RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SCGB3A1Q96QR1 104 aa9.16□□□□□ -0.94
CIITA-212ENST00000618207 IGHV3OR16-12A0A075B7B8 117 aa9.16□□□□□ -0.94
CIITA-212ENST00000618207 LINC00315P59091 139 aa9.16□□□□□ -0.94
CIITA-212ENST00000618207 ZC2HC1BQ5TFG8 222 aa9.16□□□□□ -0.94
CIITA-212ENST00000618207 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
CIITA-212ENST00000618207 RBMY1BA6NDE4 496 aaKnown RBP9.15□□□□□ -0.94
CIITA-212ENST00000618207 RBMY1EA6NEQ0 496 aaKnown RBP9.15□□□□□ -0.94
CIITA-212ENST00000618207 RBMY1DP0C7P1 496 aaKnown RBP9.15□□□□□ -0.94
CIITA-212ENST00000618207 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
CIITA-212ENST00000618207 LINC01546A6NGU7 62 aa9.15□□□□□ -0.94
CIITA-212ENST00000618207 IGKCP01834 107 aa9.15□□□□□ -0.94
CIITA-212ENST00000618207 MED14OSP0DP75 135 aa9.15□□□□□ -0.94
CIITA-212ENST00000618207 EMP1P54849 157 aa9.15□□□□□ -0.94
CIITA-212ENST00000618207 GAGE5Q13069 117 aa9.15□□□□□ -0.94
CIITA-212ENST00000618207 GAGE6Q13070 117 aa9.15□□□□□ -0.94
CIITA-212ENST00000618207 C2orf66Q6UXQ4 117 aa9.15□□□□□ -0.94
CIITA-212ENST00000618207 C2orf91Q6ZV80 131 aa9.15□□□□□ -0.94
CIITA-212ENST00000618207 H3BMM0 161 aa9.14□□□□□ -0.95
CIITA-212ENST00000618207 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.14□□□□□ -0.95
CIITA-212ENST00000618207 ATP5LO75964 103 aa9.14□□□□□ -0.95
CIITA-212ENST00000618207 DEFB114Q30KQ6 69 aa9.14□□□□□ -0.95
CIITA-212ENST00000618207 BVES-AS1Q5T3Y7 98 aa9.14□□□□□ -0.95
CIITA-212ENST00000618207 SPATA25Q9BR10 227 aa9.14□□□□□ -0.95
CIITA-212ENST00000618207 RPL39P62891 51 aaKnown RBP9.14□□□□□ -0.95
CIITA-212ENST00000618207 MAP6D1Q9H9H5 199 aa9.14□□□□□ -0.95
CIITA-212ENST00000618207 TSSC4Q9Y5U2 329 aaPredicted RBP9.14□□□□□ -0.95
CIITA-212ENST00000618207 CCL24O00175 119 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 PROK1P58294 105 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 HHLA3Q9XRX5 114 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 OTOGQ6ZRI0 2925 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 SDHAF1A6NFY7 115 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 FGF6P10767 208 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 ORMDL2Q53FV1 153 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 LINC01006Q8NI28 216 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 C9orf85Q96MD7 179 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 XCL2Q9UBD3 114 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 DPM2O94777 84 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 HLA-DRB4P13762 266 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 C12orf54Q6X4T0 127 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 C20orf78Q9BR46 151 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 HLA-DRB4X5D2U9 266 aa9.13□□□□□ -0.95
CIITA-212ENST00000618207 TRAV25A0A0B4J276 109 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 P0DMU3 169 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 FAM231AP0DMU4 169 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 FAM231CP0DMU5 169 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 NSUN5P1Q3KNT7 163 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 SYT8Q8NBV8 401 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 ODF3Q96PU9 254 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 NXPH4O95158 308 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 CRYGDP07320 174 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 TMEM86BQ8N661 226 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 LINC01587Q99440 93 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 ERG28Q9UKR5 140 aa9.12□□□□□ -0.95
CIITA-212ENST00000618207 M0QXV9 152 aa9.11□□□□□ -0.95
CIITA-212ENST00000618207 RNF183Q96D59 192 aa9.11□□□□□ -0.95
CIITA-212ENST00000618207 TP53TG1Q9Y2A0 90 aa9.11□□□□□ -0.95
CIITA-212ENST00000618207 C5orf47Q569G3 176 aa9.11□□□□□ -0.95
CIITA-212ENST00000618207 ZNF418Q8TF45 676 aaPredicted RBP9.11□□□□□ -0.95
CIITA-212ENST00000618207 K7EP34 96 aa9.1□□□□□ -0.95
CIITA-212ENST00000618207 RPL24P83731 157 aaKnown RBP9.1□□□□□ -0.95
CIITA-212ENST00000618207 TOMM6Q96B49 74 aa9.1□□□□□ -0.95
CIITA-212ENST00000618207 KIR2DL4Q99706 377 aa9.1□□□□□ -0.95
CIITA-212ENST00000618207 NAA38Q9BRA0 125 aaKnown RBP9.1□□□□□ -0.95
CIITA-212ENST00000618207 Q9UF83 564 aa9.1□□□□□ -0.95
CIITA-212ENST00000618207 A0A087WX48 190 aa9.1□□□□□ -0.95
CIITA-212ENST00000618207 TEX48A0A1B0GUV7 120 aa9.1□□□□□ -0.95
CIITA-212ENST00000618207 K7EMI3 77 aa9.1□□□□□ -0.95
CIITA-212ENST00000618207 WFDC10AQ9H1F0 79 aa9.1□□□□□ -0.95
CIITA-212ENST00000618207 J3QR89 54 aa9.09□□□□□ -0.95
CIITA-212ENST00000618207 ODF3L2Q3SX64 289 aa9.09□□□□□ -0.95
CIITA-212ENST00000618207 TEX29Q8N6K0 151 aa9.09□□□□□ -0.95
CIITA-212ENST00000618207 TRGV11A0A075B6L2 103 aa9.09□□□□□ -0.95
CIITA-212ENST00000618207 TMEM97Q5BJF2 176 aa9.09□□□□□ -0.95
CIITA-212ENST00000618207 MORN3Q6PF18 240 aaPredicted RBP9.09□□□□□ -0.95
CIITA-212ENST00000618207 ZFP2Q6ZN57 461 aa9.09□□□□□ -0.95
CIITA-212ENST00000618207 BAALCQ8WXS3 180 aa9.09□□□□□ -0.95
CIITA-212ENST00000618207 OPRPNQ99935 248 aaPredicted RBP9.09□□□□□ -0.95
CIITA-212ENST00000618207 ZMAT4Q9H898 229 aa9.09□□□□□ -0.95
CIITA-212ENST00000618207 B5MCH6 92 aa9.09□□□□□ -0.96
CIITA-212ENST00000618207 M0QY20 66 aa9.09□□□□□ -0.96
CIITA-212ENST00000618207 POLR2KP53803 58 aaKnown RBP9.09□□□□□ -0.96
CIITA-212ENST00000618207 OR5A1Q8NGJ0 315 aa9.09□□□□□ -0.96
CIITA-212ENST00000618207 CYSLTR1Q9Y271 337 aa9.08□□□□□ -0.96
CIITA-212ENST00000618207 PRSS29PA6NIE9 313 aa9.08□□□□□ -0.96
CIITA-212ENST00000618207 VCYO14598 125 aa9.08□□□□□ -0.96
CIITA-212ENST00000618207 PPP1R17O96001 155 aa9.08□□□□□ -0.96
CIITA-212ENST00000618207 STHQ8IWL8 128 aa9.08□□□□□ -0.96
CIITA-212ENST00000618207 RAB37Q96AX2 223 aa9.08□□□□□ -0.96
CIITA-212ENST00000618207 F8VRH5 84 aa9.07□□□□□ -0.96
CIITA-212ENST00000618207 H7C1H1 209 aa9.07□□□□□ -0.96
CIITA-212ENST00000618207 WIPF1O43516 503 aa9.07□□□□□ -0.96
CIITA-212ENST00000618207 MAPKAPK5-AS1Q8N8E1 139 aa9.07□□□□□ -0.96
CIITA-212ENST00000618207 ANK3Q12955 4377 aaKnown RBP9.07□□□□□ -0.96
CIITA-212ENST00000618207 NEXN-AS1Q8NBZ9 246 aa9.07□□□□□ -0.96
CIITA-212ENST00000618207 SPAG8Q99932 426 aaPredicted RBP9.07□□□□□ -0.96
CIITA-212ENST00000618207 NBEAL2Q6ZNJ1 2754 aa9.07□□□□□ -0.96
CIITA-212ENST00000618207 FLNBO75369 2602 aaKnown RBP9.06□□□□□ -0.96
CIITA-212ENST00000618207 VWFP04275 2813 aa9.06□□□□□ -0.96
CIITA-212ENST00000618207 GCSHP23434 173 aa9.06□□□□□ -0.96
CIITA-212ENST00000618207 POM121L12Q8N7R1 296 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms