RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, human

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-215	ENST00000619138	TOMM6	Q96B49	74 aa		10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	CHCHD5	Q9BSY4	110 aa		10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	ZNF580	Q9UK33	172 aa		10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	IGHV7-81	A0A0B4J1V7	117 aa		10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	RBAKDN	A6NC62	111 aa		10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	C9orf153	Q5TBE3	101 aa		10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	MUSTN1	Q8IVN3	82 aa		10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	CRYBG3	Q68DQ2	2970 aa		10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	TNFRSF13B	O14836	293 aa	Predicted RBP	10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	ZFP36	P26651	326 aa	Known RBP	10.39	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138		Q6ZSV7	163 aa		10.38	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	ANKRD17	O75179	2603 aa	Known RBP	10.38	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	TRBV7-9	A0A0J9YWB2	115 aa		10.38	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	PIMREG	Q9BSJ6	248 aa		10.38	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	VCX2	Q9H322	139 aa		10.38	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	TRAV21	A0A0B4J279	112 aa		10.38	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	SDHAF1	A6NFY7	115 aa		10.37	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138		Q8N1Y9	231 aa		10.37	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	KNCN	A6PVL3	124 aa		10.37	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	PMVK	Q15126	192 aa		10.37	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	TRAV12-2	A0A075B6T6	113 aa		10.37	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	NDUFV3	P56181	108 aa	Known RBP	10.37	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	C20orf173	Q96LM9	149 aa		10.37	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	ELANE	P08246	267 aa		10.36	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	TRAV12-1	A0A0B4J245	112 aa		10.36	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	UBE2D1	P51668	147 aa		10.36	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	EEF1AKMT3	Q96AZ1	226 aa		10.36	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138		A0A0J9YXV3	536 aa		10.36	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	CLEC2B	Q92478	149 aa		10.36	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	TRBV12-3	P01733	135 aa		10.35	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	RNF5	Q99942	180 aa		10.35	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	CNFN	Q9BYD5	112 aa		10.35	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	ATP6V0E2	Q8NHE4	81 aa		10.35	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	TOMM7	Q9P0U1	55 aa		10.35	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138		A8MZ25	164 aa		10.35	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	ZNF876P	Q49A33	203 aa		10.35	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	IGHV4-61	A0A0C4DH41	118 aa		10.34	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138		H3BMM0	161 aa		10.34	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138		M0R2P5	195 aa		10.34	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.34	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	UBE2W	Q96B02	151 aa		10.34	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	CFAP161	Q6P656	301 aa		10.34	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	UNQ9165/PRO28630	Q6UXU0	137 aa		10.34	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	IGHV4-30-2	A0A087WSY4	118 aa		10.34	□□□□□ -0.75
CNTNAP3B-215	ENST00000619138	IGHV3-30	P01768	117 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	IGHV3-30-5	P0DP03	117 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	UBE2D3	P61077	147 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	UBE2D2	P62837	147 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	ZNRF2	Q8NHG8	242 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	CCDC140	Q96MF4	163 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	KLK9	Q9UKQ9	250 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	LY6L	H3BQJ8	138 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	LINC01620	Q4KN68	170 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	OR13C6P	Q8NH95	151 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	HIST2H2BD	Q6DRA6	164 aa		10.33	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	SUMO4	Q6EEV6	95 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	GAGE2A	Q6NT46	116 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	HELZ2	Q9BYK8	2649 aa	Known RBP	10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	FAM236A	A0A1B0GUQ0	79 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	FAM236B	A0A1B0GV22	79 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138		A0A1W2PRX2	142 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	CLPSL1	A2RUU4	121 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	CRYGD	P07320	174 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	KRTAP10-9	P60411	292 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	ATXN8	Q156A1	80 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	ZFAND3	Q9H8U3	227 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	TRAV41	A0A0B4J266	112 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138		Q8N9W7	124 aa		10.32	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	CD28	P10747	220 aa		10.31	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	ID1	P41134	155 aa		10.31	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	RPL32	P62910	135 aa	Known RBP	10.31	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	NPB	Q8NG41	125 aa		10.31	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	SAA4	P35542	130 aa		10.31	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	HIST1H4A	P62805	103 aa	Known RBP	10.31	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	VCY	O14598	125 aa		10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	TSHB	P01222	138 aa		10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	HOXD3	P31249	432 aa	Predicted RBP	10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	LMO4	P61968	165 aa		10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	TRAV13-1	A0A0B4J241	112 aa		10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	SLC25A29	Q8N8R3	303 aa		10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	IGLV4-69	A0A075B6H9	119 aa		10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	IGHV3-38	A0A0C4DH36	116 aa		10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	IGHV3-33	P01772	117 aa		10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	SYNJ2BP	P57105	145 aa		10.3	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138		J3QKU1	62 aa		10.29	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138		M0R1W7	72 aa		10.29	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	PPP1R17	O96001	155 aa		10.29	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	PAPPA-AS1	Q5QFB9	102 aa		10.29	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	CELSR1	Q9NYQ6	3014 aa		10.29	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	NHLRC4	P0CG21	123 aa	Predicted RBP	10.29	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	TEP1	Q99973	2627 aa	Known RBP	10.28	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	TRIAP1	O43715	76 aa		10.28	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	ZFAND2A	Q8N6M9	145 aa		10.28	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	UBE2E1	P51965	193 aa		10.28	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	LY6G5B	Q8NDX9	201 aa		10.28	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.28	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	MAST4	O15021	2626 aa		10.28	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	RNF223	E7ERA6	249 aa		10.28	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	EDN2	P20800	178 aa		10.28	□□□□□ -0.76
CNTNAP3B-215	ENST00000619138	C10orf105	Q8TEF2	133 aa		10.28	□□□□□ -0.76

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