RNA–Protein interactions for RNA: ENST00000619678.1

SRGAP2B-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

TSL 5 BASIC

Gene SRGAP2B, Length 1,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-205ENST00000619678 NUDT3O95989 172 aa11.24□□□□□ -0.61
SRGAP2B-205ENST00000619678 GATA1P15976 413 aaPredicted RBP11.24□□□□□ -0.61
SRGAP2B-205ENST00000619678 NDUFA6P56556 154 aa11.24□□□□□ -0.61
SRGAP2B-205ENST00000619678 LGALS9BQ3B8N2 356 aa11.24□□□□□ -0.61
SRGAP2B-205ENST00000619678 EPPK1P58107 5090 aaKnown RBP11.23□□□□□ -0.61
SRGAP2B-205ENST00000619678 KMT2AQ03164 3969 aa11.23□□□□□ -0.61
SRGAP2B-205ENST00000619678 RS1O15537 224 aa11.23□□□□□ -0.61
SRGAP2B-205ENST00000619678 IQCJQ1A5X6 159 aa11.23□□□□□ -0.61
SRGAP2B-205ENST00000619678 CFAP126Q5VTH2 177 aa11.23□□□□□ -0.61
SRGAP2B-205ENST00000619678 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
SRGAP2B-205ENST00000619678 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
SRGAP2B-205ENST00000619678 NRACQ8N912 160 aa11.23□□□□□ -0.61
SRGAP2B-205ENST00000619678 TRGV1A0A0A0MS02 117 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 A8MWV9 139 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 GAGE7O76087 117 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 NPYP01303 97 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 PPBPP02775 128 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 CKS2P33552 79 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 SNRPEP62304 92 aaKnown RBP11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 LINC00336Q6ZUF6 198 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 URB1-AS1Q96HZ7 61 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 PRELID3AQ96N28 172 aa11.22□□□□□ -0.61
SRGAP2B-205ENST00000619678 IGLV2-18A0A075B6J9 118 aa11.21□□□□□ -0.61
SRGAP2B-205ENST00000619678 NUPR1O60356 82 aa11.21□□□□□ -0.61
SRGAP2B-205ENST00000619678 MGPP08493 103 aa11.2□□□□□ -0.62
SRGAP2B-205ENST00000619678 HOXA5P20719 270 aa11.2□□□□□ -0.62
SRGAP2B-205ENST00000619678 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
SRGAP2B-205ENST00000619678 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
SRGAP2B-205ENST00000619678 Q6ZSN1 163 aa11.2□□□□□ -0.62
SRGAP2B-205ENST00000619678 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
SRGAP2B-205ENST00000619678 SMIM17P0DL12 118 aa11.19□□□□□ -0.62
SRGAP2B-205ENST00000619678 CCL18P55774 89 aa11.19□□□□□ -0.62
SRGAP2B-205ENST00000619678 M0QY20 66 aa11.19□□□□□ -0.62
SRGAP2B-205ENST00000619678 SERF1AO75920 110 aa11.19□□□□□ -0.62
SRGAP2B-205ENST00000619678 TNFRSF6BO95407 300 aa11.19□□□□□ -0.62
SRGAP2B-205ENST00000619678 S100A6P06703 90 aa11.19□□□□□ -0.62
SRGAP2B-205ENST00000619678 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
SRGAP2B-205ENST00000619678 LAMTOR2Q9Y2Q5 125 aa11.19□□□□□ -0.62
SRGAP2B-205ENST00000619678 LOC105371267A0A1B0GV96 52 aa11.18□□□□□ -0.62
SRGAP2B-205ENST00000619678 IFITM10A6NMD0 228 aa11.18□□□□□ -0.62
SRGAP2B-205ENST00000619678 PRSS47A8MTI9 375 aa11.18□□□□□ -0.62
SRGAP2B-205ENST00000619678 ESDP10768 282 aa11.18□□□□□ -0.62
SRGAP2B-205ENST00000619678 ZFP2Q6ZN57 461 aa11.18□□□□□ -0.62
SRGAP2B-205ENST00000619678 ZNF479Q96JC4 524 aa11.18□□□□□ -0.62
SRGAP2B-205ENST00000619678 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
SRGAP2B-205ENST00000619678 IGHV3-73A0A0B4J1V6 119 aa11.17□□□□□ -0.62
SRGAP2B-205ENST00000619678 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
SRGAP2B-205ENST00000619678 BAGE3Q86Y29 109 aa11.17□□□□□ -0.62
SRGAP2B-205ENST00000619678 HIST3H2BBQ8N257 126 aa11.17□□□□□ -0.62
SRGAP2B-205ENST00000619678 C18orf15Q96N68 181 aa11.17□□□□□ -0.62
SRGAP2B-205ENST00000619678 A0A0J9YY99 117 aa11.16□□□□□ -0.62
SRGAP2B-205ENST00000619678 RHODO00212 210 aa11.16□□□□□ -0.62
SRGAP2B-205ENST00000619678 ZNF56Q15929 161 aa11.16□□□□□ -0.62
SRGAP2B-205ENST00000619678 NIT1Q86X76 327 aa11.16□□□□□ -0.62
SRGAP2B-205ENST00000619678 Q9UF83 564 aa11.16□□□□□ -0.62
SRGAP2B-205ENST00000619678 BIRC6Q9NR09 4857 aa11.15□□□□□ -0.62
SRGAP2B-205ENST00000619678 F5H697 171 aa11.15□□□□□ -0.62
SRGAP2B-205ENST00000619678 IGHV3-53P01767 116 aa11.15□□□□□ -0.62
SRGAP2B-205ENST00000619678 OR4C5Q8NGB2 326 aa11.15□□□□□ -0.62
SRGAP2B-205ENST00000619678 LINC01546A6NGU7 62 aa11.14□□□□□ -0.63
SRGAP2B-205ENST00000619678 IFI27P40305 119 aaPredicted RBP11.14□□□□□ -0.63
SRGAP2B-205ENST00000619678 TRBV6-5A0A0K0K1A5 114 aa11.13□□□□□ -0.63
SRGAP2B-205ENST00000619678 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
SRGAP2B-205ENST00000619678 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
SRGAP2B-205ENST00000619678 Q6ZR54 194 aa11.13□□□□□ -0.63
SRGAP2B-205ENST00000619678 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
SRGAP2B-205ENST00000619678 H3BNG1 76 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 LINC00614P0C842 121 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 POLR2KP53803 58 aaKnown RBP11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 SUMO2P61956 95 aaKnown RBP11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 PDZD11Q5EBL8 140 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 C1orf134Q5TEV5 83 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 MAP1LC3AQ9H492 121 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 LINC00588Q9Y4M8 146 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 RTL8CO15255 209 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 PPP1R17O96001 155 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 RPL32P62910 135 aaKnown RBP11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 FHL2Q14192 279 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 NIT2Q9NQR4 276 aa11.12□□□□□ -0.63
SRGAP2B-205ENST00000619678 CIDEAO60543 219 aa11.11□□□□□ -0.63
SRGAP2B-205ENST00000619678 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
SRGAP2B-205ENST00000619678 Q8N8P6 123 aa11.11□□□□□ -0.63
SRGAP2B-205ENST00000619678 PRSS3P2Q8NHM4 247 aa11.11□□□□□ -0.63
SRGAP2B-205ENST00000619678 HIST1H2BLQ99880 126 aa11.11□□□□□ -0.63
SRGAP2B-205ENST00000619678 SMIM2Q9BVW6 85 aa11.11□□□□□ -0.63
SRGAP2B-205ENST00000619678 VPS13DQ5THJ4 4388 aa11.11□□□□□ -0.63
SRGAP2B-205ENST00000619678 TMEM70Q9BUB7 260 aa11.1□□□□□ -0.63
SRGAP2B-205ENST00000619678 NXT2Q9NPJ8 142 aaKnown RBP11.1□□□□□ -0.63
SRGAP2B-205ENST00000619678 A0A096LNJ9 63 aa11.09□□□□□ -0.63
SRGAP2B-205ENST00000619678 NBDYA0A0U1RRE5 68 aa11.09□□□□□ -0.63
SRGAP2B-205ENST00000619678 SLC25A29Q8N8R3 303 aa11.09□□□□□ -0.63
SRGAP2B-205ENST00000619678 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms