RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 FAM222AQ5U5X8 452 aa7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 SUMO4Q6EEV6 95 aa7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 RNASEKQ6P5S7 137 aaKnown RBP7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 SH2D6Q7Z4S9 175 aa7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 Q8N3U1 123 aa7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 LINC00612Q8N6U2 182 aa7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 Q8NAQ8 132 aa7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 PACRGQ96M98 296 aaPredicted RBP7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 DKK2Q9UBU2 259 aa7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 MUC4Q99102 2169 aa7.27□□□□□ -1.25
FOXCUT-201ENST00000628509 C5orf52A6NGY3 159 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 K7EQD1 137 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 M0QY20 66 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 NPYP01303 97 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 ESDP10768 282 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 HOXA5P20719 270 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 FCER1GP30273 86 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 Q8N8P6 123 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 B9D2Q9BPU9 175 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 TM2D3Q9BRN9 247 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 SMIM2Q9BVW6 85 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 PRO0255Q9UI72 69 aa7.26□□□□□ -1.25
FOXCUT-201ENST00000628509 NCR2O95944 276 aa7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 PRM2P04554 102 aa7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 LINC00315P59091 139 aa7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 SNRPEP62304 92 aaKnown RBP7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 UFSP1Q6NVU6 142 aa7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 DAZ4Q86SG3 579 aaKnown RBP7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 NIT1Q86X76 327 aa7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 JPT2Q9H910 190 aa7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 DAZ3Q9NR90 486 aaKnown RBP7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 HSPB8Q9UJY1 196 aa7.25□□□□□ -1.25
FOXCUT-201ENST00000628509 TRBV7-3A0A075B6L6 115 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 TRAV26-2A0A0B4J265 109 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 LOC389332A0A1B0GUA5 103 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 SDHAF1A6NFY7 115 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 I3L3M4 83 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 SERF1AO75920 110 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 GATA1P15976 413 aaPredicted RBP7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 AMTP48728 403 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 LAGE3Q14657 143 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 SBSPONQ8IVN8 264 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 NRACQ8N912 160 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 HHLA3Q9XRX5 114 aa7.24□□□□□ -1.25
FOXCUT-201ENST00000628509 IGHV3-73A0A0B4J1V6 119 aa7.23□□□□□ -1.25
FOXCUT-201ENST00000628509 TRBV27A0A0K0K1C4 114 aa7.23□□□□□ -1.25
FOXCUT-201ENST00000628509 SMKR1H3BMG3 65 aa7.23□□□□□ -1.25
FOXCUT-201ENST00000628509 IFI27P40305 119 aaPredicted RBP7.23□□□□□ -1.25
FOXCUT-201ENST00000628509 C11orf45Q8TAV5 145 aa7.23□□□□□ -1.25
FOXCUT-201ENST00000628509 ZNF479Q96JC4 524 aa7.23□□□□□ -1.25
FOXCUT-201ENST00000628509 KRTAP4-8Q9BYQ9 185 aa7.23□□□□□ -1.25
FOXCUT-201ENST00000628509 H3BNG1 76 aa7.22□□□□□ -1.25
FOXCUT-201ENST00000628509 PAX4O43316 350 aa7.22□□□□□ -1.25
FOXCUT-201ENST00000628509 NUDT3O95989 172 aa7.22□□□□□ -1.25
FOXCUT-201ENST00000628509 HBDP02042 147 aa7.22□□□□□ -1.25
FOXCUT-201ENST00000628509 COTL1Q14019 142 aa7.22□□□□□ -1.25
FOXCUT-201ENST00000628509 IQCJQ1A5X6 159 aa7.22□□□□□ -1.25
FOXCUT-201ENST00000628509 PAPPA-AS1Q5QFB9 102 aa7.22□□□□□ -1.25
FOXCUT-201ENST00000628509 TMEM70Q9BUB7 260 aa7.22□□□□□ -1.25
FOXCUT-201ENST00000628509 C20orf202A1L168 122 aa7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 LINC01546A6NGU7 62 aa7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 F5H768 121 aa7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 ATP5LO75964 103 aa7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 LEPROTL1O95214 131 aa7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 PRB2P02812 416 aaPredicted RBP7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 POLR2KP53803 58 aaKnown RBP7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 PKIAP61925 76 aa7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 HIST3H2BBQ8N257 126 aa7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 SLC25A29Q8N8R3 303 aa7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 ZNRF2Q8NHG8 242 aa7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 RPL39LQ96EH5 51 aaKnown RBP7.21□□□□□ -1.26
FOXCUT-201ENST00000628509 TRAV26-1A0A087WT03 109 aa7.2□□□□□ -1.26
FOXCUT-201ENST00000628509 A0A0J9YWU9 116 aa7.2□□□□□ -1.26
FOXCUT-201ENST00000628509 DEFB4AO15263 64 aa7.2□□□□□ -1.26
FOXCUT-201ENST00000628509 FHL2Q14192 279 aa7.2□□□□□ -1.26
FOXCUT-201ENST00000628509 MRPL23Q16540 153 aaKnown RBP7.2□□□□□ -1.26
FOXCUT-201ENST00000628509 NEXN-AS1Q8NBZ9 246 aa7.2□□□□□ -1.26
FOXCUT-201ENST00000628509 MAP1LC3CQ9BXW4 147 aa7.2□□□□□ -1.26
FOXCUT-201ENST00000628509 CYSLTR1Q9Y271 337 aa7.2□□□□□ -1.26
FOXCUT-201ENST00000628509 TRAV10A0A0B4J240 114 aa7.19□□□□□ -1.26
FOXCUT-201ENST00000628509 NPSP0C0P6 89 aa7.19□□□□□ -1.26
FOXCUT-201ENST00000628509 FABP4P15090 132 aa7.19□□□□□ -1.26
FOXCUT-201ENST00000628509 BTF3P20290 206 aaKnown RBP7.19□□□□□ -1.26
FOXCUT-201ENST00000628509 CRYBA4P53673 196 aa7.19□□□□□ -1.26
FOXCUT-201ENST00000628509 PDZD11Q5EBL8 140 aa7.19□□□□□ -1.26
FOXCUT-201ENST00000628509 GTSF1LQ9H1H1 148 aa7.19□□□□□ -1.26
FOXCUT-201ENST00000628509 RETNQ9HD89 108 aa7.19□□□□□ -1.26
FOXCUT-201ENST00000628509 ICOSQ9Y6W8 199 aa7.19□□□□□ -1.26
FOXCUT-201ENST00000628509 TRBV25-1A0A075B6N4 114 aa7.18□□□□□ -1.26
FOXCUT-201ENST00000628509 H7C423 109 aa7.18□□□□□ -1.26
FOXCUT-201ENST00000628509 UBE2L6O14933 153 aa7.18□□□□□ -1.26
FOXCUT-201ENST00000628509 HTN3P15516 51 aa7.18□□□□□ -1.26
FOXCUT-201ENST00000628509 DEFA6Q01524 100 aa7.18□□□□□ -1.26
FOXCUT-201ENST00000628509 ATP6V0E2Q8NHE4 81 aa7.18□□□□□ -1.26
FOXCUT-201ENST00000628509 HIST1H2BLQ99880 126 aa7.18□□□□□ -1.26
FOXCUT-201ENST00000628509 VWFP04275 2813 aa7.17□□□□□ -1.26
FOXCUT-201ENST00000628509 IGLV2-18A0A075B6J9 118 aa7.17□□□□□ -1.26
FOXCUT-201ENST00000628509 IGHV1-24A0A0C4DH33 117 aa7.17□□□□□ -1.26
FOXCUT-201ENST00000628509 GAGE12JA6NER3 117 aa7.17□□□□□ -1.26
FOXCUT-201ENST00000628509 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms