-257ENST00000630553 XGP55808 180 aa6.96□□□□□ -1.3
SOX2-OT-257ENST00000630553 MSRB1Q9NZV6 116 aa6.96□□□□□ -1.3
SOX2-OT-257ENST00000630553 CARHSP1Q9Y2V2 147 aaKnown RBP6.96□□□□□ -1.3
SOX2-OT-257ENST00000630553 LINC00588Q9Y4M8 146 aa6.96□□□□□ -1.3
SOX2-OT-257ENST00000630553 FAT1Q14517 4588 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 IGHV3-73A0A0B4J1V6 119 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 MUC21A0A0G2JKD1 596 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 LOC100131303A0A0U1RQF7 123 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 MUC21A0A140T8X8 626 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 A0A1B0GUT8 65 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 EREGO14944 169 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 BTF3P20290 206 aaKnown RBP6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 SRIP30626 198 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 ESRGQ1W209 222 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 TTC32Q5I0X7 151 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 FAM74A4Q5TZK3 123 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 NEGR1Q7Z3B1 354 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 C14orf178Q8N769 122 aaPredicted RBP6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 NUP35Q8NFH5 326 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 ANAPC16Q96DE5 110 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 TPPP3Q9BW30 176 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 DPH3P1Q9H4G8 78 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 Q9H8V8 135 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 NAT8BQ9UHF3 227 aa6.95□□□□□ -1.3
SOX2-OT-257ENST00000630553 EVI2AP22794 236 aa6.94□□□□□ -1.3
SOX2-OT-257ENST00000630553 FUSP35637 526 aaKnown RBP eCLIP6.94□□□□□ -1.3
SOX2-OT-257ENST00000630553 GATD1Q8NB37 220 aa6.94□□□□□ -1.3
SOX2-OT-257ENST00000630553 A0A1B0GW15 77 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 A0A1B0GXF2 115 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 F8W036 122 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 M0QY20 66 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 SMIM17P0DL12 118 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 UBE2D3P61077 147 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 UBE2D2P62837 147 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 TWIST1Q15672 202 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 ZNF56Q15929 161 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 LYPD5Q6UWN5 251 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 PGLYRP4Q96LB8 373 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 TMEM191AQ9H0A3 160 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 Q9UF83 564 aa6.93□□□□□ -1.3
SOX2-OT-257ENST00000630553 TRBV7-3A0A075B6L6 115 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 LOC100996750A0A140TA64 210 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 H7C1H1 209 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 MT-ND4LP03901 98 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 SUMO4Q6EEV6 95 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 ATP5L2Q7Z4Y8 100 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 NEXN-AS1Q8NBZ9 246 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 BORCS7Q96B45 105 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 IMMP2LQ96T52 175 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 KRTAP4-6Q9BYQ5 205 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 GTSF1LQ9H1H1 148 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 TMEM242Q9NWH2 141 aa6.92□□□□□ -1.3
SOX2-OT-257ENST00000630553 A0A087WWC5 75 aa6.91□□□□□ -1.3
SOX2-OT-257ENST00000630553 K7EP13 123 aa6.91□□□□□ -1.3
SOX2-OT-257ENST00000630553 RPL36AP83881 106 aaKnown RBP6.91□□□□□ -1.3
SOX2-OT-257ENST00000630553 RIGQ13278 110 aa6.91□□□□□ -1.3
SOX2-OT-257ENST00000630553 RHEBQ15382 184 aa6.91□□□□□ -1.3
SOX2-OT-257ENST00000630553 ATP6V0E2Q8NHE4 81 aa6.91□□□□□ -1.3
SOX2-OT-257ENST00000630553 RPL36ALQ969Q0 106 aaKnown RBP6.91□□□□□ -1.3
SOX2-OT-257ENST00000630553 DNAJC30Q96LL9 226 aa6.91□□□□□ -1.3
SOX2-OT-257ENST00000630553 CTDSP1Q9GZU7 261 aa6.91□□□□□ -1.3
SOX2-OT-257ENST00000630553 LELP1Q5T871 98 aa6.9□□□□□ -1.3
SOX2-OT-257ENST00000630553 CDPF1Q6NVV7 123 aa6.9□□□□□ -1.3
SOX2-OT-257ENST00000630553 RASL11AQ6T310 242 aa6.9□□□□□ -1.3
SOX2-OT-257ENST00000630553 SMIM15Q7Z3B0 74 aa6.9□□□□□ -1.3
SOX2-OT-257ENST00000630553 KRTAP1-5Q9BYS1 174 aa6.9□□□□□ -1.3
SOX2-OT-257ENST00000630553 TRAV9-1A0A075B6T8 112 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 TRBV6-5A0A0K0K1A5 114 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 GAGE12JA6NER3 117 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 S100A8P05109 93 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 MGPP08493 103 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 DNAH10OSP0CZ25 163 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 HBBP68871 147 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 GAGE1Q13065 139 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 GAGE4Q13068 117 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 GAGE5Q13069 117 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 GAGE13Q4V321 117 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 RNF185Q96GF1 192 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 NIT2Q9NQR4 276 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
SOX2-OT-257ENST00000630553 F5H697 171 aa6.88□□□□□ -1.31
SOX2-OT-257ENST00000630553 SIVA1O15304 175 aa6.88□□□□□ -1.31
SOX2-OT-257ENST00000630553 RAB4AP20338 218 aa6.88□□□□□ -1.31
SOX2-OT-257ENST00000630553 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
SOX2-OT-257ENST00000630553 SSTP61278 116 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms