RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 A0A087WWL8 130 aa15.71■□□□□ 0.11
LIME1-210ENST00000621325 RBMY1BA6NDE4 496 aaKnown RBP15.71■□□□□ 0.11
LIME1-210ENST00000621325 RBMY1EA6NEQ0 496 aaKnown RBP15.71■□□□□ 0.11
LIME1-210ENST00000621325 J3QR89 54 aa15.71■□□□□ 0.11
LIME1-210ENST00000621325 RBMY1DP0C7P1 496 aaKnown RBP15.71■□□□□ 0.11
LIME1-210ENST00000621325 LAGE3Q14657 143 aa15.71■□□□□ 0.11
LIME1-210ENST00000621325 LINC01006Q8NI28 216 aa15.71■□□□□ 0.11
LIME1-210ENST00000621325 CITED2Q99967 270 aaPredicted RBP15.71■□□□□ 0.11
LIME1-210ENST00000621325 MTURNQ8N3F0 131 aa15.7■□□□□ 0.1
LIME1-210ENST00000621325 C9orf85Q96MD7 179 aa15.7■□□□□ 0.1
LIME1-210ENST00000621325 DKK2Q9UBU2 259 aa15.7■□□□□ 0.1
LIME1-210ENST00000621325 SUMO2P61956 95 aaKnown RBP15.7■□□□□ 0.1
LIME1-210ENST00000621325 ZNF418Q8TF45 676 aaPredicted RBP15.7■□□□□ 0.1
LIME1-210ENST00000621325 H3BMM0 161 aa15.69■□□□□ 0.1
LIME1-210ENST00000621325 RNASE1P07998 156 aaKnown RBP15.69■□□□□ 0.1
LIME1-210ENST00000621325 FAM110AQ9BQ89 295 aa15.69■□□□□ 0.1
LIME1-210ENST00000621325 HLA-DRB4P13762 266 aa15.69■□□□□ 0.1
LIME1-210ENST00000621325 ETDBQ3ZM63 59 aa15.69■□□□□ 0.1
LIME1-210ENST00000621325 HLA-DRB4X5D2U9 266 aa15.69■□□□□ 0.1
LIME1-210ENST00000621325 MAP6D1Q9H9H5 199 aa15.68■□□□□ 0.1
LIME1-210ENST00000621325 CCL24O00175 119 aa15.68■□□□□ 0.1
LIME1-210ENST00000621325 FHL3Q13643 280 aa15.68■□□□□ 0.1
LIME1-210ENST00000621325 POM121L12Q8N7R1 296 aa15.67■□□□□ 0.1
LIME1-210ENST00000621325 ERG28Q9UKR5 140 aa15.67■□□□□ 0.1
LIME1-210ENST00000621325 TRAV2A0A0B4J234 112 aa15.67■□□□□ 0.1
LIME1-210ENST00000621325 C20orf78Q9BR46 151 aa15.67■□□□□ 0.1
LIME1-210ENST00000621325 HIVEP2P31629 2446 aa15.67■□□□□ 0.1
LIME1-210ENST00000621325 PRM2P04554 102 aa15.66■□□□□ 0.1
LIME1-210ENST00000621325 B5MCH6 92 aa15.66■□□□□ 0.1
LIME1-210ENST00000621325 PRSS1P07477 247 aa15.66■□□□□ 0.1
LIME1-210ENST00000621325 HTN1P15515 57 aa15.66■□□□□ 0.1
LIME1-210ENST00000621325 ZNF256Q9Y2P7 627 aaPredicted RBP15.66■□□□□ 0.1
LIME1-210ENST00000621325 SPINK8P0C7L1 97 aa15.65■□□□□ 0.1
LIME1-210ENST00000621325 FAM74A4Q5TZK3 123 aa15.65■□□□□ 0.1
LIME1-210ENST00000621325 SUMO4Q6EEV6 95 aa15.65■□□□□ 0.1
LIME1-210ENST00000621325 A8MTW9 85 aa15.65■□□□□ 0.1
LIME1-210ENST00000621325 SMIM20Q8N5G0 67 aa15.65■□□□□ 0.1
LIME1-210ENST00000621325 SIVA1O15304 175 aa15.64■□□□□ 0.09
LIME1-210ENST00000621325 DEFB104AQ8WTQ1 72 aa15.64■□□□□ 0.09
LIME1-210ENST00000621325 C16orf95Q9H693 158 aa15.64■□□□□ 0.09
LIME1-210ENST00000621325 F5H697 171 aa15.64■□□□□ 0.09
LIME1-210ENST00000621325 MT-ATP8P03928 68 aa15.63■□□□□ 0.09
LIME1-210ENST00000621325 NIPBLQ6KC79 2804 aaeCLIP15.63■□□□□ 0.09
LIME1-210ENST00000621325 K7ERJ3 54 aa15.63■□□□□ 0.09
LIME1-210ENST00000621325 HILS1P60008 231 aa15.62■□□□□ 0.09
LIME1-210ENST00000621325 GAGE5Q13069 117 aa15.62■□□□□ 0.09
LIME1-210ENST00000621325 GAGE6Q13070 117 aa15.62■□□□□ 0.09
LIME1-210ENST00000621325 CRYGDP07320 174 aa15.61■□□□□ 0.09
LIME1-210ENST00000621325 SMIM13P0DJ93 91 aa15.61■□□□□ 0.09
LIME1-210ENST00000621325 ODF3L2Q3SX64 289 aa15.61■□□□□ 0.09
LIME1-210ENST00000621325 ZNF876PQ49A33 203 aa15.61■□□□□ 0.09
LIME1-210ENST00000621325 BOD1L2Q8IYS8 172 aa15.61■□□□□ 0.09
LIME1-210ENST00000621325 SETXQ7Z333 2677 aaKnown RBP15.61■□□□□ 0.09
LIME1-210ENST00000621325 F8W1H4 67 aa15.6■□□□□ 0.09
LIME1-210ENST00000621325 ATP5LO75964 103 aa15.6■□□□□ 0.09
LIME1-210ENST00000621325 SYT8Q8NBV8 401 aa15.6■□□□□ 0.09
LIME1-210ENST00000621325 CDIP1Q9H305 208 aa15.6■□□□□ 0.09
LIME1-210ENST00000621325 RPL32P62910 135 aaKnown RBP15.6■□□□□ 0.09
LIME1-210ENST00000621325 TRGV11A0A075B6L2 103 aa15.59■□□□□ 0.09
LIME1-210ENST00000621325 ORMDL2Q53FV1 153 aa15.59■□□□□ 0.09
LIME1-210ENST00000621325 TNFRSF18Q9Y5U5 241 aa15.59■□□□□ 0.09
LIME1-210ENST00000621325 H3BMG7 143 aa15.59■□□□□ 0.09
LIME1-210ENST00000621325 ZMAT4Q9H898 229 aa15.59■□□□□ 0.09
LIME1-210ENST00000621325 PPP1R17O96001 155 aa15.58■□□□□ 0.09
LIME1-210ENST00000621325 LY6G6DO95868 133 aa15.58■□□□□ 0.08
LIME1-210ENST00000621325 ZNF56Q15929 161 aa15.58■□□□□ 0.08
LIME1-210ENST00000621325 ANAPC13Q9BS18 74 aa15.58■□□□□ 0.08
LIME1-210ENST00000621325 OTOGQ6ZRI0 2925 aa15.58■□□□□ 0.08
LIME1-210ENST00000621325 FXYD2P54710 66 aa15.57■□□□□ 0.08
LIME1-210ENST00000621325 TOMM6Q96B49 74 aa15.57■□□□□ 0.08
LIME1-210ENST00000621325 HHLA3Q9XRX5 114 aa15.57■□□□□ 0.08
LIME1-210ENST00000621325 CYSLTR1Q9Y271 337 aa15.57■□□□□ 0.08
LIME1-210ENST00000621325 MRPL35Q9NZE8 188 aaKnown RBP15.57■□□□□ 0.08
LIME1-210ENST00000621325 POLR2KP53803 58 aaKnown RBP15.56■□□□□ 0.08
LIME1-210ENST00000621325 MORN3Q6PF18 240 aaPredicted RBP15.56■□□□□ 0.08
LIME1-210ENST00000621325 C2orf66Q6UXQ4 117 aa15.56■□□□□ 0.08
LIME1-210ENST00000621325 XGP55808 180 aa15.56■□□□□ 0.08
LIME1-210ENST00000621325 PCP2Q8IVA1 136 aa15.56■□□□□ 0.08
LIME1-210ENST00000621325 SCGB3A1Q96QR1 104 aa15.56■□□□□ 0.08
LIME1-210ENST00000621325 TMEM160Q9NX00 188 aa15.56■□□□□ 0.08
LIME1-210ENST00000621325 K7EMI3 77 aa15.55■□□□□ 0.08
LIME1-210ENST00000621325 M0QY20 66 aa15.55■□□□□ 0.08
LIME1-210ENST00000621325 GCSHP23434 173 aa15.55■□□□□ 0.08
LIME1-210ENST00000621325 JMJD1CQ15652 2540 aa15.55■□□□□ 0.08
LIME1-210ENST00000621325 TRAV25A0A0B4J276 109 aa15.55■□□□□ 0.08
LIME1-210ENST00000621325 ADARB2-AS1A8MUL3 147 aa15.55■□□□□ 0.08
LIME1-210ENST00000621325 IGKCP01834 107 aa15.55■□□□□ 0.08
LIME1-210ENST00000621325 TM2D2Q9BX73 214 aa15.55■□□□□ 0.08
LIME1-210ENST00000621325 SDHAF1A6NFY7 115 aa15.54■□□□□ 0.08
LIME1-210ENST00000621325 NMUP48645 174 aa15.54■□□□□ 0.08
LIME1-210ENST00000621325 PROK1P58294 105 aa15.54■□□□□ 0.08
LIME1-210ENST00000621325 NSUN5P1Q3KNT7 163 aa15.54■□□□□ 0.08
LIME1-210ENST00000621325 C1QTNF4Q9BXJ3 329 aa15.54■□□□□ 0.08
LIME1-210ENST00000621325 IGKV2D-26A0A0A0MRZ7 120 aa15.53■□□□□ 0.08
LIME1-210ENST00000621325 DPM2O94777 84 aa15.53■□□□□ 0.08
LIME1-210ENST00000621325 Q6ZUT4 128 aa15.53■□□□□ 0.08
LIME1-210ENST00000621325 PHLDA1Q8WV24 401 aaPredicted RBP15.53■□□□□ 0.08
LIME1-210ENST00000621325 XCL2Q9UBD3 114 aa15.53■□□□□ 0.08
LIME1-210ENST00000621325 A0A087WX48 190 aa15.53■□□□□ 0.08
LIME1-210ENST00000621325 LINC01587Q99440 93 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms