RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 SPTSSAQ969W0 71 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 TMEM191AQ9H0A3 160 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 IGSF10Q6WRI0 2623 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 NDUFB6O95139 128 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 IFNA17P01571 189 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 CBLN1P23435 193 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 S100A7L2Q5SY68 101 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 KCNRGQ8N5I3 272 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 SPTSSBQ8NFR3 76 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 PFDN5Q99471 154 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 WFDC6Q9BQY6 131 aa0.1□□□□□ -2.39
CDR1-202ENST00000625883 CELSR2Q9HCU4 2923 aa0.09□□□□□ -2.39
CDR1-202ENST00000625883 MYO7AQ13402 2215 aa0.09□□□□□ -2.39
CDR1-202ENST00000625883 DAPK1P53355 1430 aa0.09□□□□□ -2.39
CDR1-202ENST00000625883 SPINK1P00995 79 aa0.09□□□□□ -2.4
CDR1-202ENST00000625883 DPH3Q96FX2 82 aa0.09□□□□□ -2.4
CDR1-202ENST00000625883 ARFGEF1Q9Y6D6 1849 aa0.08□□□□□ -2.4
CDR1-202ENST00000625883 PARP14Q460N5 1801 aa0.08□□□□□ -2.4
CDR1-202ENST00000625883 SNCGO76070 127 aa0.08□□□□□ -2.4
CDR1-202ENST00000625883 TCEAL4Q96EI5 215 aa0.08□□□□□ -2.4
CDR1-202ENST00000625883 NCOR2Q9Y618 2525 aa0.07□□□□□ -2.4
CDR1-202ENST00000625883 GCHFRP30047 84 aa0.07□□□□□ -2.4
CDR1-202ENST00000625883 ZNF818PQ6ZRF7 136 aa0.07□□□□□ -2.4
CDR1-202ENST00000625883 GOLGA3Q08378 1498 aa0.07□□□□□ -2.4
CDR1-202ENST00000625883 CADP27708 2225 aa0.06□□□□□ -2.4
CDR1-202ENST00000625883 DOCK11Q5JSL3 2073 aa0.06□□□□□ -2.4
CDR1-202ENST00000625883 HRNRQ86YZ3 2850 aaPredicted RBP0.06□□□□□ -2.4
CDR1-202ENST00000625883 G3V318 75 aa0.06□□□□□ -2.4
CDR1-202ENST00000625883 APOC4-APOC2K7ER74 178 aa0.06□□□□□ -2.4
CDR1-202ENST00000625883 SCP2D1Q9UJQ7 156 aa0.06□□□□□ -2.4
CDR1-202ENST00000625883 F8P00451 2351 aa0.06□□□□□ -2.4
CDR1-202ENST00000625883 ZMYM4Q5VZL5 1548 aa0.06□□□□□ -2.4
CDR1-202ENST00000625883 TRAV1-2A0A0B4J238 106 aa0.05□□□□□ -2.4
CDR1-202ENST00000625883 PAIP2BQ9ULR5 123 aaKnown RBP0.05□□□□□ -2.4
CDR1-202ENST00000625883 LINC00312Q9Y6C7 94 aa0.05□□□□□ -2.4
CDR1-202ENST00000625883 SIPA1L3O60292 1781 aaPredicted RBP0.05□□□□□ -2.4
CDR1-202ENST00000625883 BICRAQ9NZM4 1560 aa0.05□□□□□ -2.4
CDR1-202ENST00000625883 MYOM3Q5VTT5 1437 aa0.05□□□□□ -2.4
CDR1-202ENST00000625883 ARPC4P59998 168 aa0.04□□□□□ -2.4
CDR1-202ENST00000625883 CCL8P80075 99 aa0.04□□□□□ -2.4
CDR1-202ENST00000625883 CCDC167Q9P0B6 97 aa0.04□□□□□ -2.4
CDR1-202ENST00000625883 UNC79Q9P2D8 2635 aa0.04□□□□□ -2.4
CDR1-202ENST00000625883 GRIN2AQ12879 1464 aa0.04□□□□□ -2.4
CDR1-202ENST00000625883 TRBV10-3A0A0K0K1G6 114 aa0.03□□□□□ -2.4
CDR1-202ENST00000625883 HIST1H1DP16402 221 aaKnown RBP0.03□□□□□ -2.4
CDR1-202ENST00000625883 SEC11CQ9BY50 192 aa0.03□□□□□ -2.4
CDR1-202ENST00000625883 ZNF518AQ6AHZ1 1483 aa0.03□□□□□ -2.4
CDR1-202ENST00000625883 Q5VV11 94 aa0.03□□□□□ -2.41
CDR1-202ENST00000625883 FAM213BQ8TBF2 198 aa0.03□□□□□ -2.41
CDR1-202ENST00000625883 CASKIN1Q8WXD9 1431 aa0.02□□□□□ -2.41
CDR1-202ENST00000625883 UBR5O95071 2799 aaPredicted RBP0.02□□□□□ -2.41
CDR1-202ENST00000625883 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
CDR1-202ENST00000625883 CELSR1Q9NYQ6 3014 aa0.02□□□□□ -2.41
CDR1-202ENST00000625883 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
CDR1-202ENST00000625883 FAM92AA1XBS5 289 aa0.02□□□□□ -2.41
CDR1-202ENST00000625883 NDUFA2O43678 99 aa0.02□□□□□ -2.41
CDR1-202ENST00000625883 SSBP3-AS1Q7Z2R9 100 aa0.02□□□□□ -2.41
CDR1-202ENST00000625883 UBE2DNLQ8IWF7 75 aa0.02□□□□□ -2.41
CDR1-202ENST00000625883 IFT140Q96RY7 1462 aa0.01□□□□□ -2.41
CDR1-202ENST00000625883 ZNF815PA8K554 130 aa0.01□□□□□ -2.41
CDR1-202ENST00000625883 PDCD10Q9BUL8 212 aa0.01□□□□□ -2.41
CDR1-202ENST00000625883 CHD9Q3L8U1 2897 aa0.01□□□□□ -2.41
CDR1-202ENST00000625883 HIVEP3Q5T1R4 2406 aa0□□□□□ -2.41
CDR1-202ENST00000625883 LRRC37A3O60309 1634 aa0□□□□□ -2.41
CDR1-202ENST00000625883 SIX6O95475 246 aa0□□□□□ -2.41
CDR1-202ENST00000625883 CCDC58Q4VC31 144 aa0□□□□□ -2.41
CDR1-202ENST00000625883 AGPAT4-IT1Q9H0P7 198 aa0□□□□□ -2.41
CDR1-202ENST00000625883 ASXL3Q9C0F0 2248 aa-0□□□□□ -2.41
CDR1-202ENST00000625883 HCG22E2RYF7 251 aa-0.01□□□□□ -2.41
CDR1-202ENST00000625883 BAGE3Q86Y29 109 aa-0.01□□□□□ -2.41
CDR1-202ENST00000625883 LSM10Q969L4 123 aaKnown RBP-0.01□□□□□ -2.41
CDR1-202ENST00000625883 LINC00470Q9BZP3 86 aa-0.01□□□□□ -2.41
CDR1-202ENST00000625883 SELENOWP63302 87 aa-0.02□□□□□ -2.41
CDR1-202ENST00000625883 S100A12P80511 92 aa-0.02□□□□□ -2.41
CDR1-202ENST00000625883 RBM3P98179 157 aaKnown RBP-0.02□□□□□ -2.41
CDR1-202ENST00000625883 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
CDR1-202ENST00000625883 U3KQA8 63 aa-0.02□□□□□ -2.41
CDR1-202ENST00000625883 SPEF2Q9C093 1822 aa-0.02□□□□□ -2.41
CDR1-202ENST00000625883 IFT172Q9UG01 1749 aa-0.02□□□□□ -2.41
CDR1-202ENST00000625883 CCL18P55774 89 aa-0.03□□□□□ -2.41
CDR1-202ENST00000625883 ARL11Q969Q4 196 aa-0.03□□□□□ -2.41
CDR1-202ENST00000625883 ANKRD17O75179 2603 aaKnown RBP-0.03□□□□□ -2.41
CDR1-202ENST00000625883 TRAV13-2A0A0B4J235 113 aa-0.03□□□□□ -2.41
CDR1-202ENST00000625883 SPAARA0A1B0GVQ0 90 aa-0.03□□□□□ -2.41
CDR1-202ENST00000625883 GNG7O60262 68 aa-0.03□□□□□ -2.41
CDR1-202ENST00000625883 Q8N8P6 123 aa-0.03□□□□□ -2.41
CDR1-202ENST00000625883 CFTRP13569 1480 aa-0.04□□□□□ -2.42
CDR1-202ENST00000625883 AHCTF1Q8WYP5 2266 aa-0.04□□□□□ -2.42
CDR1-202ENST00000625883 SMIM6P0DI80 62 aa-0.04□□□□□ -2.42
CDR1-202ENST00000625883 CFAP126Q5VTH2 177 aa-0.04□□□□□ -2.42
CDR1-202ENST00000625883 SNRNP25Q9BV90 132 aaKnown RBP-0.04□□□□□ -2.42
CDR1-202ENST00000625883 RERGLQ9H628 205 aa-0.04□□□□□ -2.42
CDR1-202ENST00000625883 PXDNQ92626 1479 aa-0.04□□□□□ -2.42
CDR1-202ENST00000625883 NWD2Q9ULI1 1742 aa-0.05□□□□□ -2.42
CDR1-202ENST00000625883 PIN1P1O15428 100 aa-0.05□□□□□ -2.42
CDR1-202ENST00000625883 PPP1R17O96001 155 aa-0.05□□□□□ -2.42
CDR1-202ENST00000625883 COPS9Q8WXC6 57 aa-0.05□□□□□ -2.42
CDR1-202ENST00000625883 FAM107BQ9H098 131 aa-0.05□□□□□ -2.42
CDR1-202ENST00000625883 SERP1Q9Y6X1 66 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms