RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 AZU1P20160 251 aa12.61□□□□□ -0.39
PCDHGC3-205ENST00000617641 RPL32P62910 135 aaKnown RBP12.61□□□□□ -0.39
PCDHGC3-205ENST00000617641 ODF1Q14990 250 aa12.61□□□□□ -0.39
PCDHGC3-205ENST00000617641 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
PCDHGC3-205ENST00000617641 SDHAF1A6NFY7 115 aa12.61□□□□□ -0.39
PCDHGC3-205ENST00000617641 TOMM6Q96B49 74 aa12.61□□□□□ -0.39
PCDHGC3-205ENST00000617641 JMJD1CQ15652 2540 aa12.6□□□□□ -0.39
PCDHGC3-205ENST00000617641 TRBV6-5A0A0K0K1A5 114 aa12.6□□□□□ -0.39
PCDHGC3-205ENST00000617641 K7EP13 123 aa12.6□□□□□ -0.39
PCDHGC3-205ENST00000617641 STPG4Q8N801 248 aa12.59□□□□□ -0.39
PCDHGC3-205ENST00000617641 FAM110AQ9BQ89 295 aa12.59□□□□□ -0.39
PCDHGC3-205ENST00000617641 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
PCDHGC3-205ENST00000617641 VCYO14598 125 aa12.59□□□□□ -0.39
PCDHGC3-205ENST00000617641 RPL35AP18077 110 aaKnown RBP12.59□□□□□ -0.39
PCDHGC3-205ENST00000617641 C2orf66Q6UXQ4 117 aa12.59□□□□□ -0.39
PCDHGC3-205ENST00000617641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
PCDHGC3-205ENST00000617641 SCGB3A1Q96QR1 104 aa12.59□□□□□ -0.39
PCDHGC3-205ENST00000617641 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.58□□□□□ -0.4
PCDHGC3-205ENST00000617641 GIG44P09565 113 aaPredicted RBP12.58□□□□□ -0.4
PCDHGC3-205ENST00000617641 TCTAP57738 103 aa12.58□□□□□ -0.4
PCDHGC3-205ENST00000617641 SPATA3Q8NHX4 192 aa12.58□□□□□ -0.4
PCDHGC3-205ENST00000617641 A8MWV9 139 aa12.57□□□□□ -0.4
PCDHGC3-205ENST00000617641 SPXQ9BT56 116 aa12.57□□□□□ -0.4
PCDHGC3-205ENST00000617641 TRBV27A0A0K0K1C4 114 aa12.57□□□□□ -0.4
PCDHGC3-205ENST00000617641 UFSP1Q6NVU6 142 aa12.57□□□□□ -0.4
PCDHGC3-205ENST00000617641 ZFP2Q6ZN57 461 aa12.57□□□□□ -0.4
PCDHGC3-205ENST00000617641 PTH2Q96A98 100 aa12.57□□□□□ -0.4
PCDHGC3-205ENST00000617641 KIR2DL4Q99706 377 aa12.57□□□□□ -0.4
PCDHGC3-205ENST00000617641 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
PCDHGC3-205ENST00000617641 P0DMU3 169 aa12.56□□□□□ -0.4
PCDHGC3-205ENST00000617641 FAM231AP0DMU4 169 aa12.56□□□□□ -0.4
PCDHGC3-205ENST00000617641 FAM231CP0DMU5 169 aa12.56□□□□□ -0.4
PCDHGC3-205ENST00000617641 BATFQ16520 125 aa12.56□□□□□ -0.4
PCDHGC3-205ENST00000617641 PIK3CD-AS1Q5SR53 167 aa12.56□□□□□ -0.4
PCDHGC3-205ENST00000617641 CFAP126Q5VTH2 177 aa12.56□□□□□ -0.4
PCDHGC3-205ENST00000617641 SLC25A34Q6PIV7 304 aa12.56□□□□□ -0.4
PCDHGC3-205ENST00000617641 ZMAT4Q9H898 229 aa12.56□□□□□ -0.4
PCDHGC3-205ENST00000617641 RNF151Q2KHN1 245 aa12.55□□□□□ -0.4
PCDHGC3-205ENST00000617641 MRPL35Q9NZE8 188 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-205ENST00000617641 MRPS16Q9Y3D3 137 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-205ENST00000617641 TENM1Q9UKZ4 2725 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 A0A087WX48 190 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 IGKCP01834 107 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 Q6ZSN1 163 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 CYSLTR1Q9Y271 337 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 TP53TG1Q9Y2A0 90 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 DPM2O94777 84 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 COX8AP10176 69 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 RPL39P62891 51 aaKnown RBP12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 IL17DQ8TAD2 202 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 VWFP04275 2813 aa12.54□□□□□ -0.4
PCDHGC3-205ENST00000617641 H7C1H1 209 aa12.53□□□□□ -0.4
PCDHGC3-205ENST00000617641 ERASQ7Z444 233 aa12.53□□□□□ -0.4
PCDHGC3-205ENST00000617641 EDA2RQ9HAV5 297 aa12.53□□□□□ -0.4
PCDHGC3-205ENST00000617641 FLNBO75369 2602 aaKnown RBP12.53□□□□□ -0.4
PCDHGC3-205ENST00000617641 PTTG1IPP53801 180 aa12.53□□□□□ -0.4
PCDHGC3-205ENST00000617641 Q9UF83 564 aa12.53□□□□□ -0.4
PCDHGC3-205ENST00000617641 HHLA3Q9XRX5 114 aa12.53□□□□□ -0.4
PCDHGC3-205ENST00000617641 BAALCQ8WXS3 180 aa12.52□□□□□ -0.41
PCDHGC3-205ENST00000617641 CITED1Q99966 193 aa12.52□□□□□ -0.41
PCDHGC3-205ENST00000617641 RS1O15537 224 aa12.51□□□□□ -0.41
PCDHGC3-205ENST00000617641 TSHBP01222 138 aa12.51□□□□□ -0.41
PCDHGC3-205ENST00000617641 NEXN-AS1Q8NBZ9 246 aa12.51□□□□□ -0.41
PCDHGC3-205ENST00000617641 TMEM263Q8WUH6 116 aaKnown RBP12.51□□□□□ -0.41
PCDHGC3-205ENST00000617641 TRGV1A0A0A0MS02 117 aa12.51□□□□□ -0.41
PCDHGC3-205ENST00000617641 TRAV12-1A0A0B4J245 112 aa12.51□□□□□ -0.41
PCDHGC3-205ENST00000617641 RIPPLY3P57055 190 aa12.51□□□□□ -0.41
PCDHGC3-205ENST00000617641 F8P00451 2351 aa12.51□□□□□ -0.41
PCDHGC3-205ENST00000617641 I3L3M4 83 aa12.5□□□□□ -0.41
PCDHGC3-205ENST00000617641 RHODO00212 210 aa12.5□□□□□ -0.41
PCDHGC3-205ENST00000617641 FGF6P10767 208 aa12.5□□□□□ -0.41
PCDHGC3-205ENST00000617641 HINT1P49773 126 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-205ENST00000617641 CCL25O15444 150 aa12.5□□□□□ -0.41
PCDHGC3-205ENST00000617641 NMUP48645 174 aa12.5□□□□□ -0.41
PCDHGC3-205ENST00000617641 CSNK1G2-AS1Q8NCQ2 148 aa12.5□□□□□ -0.41
PCDHGC3-205ENST00000617641 VPS25Q9BRG1 176 aa12.5□□□□□ -0.41
PCDHGC3-205ENST00000617641 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
PCDHGC3-205ENST00000617641 IGIPA6NJ69 53 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 C1QTNF4Q9BXJ3 329 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 F8VRH5 84 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 RHOHQ15669 191 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 COL5A1-AS1Q5SY13 56 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 C9orf66Q5T8R8 295 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 ZC2HC1BQ5TFG8 222 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 Q6ZTI0 123 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 GTSCR1Q86UQ5 136 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 TNFRSF18Q9Y5U5 241 aa12.49□□□□□ -0.41
PCDHGC3-205ENST00000617641 INSL3P51460 131 aa12.48□□□□□ -0.41
PCDHGC3-205ENST00000617641 IGKV2D-26A0A0A0MRZ7 120 aa12.48□□□□□ -0.41
PCDHGC3-205ENST00000617641 PRSS29PA6NIE9 313 aa12.48□□□□□ -0.41
PCDHGC3-205ENST00000617641 IGHV3-53P01767 116 aa12.48□□□□□ -0.41
PCDHGC3-205ENST00000617641 PLNP26678 52 aa12.48□□□□□ -0.41
PCDHGC3-205ENST00000617641 PCP2Q8IVA1 136 aa12.48□□□□□ -0.41
PCDHGC3-205ENST00000617641 NOP10Q9NPE3 64 aaKnown RBP12.48□□□□□ -0.41
PCDHGC3-205ENST00000617641 LINC01549A6NIU2 74 aa12.47□□□□□ -0.41
PCDHGC3-205ENST00000617641 C2orf91Q6ZV80 131 aa12.47□□□□□ -0.41
PCDHGC3-205ENST00000617641 OR4C5Q8NGB2 326 aa12.47□□□□□ -0.41
PCDHGC3-205ENST00000617641 PLAC8L1A1L4L8 177 aa12.46□□□□□ -0.41
PCDHGC3-205ENST00000617641 ATRQ13535 2644 aa12.46□□□□□ -0.41
PCDHGC3-205ENST00000617641 BOD1L2Q8IYS8 172 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms