RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	SPINK13	Q1W4C9	94 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	MAPK1IP1L	Q8NDC0	245 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	NRGN	Q92686	78 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	MDFIC	Q9P1T7	246 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	IGHV3-73	A0A0B4J1V6	119 aa		10.81	□□□□□ -0.68
SMTN-223	ENST00000619644	SLC25A20	O43772	301 aa		10.81	□□□□□ -0.68
SMTN-223	ENST00000619644	NHLRC4	P0CG21	123 aa	Predicted RBP	10.81	□□□□□ -0.68
SMTN-223	ENST00000619644	TLN2	Q9Y4G6	2542 aa		10.81	□□□□□ -0.68
SMTN-223	ENST00000619644	PRO1854	Q9UHT4	67 aa		10.81	□□□□□ -0.68
SMTN-223	ENST00000619644		C9JAW5	83 aa		10.8	□□□□□ -0.68
SMTN-223	ENST00000619644	PPP1R17	O96001	155 aa		10.8	□□□□□ -0.68
SMTN-223	ENST00000619644	TSHB	P01222	138 aa		10.8	□□□□□ -0.68
SMTN-223	ENST00000619644	CRIP2	P52943	208 aa	Predicted RBP	10.8	□□□□□ -0.68
SMTN-223	ENST00000619644	C19orf54	Q5BKX5	351 aa		10.8	□□□□□ -0.68
SMTN-223	ENST00000619644	KLK9	Q2XQG4	91 aa		10.8	□□□□□ -0.68
SMTN-223	ENST00000619644	RAX2	Q96IS3	184 aa		10.8	□□□□□ -0.68
SMTN-223	ENST00000619644	VCY	O14598	125 aa		10.79	□□□□□ -0.68
SMTN-223	ENST00000619644	PMVK	Q15126	192 aa		10.79	□□□□□ -0.68
SMTN-223	ENST00000619644	TRPT1	Q86TN4	253 aa	Known RBP	10.79	□□□□□ -0.68
SMTN-223	ENST00000619644	SLC25A29	Q8N8R3	303 aa		10.79	□□□□□ -0.68
SMTN-223	ENST00000619644	CFAP46	Q8IYW2	2715 aa		10.79	□□□□□ -0.68
SMTN-223	ENST00000619644	AVP	P01185	164 aa		10.79	□□□□□ -0.68
SMTN-223	ENST00000619644		A6NDX4	124 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	RHOD	O00212	210 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	SYNJ2BP	P57105	145 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	IGHV4-59	P01825	116 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	MSMB	P08118	114 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	GAGE2B	Q13066	116 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	GAGE2E	Q4V326	116 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	PAPPA-AS1	Q5QFB9	102 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	GAGE2D	Q9UEU5	116 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	ZFYVE26	Q68DK2	2539 aa		10.78	□□□□□ -0.68
SMTN-223	ENST00000619644	SETD2	Q9BYW2	2564 aa	Predicted RBP	10.77	□□□□□ -0.68
SMTN-223	ENST00000619644	TRAV4	A0A0B4J268	109 aa		10.77	□□□□□ -0.68
SMTN-223	ENST00000619644	SNCG	O76070	127 aa		10.77	□□□□□ -0.68
SMTN-223	ENST00000619644	LGALS3	P17931	250 aa	Known RBP	10.77	□□□□□ -0.68
SMTN-223	ENST00000619644	CRLF1	O75462	422 aa		10.77	□□□□□ -0.69
SMTN-223	ENST00000619644		Q8N1Y9	231 aa		10.77	□□□□□ -0.69
SMTN-223	ENST00000619644	C10orf105	Q8TEF2	133 aa		10.77	□□□□□ -0.69
SMTN-223	ENST00000619644	WNK1	Q9H4A3	2382 aa		10.77	□□□□□ -0.69
SMTN-223	ENST00000619644	NDUFV3	P56181	108 aa	Known RBP	10.77	□□□□□ -0.69
SMTN-223	ENST00000619644	SNRPD3	P62318	126 aa	Known RBP	10.77	□□□□□ -0.69
SMTN-223	ENST00000619644		A4D1N5	150 aa		10.76	□□□□□ -0.69
SMTN-223	ENST00000619644	LINC00315	P59091	139 aa		10.76	□□□□□ -0.69
SMTN-223	ENST00000619644	IGIP	A6NJ69	53 aa		10.76	□□□□□ -0.69
SMTN-223	ENST00000619644	EIF4EBP3	O60516	100 aa	Predicted RBP	10.76	□□□□□ -0.69
SMTN-223	ENST00000619644	ZNF876P	Q49A33	203 aa		10.76	□□□□□ -0.69
SMTN-223	ENST00000619644	AMELX	Q99217	191 aa		10.76	□□□□□ -0.69
SMTN-223	ENST00000619644	KLLN	B2CW77	178 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	ZNRF2	Q8NHG8	242 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	DCANP1	Q8TF63	244 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	NTN5	Q8WTR8	489 aa	Predicted RBP	10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	FAM19A4	Q96LR4	140 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	KIF25-AS1	Q9Y6Z4	181 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	C2CD3	Q4AC94	2353 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	ANKRD17	O75179	2603 aa	Known RBP	10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	CCDC179	H3BU77	68 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	PTPN13	Q12923	2485 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	TRAV2	A0A0B4J234	112 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644		J3QQQ9	107 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	IGHV3-33	P01772	117 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	PRM2	P04554	102 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	MED14OS	P0DP75	135 aa		10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	POLR2K	P53803	58 aa	Known RBP	10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	RNASE13	Q5GAN3	156 aa	Known RBP	10.75	□□□□□ -0.69
SMTN-223	ENST00000619644	ADARB2-AS1	A8MUL3	147 aa		10.74	□□□□□ -0.69
SMTN-223	ENST00000619644	KNCN	A6PVL3	124 aa		10.74	□□□□□ -0.69
SMTN-223	ENST00000619644		M0QXV9	152 aa		10.74	□□□□□ -0.69
SMTN-223	ENST00000619644	ABCA12	Q86UK0	2595 aa		10.74	□□□□□ -0.69
SMTN-223	ENST00000619644	LRRK2	Q5S007	2527 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644		H3BUA1	57 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644		Q1RN00	199 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	DEFB112	Q30KQ8	113 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	GAGE12J	A6NER3	117 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	GAGE7	O76087	117 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	ELANE	P08246	267 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	GAGE12F	P0CL80	117 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	GAGE12G	P0CL81	117 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	GAGE12I	P0CL82	117 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	GAGE4	Q13068	117 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	TTC32	Q5I0X7	151 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	TMEM263	Q8WUH6	116 aa	Known RBP	10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	IGLV1-40	P01703	118 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	KHDC1L	Q5JSQ8	128 aa		10.73	□□□□□ -0.69
SMTN-223	ENST00000619644	SON	P18583	2426 aa	Known RBP	10.73	□□□□□ -0.69
SMTN-223	ENST00000619644		P0DMU3	169 aa		10.72	□□□□□ -0.69
SMTN-223	ENST00000619644	FAM231A	P0DMU4	169 aa		10.72	□□□□□ -0.69
SMTN-223	ENST00000619644	FAM231C	P0DMU5	169 aa		10.72	□□□□□ -0.69
SMTN-223	ENST00000619644	IFITM1	P13164	125 aa		10.72	□□□□□ -0.69
SMTN-223	ENST00000619644	BEX4	Q9NWD9	120 aa	Predicted RBP	10.72	□□□□□ -0.69
SMTN-223	ENST00000619644	IGHV3-16	A0A0C4DH30	117 aa		10.72	□□□□□ -0.69
SMTN-223	ENST00000619644	HIST2H2BD	Q6DRA6	164 aa		10.72	□□□□□ -0.69
SMTN-223	ENST00000619644	IGHV4OR15-8	A0A075B7B6	117 aa		10.71	□□□□□ -0.69
SMTN-223	ENST00000619644	IGHV1OR15-1	A0A075B7D0	117 aa		10.71	□□□□□ -0.69
SMTN-223	ENST00000619644		A0A087WW49	117 aa		10.71	□□□□□ -0.69
SMTN-223	ENST00000619644	TMEM141	Q96I45	108 aa		10.71	□□□□□ -0.69
SMTN-223	ENST00000619644	SPX	Q9BT56	116 aa		10.71	□□□□□ -0.69
SMTN-223	ENST00000619644	DOPEY1	Q5JWR5	2465 aa		10.71	□□□□□ -0.69
SMTN-223	ENST00000619644		A0A0J9YXV3	536 aa		10.71	□□□□□ -0.69
SMTN-223	ENST00000619644	TEX49	A0A1B0GTD5	131 aa		10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms