RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 LY6HO94772 140 aa5.65□□□□□ -1.51
TRIM49B-202ENST00000622138 PPP1R17O96001 155 aa5.65□□□□□ -1.51
TRIM49B-202ENST00000622138 RPL35AP18077 110 aaKnown RBP5.65□□□□□ -1.51
TRIM49B-202ENST00000622138 NPC2P61916 151 aa5.65□□□□□ -1.51
TRIM49B-202ENST00000622138 LINC00336Q6ZUF6 198 aa5.65□□□□□ -1.51
TRIM49B-202ENST00000622138 RNF125Q96EQ8 232 aa5.65□□□□□ -1.51
TRIM49B-202ENST00000622138 ANKHD1Q8IWZ3 2542 aaKnown RBP5.64□□□□□ -1.51
TRIM49B-202ENST00000622138 ABCA4P78363 2273 aa5.64□□□□□ -1.51
TRIM49B-202ENST00000622138 GRNP28799 593 aaKnown RBP5.64□□□□□ -1.51
TRIM49B-202ENST00000622138 UBE2E1P51965 193 aa5.64□□□□□ -1.51
TRIM49B-202ENST00000622138 ZNF491Q8N8L2 437 aa5.64□□□□□ -1.51
TRIM49B-202ENST00000622138 TIMM17AQ99595 171 aa5.64□□□□□ -1.51
TRIM49B-202ENST00000622138 TIMM21Q9BVV7 248 aa5.64□□□□□ -1.51
TRIM49B-202ENST00000622138 IGHV7-4-1A0A0J9YVY3 117 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 INAFM2P0DMQ5 153 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 KLRB1Q12918 225 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 Q8TAT8 98 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 LINC01560Q8TB33 94 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 SERP1Q9Y6X1 66 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 TRAV12-2A0A075B6T6 113 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 F8W735 103 aaPredicted RBP5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 IGHV3-23P01764 117 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 SYNJ2BPP57105 145 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 NDPQ00604 133 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 CLEC2BQ92478 149 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 EEF1AKMT3Q96AZ1 226 aa5.63□□□□□ -1.51
TRIM49B-202ENST00000622138 ZNF876PQ49A33 203 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 FAM222AQ5U5X8 452 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 Q6JHZ5 121 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 TRAV8-3A0A0A6YYJ7 113 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 IGIPA6NJ69 53 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 NBR2O15453 112 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 TSHBP01222 138 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 C1orf195Q5TG92 126 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 SPANXN1Q5VSR9 72 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 IGFL4Q6B9Z1 124 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 C10orf105Q8TEF2 133 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 FANCD2OSQ96PS1 177 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 PKIGQ9Y2B9 76 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 MUC6Q6W4X9 2439 aa5.62□□□□□ -1.51
TRIM49B-202ENST00000622138 IGKV3D-20A0A0C4DH25 116 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 FAM236DA0A1B0GTK5 79 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 RNF223E7ERA6 249 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 I3L3M4 83 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 SPRY2O43597 315 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 BUB3O43684 328 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 FAM236CP0DP71 79 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 RHOHQ15669 191 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 DYNAPQ8N1N2 210 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 ASH1LQ9NR48 2969 aaKnown RBP5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 SPTA1P02549 2419 aa5.61□□□□□ -1.51
TRIM49B-202ENST00000622138 IGLV11-55A0A075B6I3 123 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 IGHV3OR16-8A0A075B7F1 116 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 A0A0J9YXY3 114 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 CDSNQ15517 529 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 LY6G5BQ8NDX9 201 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 TP53TG1Q9Y2A0 90 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 PTPRQQ9UMZ3 2332 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 NBASA2RRP1 2371 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 IGHV1-69P01742 117 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 EDN2P20800 178 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 NPBQ8NG41 125 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 RNF5Q99942 180 aa5.6□□□□□ -1.51
TRIM49B-202ENST00000622138 ODF3BA8MYP8 253 aa5.59□□□□□ -1.51
TRIM49B-202ENST00000622138 TMEM61Q8N0U2 210 aa5.59□□□□□ -1.51
TRIM49B-202ENST00000622138 COPS9Q8WXC6 57 aa5.59□□□□□ -1.51
TRIM49B-202ENST00000622138 LITAFQ99732 161 aa5.59□□□□□ -1.51
TRIM49B-202ENST00000622138 DPM3Q9P2X0 92 aa5.59□□□□□ -1.51
TRIM49B-202ENST00000622138 SMAD5-AS1Q9Y6J3 95 aa5.59□□□□□ -1.51
TRIM49B-202ENST00000622138 SVEP1Q4LDE5 3571 aa5.59□□□□□ -1.51
TRIM49B-202ENST00000622138 CACNA1BQ00975 2339 aa5.59□□□□□ -1.51
TRIM49B-202ENST00000622138 MED13LQ71F56 2210 aa5.59□□□□□ -1.51
TRIM49B-202ENST00000622138 IGHV3-35A0A0C4DH35 117 aa5.59□□□□□ -1.52
TRIM49B-202ENST00000622138 USP17L23D6RBM5 183 aa5.59□□□□□ -1.52
TRIM49B-202ENST00000622138 MRPS36P82909 103 aaKnown RBP5.59□□□□□ -1.52
TRIM49B-202ENST00000622138 DAZ2Q13117 558 aaKnown RBP5.59□□□□□ -1.52
TRIM49B-202ENST00000622138 MIAQ16674 131 aa5.59□□□□□ -1.52
TRIM49B-202ENST00000622138 DAZ4Q86SG3 579 aaKnown RBP5.59□□□□□ -1.52
TRIM49B-202ENST00000622138 C20orf173Q96LM9 149 aa5.59□□□□□ -1.52
TRIM49B-202ENST00000622138 DAZ1Q9NQZ3 744 aaKnown RBP5.59□□□□□ -1.52
TRIM49B-202ENST00000622138 DAZ3Q9NR90 486 aaKnown RBP5.59□□□□□ -1.52
TRIM49B-202ENST00000622138 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
TRIM49B-202ENST00000622138 COX7A2LO14548 114 aa5.58□□□□□ -1.52
TRIM49B-202ENST00000622138 ATRXP46100 2492 aa5.58□□□□□ -1.52
TRIM49B-202ENST00000622138 FHL2Q14192 279 aa5.58□□□□□ -1.52
TRIM49B-202ENST00000622138 RPL39LQ96EH5 51 aaKnown RBP5.58□□□□□ -1.52
TRIM49B-202ENST00000622138 C11orf21Q9P2W6 132 aa5.58□□□□□ -1.52
TRIM49B-202ENST00000622138 WNK2Q9Y3S1 2297 aa5.58□□□□□ -1.52
TRIM49B-202ENST00000622138 IGHV3OR16-10A0A075B7F0 116 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 PRAC2D3DTV9 90 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 MED14OSP0DP75 135 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 TIRAPP58753 221 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 NSUN5P1Q3KNT7 163 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 TMEM243Q9BU79 118 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 C16orf95Q9H693 158 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 IGF2RP11717 2491 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 PTPRZ1P23471 2315 aaPredicted RBP5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 CTSGP08311 255 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 Q8N6K4 173 aa5.57□□□□□ -1.52
TRIM49B-202ENST00000622138 TIMM17BO60830 172 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms