RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
SYNGAP1-207ENST00000628646 LINC01546A6NGU7 62 aa9.2□□□□□ -0.94
SYNGAP1-207ENST00000628646 TNFRSF18Q9Y5U5 241 aa9.2□□□□□ -0.94
SYNGAP1-207ENST00000628646 MSRB1Q9NZV6 116 aa9.2□□□□□ -0.94
SYNGAP1-207ENST00000628646 IGKCP01834 107 aa9.19□□□□□ -0.94
SYNGAP1-207ENST00000628646 Q6ZQT7 251 aa9.19□□□□□ -0.94
SYNGAP1-207ENST00000628646 IGKV3D-20A0A0C4DH25 116 aa9.19□□□□□ -0.94
SYNGAP1-207ENST00000628646 SMIM2Q9BVW6 85 aa9.19□□□□□ -0.94
SYNGAP1-207ENST00000628646 TRGV4A0A0C4DH28 118 aa9.19□□□□□ -0.94
SYNGAP1-207ENST00000628646 hDV102S1A0JD36 115 aa9.19□□□□□ -0.94
SYNGAP1-207ENST00000628646 DAD1P61803 113 aa9.19□□□□□ -0.94
SYNGAP1-207ENST00000628646 GAGE12BA1L429 117 aa9.18□□□□□ -0.94
SYNGAP1-207ENST00000628646 GAGE7O76087 117 aa9.18□□□□□ -0.94
SYNGAP1-207ENST00000628646 GAGE12FP0CL80 117 aa9.18□□□□□ -0.94
SYNGAP1-207ENST00000628646 GAGE12GP0CL81 117 aa9.18□□□□□ -0.94
SYNGAP1-207ENST00000628646 GAGE12IP0CL82 117 aa9.18□□□□□ -0.94
SYNGAP1-207ENST00000628646 IGHV3-73A0A0B4J1V6 119 aa9.18□□□□□ -0.94
SYNGAP1-207ENST00000628646 ANKRD39Q53RE8 183 aa9.18□□□□□ -0.94
SYNGAP1-207ENST00000628646 SCRT2Q9NQ03 307 aa9.18□□□□□ -0.94
SYNGAP1-207ENST00000628646 GAGE1Q13065 139 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 SOCS3O14543 225 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 SNAI2O43623 268 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 ZNF876PQ49A33 203 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 NOP10Q9NPE3 64 aaKnown RBP9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 GNRH2O43555 120 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 PLNP26678 52 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 KIR3DS1Q14943 382 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 SCGB1D4Q6XE38 83 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 OR4C5Q8NGB2 326 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 DLEU1O43261 78 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 SPRY2O43597 315 aa9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 TRPT1Q86TN4 253 aaKnown RBP9.17□□□□□ -0.94
SYNGAP1-207ENST00000628646 NPSP0C0P6 89 aa9.16□□□□□ -0.94
SYNGAP1-207ENST00000628646 ZFAND2AQ8N6M9 145 aa9.16□□□□□ -0.94
SYNGAP1-207ENST00000628646 PRR9Q5T870 116 aa9.16□□□□□ -0.94
SYNGAP1-207ENST00000628646 RHODO00212 210 aa9.16□□□□□ -0.94
SYNGAP1-207ENST00000628646 CHTOPQ9Y3Y2 248 aaKnown RBP9.16□□□□□ -0.94
SYNGAP1-207ENST00000628646 A8MWV9 139 aa9.15□□□□□ -0.94
SYNGAP1-207ENST00000628646 F5H768 121 aa9.15□□□□□ -0.94
SYNGAP1-207ENST00000628646 ERASQ7Z444 233 aa9.15□□□□□ -0.94
SYNGAP1-207ENST00000628646 SPATA25Q9BR10 227 aa9.15□□□□□ -0.94
SYNGAP1-207ENST00000628646 GTF2H5Q6ZYL4 71 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 SPXQ9BT56 116 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 MRPL16Q9NX20 251 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 IGHV4-4A0A075B6R2 117 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 SEC11AP67812 179 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 CUBNO60494 3623 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 IGLV2-18A0A075B6J9 118 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 BEAN1Q3B7T3 259 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 FGF6P10767 208 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 AZU1P20160 251 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 Q6ZVH6 145 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
SYNGAP1-207ENST00000628646 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 A6NJY4 79 aa9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 HSD52Q0P140 79 aa9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 A0A087WWL8 130 aa9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 SRSF9Q13242 221 aaKnown RBP eCLIP9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 C2orf91Q6ZV80 131 aa9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 COX8AP10176 69 aa9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 C2orf66Q6UXQ4 117 aa9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 Q8N1Y9 231 aa9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 RETNQ9HD89 108 aa9.13□□□□□ -0.95
SYNGAP1-207ENST00000628646 TRAV26-2A0A0B4J265 109 aa9.12□□□□□ -0.95
SYNGAP1-207ENST00000628646 TCTAP57738 103 aa9.12□□□□□ -0.95
SYNGAP1-207ENST00000628646 TRAV8-6A0A0B4J262 113 aa9.12□□□□□ -0.95
SYNGAP1-207ENST00000628646 IGHV3-16A0A0C4DH30 117 aa9.12□□□□□ -0.95
SYNGAP1-207ENST00000628646 TMEM141Q96I45 108 aa9.12□□□□□ -0.95
SYNGAP1-207ENST00000628646 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
SYNGAP1-207ENST00000628646 VCX2Q9H322 139 aa9.12□□□□□ -0.95
SYNGAP1-207ENST00000628646 GATA1P15976 413 aaPredicted RBP9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 GCSHP23434 173 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 ZC2HC1BQ5TFG8 222 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 C16orf74Q96GX8 76 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 SDHAF1A6NFY7 115 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 PRM2P04554 102 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 LYRM7Q5U5X0 104 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 NRACQ8N912 160 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 ORAOV1Q8WV07 137 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 HIST1H4GQ99525 98 aa9.11□□□□□ -0.95
SYNGAP1-207ENST00000628646 TMEM170BQ5T4T1 132 aa9.1□□□□□ -0.95
SYNGAP1-207ENST00000628646 CLUHP3Q96NS8 147 aa9.1□□□□□ -0.95
SYNGAP1-207ENST00000628646 KLLNB2CW77 178 aa9.1□□□□□ -0.95
SYNGAP1-207ENST00000628646 M0R2P5 195 aa9.1□□□□□ -0.95
SYNGAP1-207ENST00000628646 LGALS3P17931 250 aaKnown RBP9.1□□□□□ -0.95
SYNGAP1-207ENST00000628646 F8VRH5 84 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 SIVA1O15304 175 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 SMIM13P0DJ93 91 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 MPV17L2Q567V2 206 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 A0A087WX48 190 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 I3L3M4 83 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 RHOHQ15669 191 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 BVES-AS1Q5T3Y7 98 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 CFAP161Q6P656 301 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 MDFICQ9P1T7 246 aa9.09□□□□□ -0.95
SYNGAP1-207ENST00000628646 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
SYNGAP1-207ENST00000628646 TMEM263Q8WUH6 116 aaKnown RBP9.08□□□□□ -0.96
SYNGAP1-207ENST00000628646 COX11Q9Y6N1 276 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms