RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 C19orf84I3L1E1 186 aa9.74□□□□□ -0.85
SCN8A-209ENST00000627620 C20orf203Q8NBC4 194 aa9.74□□□□□ -0.85
SCN8A-209ENST00000627620 HIGD1BQ9P298 99 aa9.74□□□□□ -0.85
SCN8A-209ENST00000627620 ACACBO00763 2458 aa9.74□□□□□ -0.85
SCN8A-209ENST00000627620 C11orf1Q9H5F2 150 aa9.74□□□□□ -0.85
SCN8A-209ENST00000627620 CITED1Q99966 193 aa9.74□□□□□ -0.85
SCN8A-209ENST00000627620 KLK5Q9Y337 293 aaPredicted RBP9.74□□□□□ -0.85
SCN8A-209ENST00000627620 NDUFB1O75438 58 aa9.74□□□□□ -0.85
SCN8A-209ENST00000627620 TECTAO75443 2155 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 NACAE9PAV3 2078 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 TNCP24821 2201 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 MIR7-3HGQ8N6C7 128 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 SPG11Q96JI7 2443 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 IGHV1-58A0A0C4DH39 117 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 LECT2O14960 151 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 P0C879 139 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 ODF1Q14990 250 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 NREPQ16612 68 aa9.73□□□□□ -0.85
SCN8A-209ENST00000627620 PRORYQ9H606 182 aa9.72□□□□□ -0.85
SCN8A-209ENST00000627620 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
SCN8A-209ENST00000627620 IGKV3D-7A0A0C4DH55 119 aa9.72□□□□□ -0.85
SCN8A-209ENST00000627620 ZNF80P51504 273 aaPredicted RBP9.72□□□□□ -0.85
SCN8A-209ENST00000627620 CEMP1Q6PRD7 247 aaPredicted RBP9.72□□□□□ -0.85
SCN8A-209ENST00000627620 LINC00574Q9H8X3 128 aa9.72□□□□□ -0.85
SCN8A-209ENST00000627620 COL4A3Q01955 1670 aa9.72□□□□□ -0.85
SCN8A-209ENST00000627620 TRBV10-1A0A0K0K1A3 114 aa9.72□□□□□ -0.85
SCN8A-209ENST00000627620 H3BQ85 93 aa9.72□□□□□ -0.85
SCN8A-209ENST00000627620 ATRXP46100 2492 aa9.72□□□□□ -0.85
SCN8A-209ENST00000627620 LGALS9O00182 355 aa9.71□□□□□ -0.85
SCN8A-209ENST00000627620 DIRC1Q969H9 104 aa9.71□□□□□ -0.85
SCN8A-209ENST00000627620 HIVEP2P31629 2446 aa9.71□□□□□ -0.86
SCN8A-209ENST00000627620 TP53TG3Q9ULZ0 132 aa9.71□□□□□ -0.86
SCN8A-209ENST00000627620 LRRC75A-AS1Q8N1F1 130 aa9.71□□□□□ -0.86
SCN8A-209ENST00000627620 TEN1Q86WV5 123 aa9.71□□□□□ -0.86
SCN8A-209ENST00000627620 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
SCN8A-209ENST00000627620 TMEM258P61165 79 aa9.7□□□□□ -0.86
SCN8A-209ENST00000627620 BRWD1-AS2P59051 145 aa9.7□□□□□ -0.86
SCN8A-209ENST00000627620 Q6ZUT4 128 aa9.7□□□□□ -0.86
SCN8A-209ENST00000627620 ADAMTS9Q9P2N4 1935 aa9.7□□□□□ -0.86
SCN8A-209ENST00000627620 P0DMU3 169 aa9.7□□□□□ -0.86
SCN8A-209ENST00000627620 FAM231AP0DMU4 169 aa9.7□□□□□ -0.86
SCN8A-209ENST00000627620 FAM231CP0DMU5 169 aa9.7□□□□□ -0.86
SCN8A-209ENST00000627620 Q6YL49 198 aa9.7□□□□□ -0.86
SCN8A-209ENST00000627620 NDUFA11Q86Y39 141 aa9.7□□□□□ -0.86
SCN8A-209ENST00000627620 Q6ZTI0 123 aa9.69□□□□□ -0.86
SCN8A-209ENST00000627620 C22orf34Q6ZV56 151 aa9.69□□□□□ -0.86
SCN8A-209ENST00000627620 IGHV4-31P0DP07 118 aa9.69□□□□□ -0.86
SCN8A-209ENST00000627620 WFDC2Q14508 124 aa9.69□□□□□ -0.86
SCN8A-209ENST00000627620 JMJD7-PLA2G4BH0Y9G9 81 aa9.69□□□□□ -0.86
SCN8A-209ENST00000627620 IGF1P05019 195 aa9.69□□□□□ -0.86
SCN8A-209ENST00000627620 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
SCN8A-209ENST00000627620 LINC00322Q6ZN03 302 aaPredicted RBP9.68□□□□□ -0.86
SCN8A-209ENST00000627620 C1orf229Q6ZS94 237 aaPredicted RBP9.68□□□□□ -0.86
SCN8A-209ENST00000627620 NFE4Q86UQ8 179 aa9.68□□□□□ -0.86
SCN8A-209ENST00000627620 WFDC11Q8NEX6 87 aa9.68□□□□□ -0.86
SCN8A-209ENST00000627620 ANKHD1Q8IWZ3 2542 aaKnown RBP9.68□□□□□ -0.86
SCN8A-209ENST00000627620 TRAV26-1A0A087WT03 109 aa9.68□□□□□ -0.86
SCN8A-209ENST00000627620 Q6ZPA2 131 aa9.68□□□□□ -0.86
SCN8A-209ENST00000627620 C2orf16Q68DN1 1984 aa9.68□□□□□ -0.86
SCN8A-209ENST00000627620 MP68P56378 58 aa9.68□□□□□ -0.86
SCN8A-209ENST00000627620 FREM1Q5H8C1 2179 aa9.68□□□□□ -0.86
SCN8A-209ENST00000627620 CUL9Q8IWT3 2517 aa9.68□□□□□ -0.86
SCN8A-209ENST00000627620 A0A1B0GX51 115 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 PLA2G5P39877 138 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 TRBV10-2A0A0K0K1G8 114 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 B5MCH6 92 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 PSMB8P28062 276 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 TAX1BP3O14907 124 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 C4orf48Q5BLP8 95 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 A0A1B0GXF2 115 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 IGLV2-8P01709 118 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 HIGD2BQ4VC39 106 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 ODF3Q96PU9 254 aa9.67□□□□□ -0.86
SCN8A-209ENST00000627620 TNRC6AQ8NDV7 1962 aaKnown RBP9.66□□□□□ -0.86
SCN8A-209ENST00000627620 CHKB-CPT1BH3BT56 60 aa9.66□□□□□ -0.86
SCN8A-209ENST00000627620 K7EQG2 157 aa9.66□□□□□ -0.86
SCN8A-209ENST00000627620 LINC00269Q8N2A0 174 aa9.66□□□□□ -0.86
SCN8A-209ENST00000627620 SPANXCQ9NY87 97 aa9.66□□□□□ -0.86
SCN8A-209ENST00000627620 DEFB114Q30KQ6 69 aa9.66□□□□□ -0.86
SCN8A-209ENST00000627620 FAM222AQ5U5X8 452 aa9.65□□□□□ -0.86
SCN8A-209ENST00000627620 ZFAND2AQ8N6M9 145 aa9.65□□□□□ -0.86
SCN8A-209ENST00000627620 CSPG4Q6UVK1 2322 aa9.65□□□□□ -0.86
SCN8A-209ENST00000627620 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
SCN8A-209ENST00000627620 C5orf47Q569G3 176 aa9.65□□□□□ -0.87
SCN8A-209ENST00000627620 REG3AQ06141 175 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 IGKV2-24A0A0C4DH68 120 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 FAM236AA0A1B0GUQ0 79 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 FAM236BA0A1B0GV22 79 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 TMEM256-PLSCR3K7ERE1 68 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 ATOX1O00244 68 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 IGLC6P0CF74 106 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 COX7BP24311 80 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 WFDC9Q8NEX5 89 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 FOXI1Q12951 378 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 H3BT86 120 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 MIAQ16674 131 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 OTOGLQ3ZCN5 2332 aa9.64□□□□□ -0.87
SCN8A-209ENST00000627620 CRIP3Q6Q6R5 217 aa9.63□□□□□ -0.87
SCN8A-209ENST00000627620 FSTL3O95633 263 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms