RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 CHCHD1Q96BP2 118 aaKnown RBP7.12□□□□□ -1.27
SOX2-OT-244ENST00000627738 RPL39LQ96EH5 51 aaKnown RBP7.12□□□□□ -1.27
SOX2-OT-244ENST00000627738 HIST1H2BLQ99880 126 aa7.12□□□□□ -1.27
SOX2-OT-244ENST00000627738 OVOL2Q9BRP0 275 aa7.12□□□□□ -1.27
SOX2-OT-244ENST00000627738 MAP1LC3AQ9H492 121 aa7.12□□□□□ -1.27
SOX2-OT-244ENST00000627738 COL6A5A8TX70 2615 aa7.12□□□□□ -1.27
SOX2-OT-244ENST00000627738 HSBP1O75506 76 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 PMCHP20382 165 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 EMP1P54849 157 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 RNF151Q2KHN1 245 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 LGALS9BQ3B8N2 356 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 UFSP1Q6NVU6 142 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 FA2HQ7L5A8 372 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 FAM19A2Q8N3H0 131 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 OR11H2Q8NH07 326 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 TMEM18Q96B42 140 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 NDUFAF3Q9BU61 184 aa7.11□□□□□ -1.27
SOX2-OT-244ENST00000627738 AMTP48728 403 aa7.1□□□□□ -1.27
SOX2-OT-244ENST00000627738 Q6ZWC4 215 aa7.1□□□□□ -1.27
SOX2-OT-244ENST00000627738 OR4C5Q8NGB2 326 aa7.1□□□□□ -1.27
SOX2-OT-244ENST00000627738 OR10D4PQ8NGN7 298 aa7.1□□□□□ -1.27
SOX2-OT-244ENST00000627738 RNF183Q96D59 192 aa7.1□□□□□ -1.27
SOX2-OT-244ENST00000627738 PACRGQ96M98 296 aaPredicted RBP7.1□□□□□ -1.27
SOX2-OT-244ENST00000627738 GAGE12BA1L429 117 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 PRSS47A8MTI9 375 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 M0QY20 66 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 RHODO00212 210 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 GAGE7O76087 117 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 PPP1R17O96001 155 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 PRB2P02812 416 aaPredicted RBP7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 GAGE12FP0CL80 117 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 GAGE12GP0CL81 117 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 GAGE12IP0CL82 117 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 RIPPLY3P57055 190 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 SUMO2P61956 95 aaKnown RBP7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 PMCHL1Q16048 86 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 Q8N8P6 123 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 C20orf78Q9BR46 151 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.27
SOX2-OT-244ENST00000627738 IGLV2-18A0A075B6J9 118 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 TRGV2A0A075B6R0 118 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 TRAV4A0A0B4J268 109 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 IGHV1-24A0A0C4DH33 117 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 IGHV4-28A0A0C4DH34 117 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 IGHV3-53P01767 116 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 GYPEP15421 78 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 ZFP2Q6ZN57 461 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 Q6ZSN1 163 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 ZNF479Q96JC4 524 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 SMIM2Q9BVW6 85 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 ST20Q9HBF5 79 aa7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 NXT2Q9NPJ8 142 aaKnown RBP7.08□□□□□ -1.28
SOX2-OT-244ENST00000627738 NACAE9PAV3 2078 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 DNHD1Q96M86 4753 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 TRBV6-5A0A0K0K1A5 114 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 H7C1H1 209 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 DEFB4AO15263 64 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 P0DMU3 169 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 FAM231AP0DMU4 169 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 FAM231CP0DMU5 169 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 MIFP14174 115 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 GAGE13Q4V321 117 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 KPRPQ5T749 579 aaPredicted RBP7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 Q8NAQ8 132 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 EDA2RQ9HAV5 297 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 RETNQ9HD89 108 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 NIT2Q9NQR4 276 aa7.07□□□□□ -1.28
SOX2-OT-244ENST00000627738 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 K7EIL1 84 aa7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 TCAPO15273 167 aa7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 DEFB130BP0DP73 79 aa7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 DEFB130AP0DP74 79 aa7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 POLR2KP53803 58 aaKnown RBP7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 FAM222AQ5U5X8 452 aa7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 NEGR1Q7Z3B1 354 aa7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 LINC00612Q8N6U2 182 aa7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 TMEM70Q9BUB7 260 aa7.06□□□□□ -1.28
SOX2-OT-244ENST00000627738 SDHAF1A6NFY7 115 aa7.05□□□□□ -1.28
SOX2-OT-244ENST00000627738 LYRM9A8MSI8 78 aa7.05□□□□□ -1.28
SOX2-OT-244ENST00000627738 RPL32P62910 135 aaKnown RBP7.05□□□□□ -1.28
SOX2-OT-244ENST00000627738 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
SOX2-OT-244ENST00000627738 NEXN-AS1Q8NBZ9 246 aa7.05□□□□□ -1.28
SOX2-OT-244ENST00000627738 DKK2Q9UBU2 259 aa7.05□□□□□ -1.28
SOX2-OT-244ENST00000627738 TP53TG1Q9Y2A0 90 aa7.05□□□□□ -1.28
SOX2-OT-244ENST00000627738 A0A096LNJ9 63 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 VCYO14598 125 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 CIDEAO60543 219 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 LEPROTL1O95214 131 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 HBDP02042 147 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 LAGE3Q14657 143 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 DEFB121Q5J5C9 76 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 DEFB104AQ8WTQ1 72 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 C18orf15Q96N68 181 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 Q9UF83 564 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 TNFRSF18Q9Y5U5 241 aa7.04□□□□□ -1.28
SOX2-OT-244ENST00000627738 TRGV4A0A0C4DH28 118 aa7.03□□□□□ -1.28
SOX2-OT-244ENST00000627738 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
SOX2-OT-244ENST00000627738 K7EQD1 137 aa7.03□□□□□ -1.28
SOX2-OT-244ENST00000627738 FCER1GP30273 86 aa7.03□□□□□ -1.28
SOX2-OT-244ENST00000627738 KRTDAPP60985 99 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms