RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 Q6ZWC4 215 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 LINC00518Q8N0U6 118 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 C12orf57Q99622 126 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 OVOL2Q9BRP0 275 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 JPT2Q9H910 190 aa12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
TRAPPC3-210ENST00000617904 TRGV2A0A075B6R0 118 aa12.1□□□□□ -0.47
TRAPPC3-210ENST00000617904 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
TRAPPC3-210ENST00000617904 A8MZ25 164 aa12.1□□□□□ -0.47
TRAPPC3-210ENST00000617904 LINC00315P59091 139 aa12.1□□□□□ -0.47
TRAPPC3-210ENST00000617904 KRTDAPP60985 99 aa12.1□□□□□ -0.47
TRAPPC3-210ENST00000617904 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
TRAPPC3-210ENST00000617904 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
TRAPPC3-210ENST00000617904 SORL1Q92673 2214 aa12.09□□□□□ -0.47
TRAPPC3-210ENST00000617904 LINC01546A6NGU7 62 aa12.09□□□□□ -0.47
TRAPPC3-210ENST00000617904 GATA1P15976 413 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-210ENST00000617904 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-210ENST00000617904 FCER1GP30273 86 aa12.09□□□□□ -0.47
TRAPPC3-210ENST00000617904 WWC2-AS2Q96NR7 200 aa12.09□□□□□ -0.47
TRAPPC3-210ENST00000617904 RYR3Q15413 4870 aa12.08□□□□□ -0.48
TRAPPC3-210ENST00000617904 TEX48A0A1B0GUV7 120 aa12.08□□□□□ -0.48
TRAPPC3-210ENST00000617904 MIFP14174 115 aa12.08□□□□□ -0.48
TRAPPC3-210ENST00000617904 URB1-AS1Q96HZ7 61 aa12.08□□□□□ -0.48
TRAPPC3-210ENST00000617904 M0QY20 66 aa12.07□□□□□ -0.48
TRAPPC3-210ENST00000617904 NUDT3O95989 172 aa12.07□□□□□ -0.48
TRAPPC3-210ENST00000617904 TMEM70Q9BUB7 260 aa12.07□□□□□ -0.48
TRAPPC3-210ENST00000617904 LYRM9A8MSI8 78 aa12.06□□□□□ -0.48
TRAPPC3-210ENST00000617904 ATP5LO75964 103 aa12.06□□□□□ -0.48
TRAPPC3-210ENST00000617904 IGHV3-53P01767 116 aa12.06□□□□□ -0.48
TRAPPC3-210ENST00000617904 DEFB135Q30KP9 77 aa12.06□□□□□ -0.48
TRAPPC3-210ENST00000617904 OR11H2Q8NH07 326 aa12.06□□□□□ -0.48
TRAPPC3-210ENST00000617904 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
TRAPPC3-210ENST00000617904 TP53TG1Q9Y2A0 90 aa12.06□□□□□ -0.48
TRAPPC3-210ENST00000617904 GAGE12BA1L429 117 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 SDHAF1A6NFY7 115 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 GAGE7O76087 117 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 PRM2P04554 102 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 PMCHL1Q16048 86 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 RNF183Q96D59 192 aa12.05□□□□□ -0.48
TRAPPC3-210ENST00000617904 IGHV3-73A0A0B4J1V6 119 aa12.04□□□□□ -0.48
TRAPPC3-210ENST00000617904 TRBV10-1A0A0K0K1A3 114 aa12.04□□□□□ -0.48
TRAPPC3-210ENST00000617904 I3L3M4 83 aa12.04□□□□□ -0.48
TRAPPC3-210ENST00000617904 EMP1P54849 157 aa12.04□□□□□ -0.48
TRAPPC3-210ENST00000617904 PET117Q6UWS5 81 aa12.04□□□□□ -0.48
TRAPPC3-210ENST00000617904 Q6ZTI0 123 aa12.04□□□□□ -0.48
TRAPPC3-210ENST00000617904 IGLV2-18A0A075B6J9 118 aa12.03□□□□□ -0.48
TRAPPC3-210ENST00000617904 TRGV4A0A0C4DH28 118 aa12.03□□□□□ -0.48
TRAPPC3-210ENST00000617904 TRBV27A0A0K0K1C4 114 aa12.03□□□□□ -0.48
TRAPPC3-210ENST00000617904 GAS8-AS1O95177 125 aa12.03□□□□□ -0.48
TRAPPC3-210ENST00000617904 RPL36AP83881 106 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-210ENST00000617904 RPL36ALQ969Q0 106 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-210ENST00000617904 MUC4Q99102 2169 aa12.03□□□□□ -0.48
TRAPPC3-210ENST00000617904 TENM3Q9P273 2699 aa12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 C3orf79P0CE67 100 aa12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 NHLRC4P0CG21 123 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 POLR2KP53803 58 aaKnown RBP12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 RHOHQ15669 191 aa12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 C18orf15Q96N68 181 aa12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 PRADC1Q9BSG0 188 aa12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 CYSLTR1Q9Y271 337 aa12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 X6R8D5 127 aa12.02□□□□□ -0.49
TRAPPC3-210ENST00000617904 K7EQD1 137 aa12.01□□□□□ -0.49
TRAPPC3-210ENST00000617904 SMAGPQ0VAQ4 97 aa12.01□□□□□ -0.49
TRAPPC3-210ENST00000617904 IFI27L1Q96BM0 104 aa12.01□□□□□ -0.49
TRAPPC3-210ENST00000617904 TRBV6-4A0A1B0GX49 114 aa12□□□□□ -0.49
TRAPPC3-210ENST00000617904 PLAC8L1A1L4L8 177 aa12□□□□□ -0.49
TRAPPC3-210ENST00000617904 SYS1-DBNDD2H3BUS1 97 aa12□□□□□ -0.49
TRAPPC3-210ENST00000617904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC3-210ENST00000617904 SPART-AS1P0CW21 52 aa11.99□□□□□ -0.49
TRAPPC3-210ENST00000617904 Q6ZN92 141 aa11.99□□□□□ -0.49
TRAPPC3-210ENST00000617904 ZNF479Q96JC4 524 aa11.99□□□□□ -0.49
TRAPPC3-210ENST00000617904 HSBP1L1C9JCN9 74 aa11.98□□□□□ -0.49
TRAPPC3-210ENST00000617904 DEFB130BP0DP73 79 aa11.98□□□□□ -0.49
TRAPPC3-210ENST00000617904 DEFB130AP0DP74 79 aa11.98□□□□□ -0.49
TRAPPC3-210ENST00000617904 COTL1Q14019 142 aa11.98□□□□□ -0.49
TRAPPC3-210ENST00000617904 SPATA12Q7Z6I5 190 aa11.98□□□□□ -0.49
TRAPPC3-210ENST00000617904 TRBV7-3A0A075B6L6 115 aa11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 IGHV4-28A0A0C4DH34 117 aa11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 PRSS1P07477 247 aa11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 DAD1P61803 113 aa11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 C2orf66Q6UXQ4 117 aa11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 DAZ4Q86SG3 579 aaKnown RBP11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 SCGB3A1Q96QR1 104 aa11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 VAMP8Q9BV40 100 aa11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 DAZ3Q9NR90 486 aaKnown RBP11.97□□□□□ -0.49
TRAPPC3-210ENST00000617904 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
TRAPPC3-210ENST00000617904 PAPPA-AS1Q5QFB9 102 aa11.96□□□□□ -0.49
TRAPPC3-210ENST00000617904 FAM222AQ5U5X8 452 aa11.96□□□□□ -0.49
TRAPPC3-210ENST00000617904 LINC00612Q8N6U2 182 aa11.96□□□□□ -0.49
TRAPPC3-210ENST00000617904 NEXN-AS1Q8NBZ9 246 aa11.96□□□□□ -0.49
TRAPPC3-210ENST00000617904 TMEM141Q96I45 108 aa11.96□□□□□ -0.49
TRAPPC3-210ENST00000617904 TSTD3H0UI37 97 aa11.95□□□□□ -0.5
TRAPPC3-210ENST00000617904 H0Y8G0 127 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms