RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
CBWD3-216ENST00000621396 FA2HQ7L5A8 372 aa11.3□□□□□ -0.6
CBWD3-216ENST00000621396 PTH2Q96A98 100 aa11.3□□□□□ -0.6
CBWD3-216ENST00000621396 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
CBWD3-216ENST00000621396 MIFP14174 115 aa11.29□□□□□ -0.6
CBWD3-216ENST00000621396 PIK3CD-AS1Q5SR53 167 aa11.29□□□□□ -0.6
CBWD3-216ENST00000621396 OR10D4PQ8NGN7 298 aa11.29□□□□□ -0.6
CBWD3-216ENST00000621396 DKK2Q9UBU2 259 aa11.29□□□□□ -0.6
CBWD3-216ENST00000621396 HUWE1Q7Z6Z7 4374 aaKnown RBP11.29□□□□□ -0.6
CBWD3-216ENST00000621396 TRAV4A0A0B4J268 109 aa11.28□□□□□ -0.6
CBWD3-216ENST00000621396 IGHV1-24A0A0C4DH33 117 aa11.28□□□□□ -0.6
CBWD3-216ENST00000621396 SLC25A29Q8N8R3 303 aa11.28□□□□□ -0.6
CBWD3-216ENST00000621396 IGLV2-18A0A075B6J9 118 aa11.28□□□□□ -0.6
CBWD3-216ENST00000621396 SDHAF1A6NFY7 115 aa11.28□□□□□ -0.6
CBWD3-216ENST00000621396 PACRGQ96M98 296 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-216ENST00000621396 LOC100131303A0A0U1RQF7 123 aa11.27□□□□□ -0.6
CBWD3-216ENST00000621396 TMEM70Q9BUB7 260 aa11.27□□□□□ -0.6
CBWD3-216ENST00000621396 LAMTOR2Q9Y2Q5 125 aa11.27□□□□□ -0.6
CBWD3-216ENST00000621396 IGHV3-38A0A0C4DH36 116 aa11.27□□□□□ -0.61
CBWD3-216ENST00000621396 ESDP10768 282 aa11.27□□□□□ -0.61
CBWD3-216ENST00000621396 LINC00173Q6ZV60 143 aa11.27□□□□□ -0.61
CBWD3-216ENST00000621396 SMIM2Q9BVW6 85 aa11.27□□□□□ -0.61
CBWD3-216ENST00000621396 ST20Q9HBF5 79 aa11.27□□□□□ -0.61
CBWD3-216ENST00000621396 NIT2Q9NQR4 276 aa11.27□□□□□ -0.61
CBWD3-216ENST00000621396 PRKDCP78527 4128 aaKnown RBP11.27□□□□□ -0.61
CBWD3-216ENST00000621396 TRGV4A0A0C4DH28 118 aa11.26□□□□□ -0.61
CBWD3-216ENST00000621396 A0A096LNJ9 63 aa11.26□□□□□ -0.61
CBWD3-216ENST00000621396 RHODO00212 210 aa11.26□□□□□ -0.61
CBWD3-216ENST00000621396 NEXN-AS1Q8NBZ9 246 aa11.26□□□□□ -0.61
CBWD3-216ENST00000621396 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-216ENST00000621396 TMEM18Q96B42 140 aa11.26□□□□□ -0.61
CBWD3-216ENST00000621396 HTN3P15516 51 aa11.25□□□□□ -0.61
CBWD3-216ENST00000621396 FHL2Q14192 279 aa11.25□□□□□ -0.61
CBWD3-216ENST00000621396 ZFP2Q6ZN57 461 aa11.25□□□□□ -0.61
CBWD3-216ENST00000621396 CHCHD1Q96BP2 118 aaKnown RBP11.25□□□□□ -0.61
CBWD3-216ENST00000621396 A0A0J9YWU9 116 aa11.25□□□□□ -0.61
CBWD3-216ENST00000621396 Q8N8P6 123 aa11.25□□□□□ -0.61
CBWD3-216ENST00000621396 POLR2KP53803 58 aaKnown RBP11.24□□□□□ -0.61
CBWD3-216ENST00000621396 DAD1P61803 113 aa11.24□□□□□ -0.61
CBWD3-216ENST00000621396 ZNRF2Q8NHG8 242 aa11.24□□□□□ -0.61
CBWD3-216ENST00000621396 C20orf78Q9BR46 151 aa11.24□□□□□ -0.61
CBWD3-216ENST00000621396 LINC00612Q8N6U2 182 aa11.24□□□□□ -0.61
CBWD3-216ENST00000621396 NXT2Q9NPJ8 142 aaKnown RBP11.24□□□□□ -0.61
CBWD3-216ENST00000621396 TP53TG1Q9Y2A0 90 aa11.24□□□□□ -0.61
CBWD3-216ENST00000621396 TNFRSF18Q9Y5U5 241 aa11.24□□□□□ -0.61
CBWD3-216ENST00000621396 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 SPART-AS1P0CW21 52 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 BTF3P20290 206 aaKnown RBP11.23□□□□□ -0.61
CBWD3-216ENST00000621396 NDUFAF3Q9BU61 184 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 STAB2Q8WWQ8 2551 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 GAGE12JA6NER3 117 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 H7C1H1 209 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 GAGE1Q13065 139 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 GAGE4Q13068 117 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 GAGE5Q13069 117 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 GAGE13Q4V321 117 aa11.23□□□□□ -0.61
CBWD3-216ENST00000621396 DNAH9Q9NYC9 4486 aa11.22□□□□□ -0.61
CBWD3-216ENST00000621396 H0Y8G0 127 aa11.22□□□□□ -0.61
CBWD3-216ENST00000621396 K7EQD1 137 aa11.22□□□□□ -0.61
CBWD3-216ENST00000621396 C18orf15Q96N68 181 aa11.22□□□□□ -0.61
CBWD3-216ENST00000621396 A0A0J9YY99 117 aa11.21□□□□□ -0.61
CBWD3-216ENST00000621396 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
CBWD3-216ENST00000621396 PPP1R17O96001 155 aa11.21□□□□□ -0.61
CBWD3-216ENST00000621396 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.61
CBWD3-216ENST00000621396 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.61
CBWD3-216ENST00000621396 LAGE3Q14657 143 aa11.21□□□□□ -0.61
CBWD3-216ENST00000621396 TM2D3Q9BRN9 247 aa11.21□□□□□ -0.61
CBWD3-216ENST00000621396 KRTDAPP60985 99 aa11.2□□□□□ -0.62
CBWD3-216ENST00000621396 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
CBWD3-216ENST00000621396 A0A096LPF7 62 aa11.2□□□□□ -0.62
CBWD3-216ENST00000621396 TRBV27A0A0K0K1C4 114 aa11.2□□□□□ -0.62
CBWD3-216ENST00000621396 VCYO14598 125 aa11.2□□□□□ -0.62
CBWD3-216ENST00000621396 LEPROTL1O95214 131 aa11.2□□□□□ -0.62
CBWD3-216ENST00000621396 NUDT3O95989 172 aa11.2□□□□□ -0.62
CBWD3-216ENST00000621396 CDPF1Q6NVV7 123 aa11.2□□□□□ -0.62
CBWD3-216ENST00000621396 DEFA6Q01524 100 aa11.19□□□□□ -0.62
CBWD3-216ENST00000621396 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
CBWD3-216ENST00000621396 KIR2DL4Q99706 377 aa11.19□□□□□ -0.62
CBWD3-216ENST00000621396 SPATA25Q9BR10 227 aa11.19□□□□□ -0.62
CBWD3-216ENST00000621396 TRBV7-3A0A075B6L6 115 aa11.19□□□□□ -0.62
CBWD3-216ENST00000621396 F5H768 121 aa11.19□□□□□ -0.62
CBWD3-216ENST00000621396 RPL39P62891 51 aaKnown RBP11.19□□□□□ -0.62
CBWD3-216ENST00000621396 PYY3Q5JQD4 70 aa11.19□□□□□ -0.62
CBWD3-216ENST00000621396 NANOS2P60321 138 aaKnown RBP11.18□□□□□ -0.62
CBWD3-216ENST00000621396 Q6ZTC4 211 aa11.18□□□□□ -0.62
CBWD3-216ENST00000621396 EDA2RQ9HAV5 297 aa11.18□□□□□ -0.62
CBWD3-216ENST00000621396 I3L3M4 83 aa11.18□□□□□ -0.62
CBWD3-216ENST00000621396 TSHBP01222 138 aa11.18□□□□□ -0.62
CBWD3-216ENST00000621396 HBDP02042 147 aa11.18□□□□□ -0.62
CBWD3-216ENST00000621396 FCER1GP30273 86 aa11.18□□□□□ -0.62
CBWD3-216ENST00000621396 TRBV6-4A0A1B0GX49 114 aa11.17□□□□□ -0.62
CBWD3-216ENST00000621396 C3orf79P0CE67 100 aa11.17□□□□□ -0.62
CBWD3-216ENST00000621396 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
CBWD3-216ENST00000621396 LINC01546A6NGU7 62 aa11.17□□□□□ -0.62
CBWD3-216ENST00000621396 ATP5G1P05496 136 aa11.17□□□□□ -0.62
CBWD3-216ENST00000621396 SPATA12Q7Z6I5 190 aa11.17□□□□□ -0.62
CBWD3-216ENST00000621396 GYPEP15421 78 aa11.16□□□□□ -0.62
CBWD3-216ENST00000621396 CRYBA4P53673 196 aa11.16□□□□□ -0.62
CBWD3-216ENST00000621396 RPL36AP83881 106 aaKnown RBP11.16□□□□□ -0.62
CBWD3-216ENST00000621396 RPL36ALQ969Q0 106 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms