RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 GAGE2EQ4V326 116 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 C10orf126Q8N4M7 172 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 PIFOQ8TCI5 191 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 GAGE2DQ9UEU5 116 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 NDUFA12Q9UI09 145 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.43□□□□□ -0.9
MSH6-213ENST00000614496 TRAV13-1A0A0B4J241 112 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 IGKV2-29A2NJV5 120 aaPredicted RBP9.43□□□□□ -0.9
MSH6-213ENST00000614496 UBE2L6O14933 153 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 P0DMU3 169 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 FAM231AP0DMU4 169 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 FAM231CP0DMU5 169 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 ATXN8Q156A1 80 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 NDUFA11Q86Y39 141 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 TCL1BO95988 128 aa9.42□□□□□ -0.9
MSH6-213ENST00000614496 XCL2Q9UBD3 114 aa9.42□□□□□ -0.9
MSH6-213ENST00000614496 TRAV8-3A0A0A6YYJ7 113 aa9.42□□□□□ -0.9
MSH6-213ENST00000614496 TNRC18O15417 2968 aaPredicted RBP9.42□□□□□ -0.9
MSH6-213ENST00000614496 COX6B1P14854 86 aa9.42□□□□□ -0.9
MSH6-213ENST00000614496 NOTCH2Q04721 2471 aa9.42□□□□□ -0.9
MSH6-213ENST00000614496 TRGV1A0A0A0MS02 117 aa9.42□□□□□ -0.9
MSH6-213ENST00000614496 A0A0J9YY99 117 aa9.41□□□□□ -0.9
MSH6-213ENST00000614496 U3KQE9 123 aa9.41□□□□□ -0.9
MSH6-213ENST00000614496 ANKRD29Q8N6D5 301 aa9.41□□□□□ -0.9
MSH6-213ENST00000614496 IGHV4-4A0A075B6R2 117 aa9.41□□□□□ -0.9
MSH6-213ENST00000614496 H3BUA1 57 aa9.41□□□□□ -0.9
MSH6-213ENST00000614496 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
MSH6-213ENST00000614496 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
MSH6-213ENST00000614496 PSMG3-AS1Q96PY0 264 aa9.41□□□□□ -0.9
MSH6-213ENST00000614496 DCHS1Q96JQ0 3298 aa9.4□□□□□ -0.9
MSH6-213ENST00000614496 RNF223E7ERA6 249 aa9.4□□□□□ -0.9
MSH6-213ENST00000614496 TEN1Q86WV5 123 aa9.4□□□□□ -0.9
MSH6-213ENST00000614496 TIMM17AQ99595 171 aa9.4□□□□□ -0.9
MSH6-213ENST00000614496 MED14OSP0DP75 135 aa9.4□□□□□ -0.9
MSH6-213ENST00000614496 DAND5Q8N907 189 aa9.4□□□□□ -0.9
MSH6-213ENST00000614496 C10orf105Q8TEF2 133 aa9.4□□□□□ -0.9
MSH6-213ENST00000614496 A6NDX4 124 aa9.39□□□□□ -0.91
MSH6-213ENST00000614496 LEPROTO15243 131 aa9.39□□□□□ -0.91
MSH6-213ENST00000614496 PRM2P04554 102 aa9.39□□□□□ -0.91
MSH6-213ENST00000614496 STHQ8IWL8 128 aa9.39□□□□□ -0.91
MSH6-213ENST00000614496 RHOHQ15669 191 aa9.39□□□□□ -0.91
MSH6-213ENST00000614496 SLURP1P55000 103 aa9.39□□□□□ -0.91
MSH6-213ENST00000614496 PEMTQ9UBM1 199 aa9.39□□□□□ -0.91
MSH6-213ENST00000614496 IGHV4OR15-8A0A075B7B6 117 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 A0A087WW49 117 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 A0A0J9YX75 114 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 MT-ATP8P03928 68 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 HIST2H2BDQ6DRA6 164 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 APRG1Q8IVJ8 170 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 ZFYVE26Q68DK2 2539 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 TRGV2A0A075B6R0 118 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 MORN3Q6PF18 240 aaPredicted RBP9.38□□□□□ -0.91
MSH6-213ENST00000614496 PROK1P58294 105 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 C20orf203Q8NBC4 194 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 ZNRF2Q8NHG8 242 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 ZFHX4Q86UP3 3567 aa9.38□□□□□ -0.91
MSH6-213ENST00000614496 RHODO00212 210 aa9.37□□□□□ -0.91
MSH6-213ENST00000614496 YAE1D1Q9NRH1 226 aa9.37□□□□□ -0.91
MSH6-213ENST00000614496 LINC01356Q8N9X3 169 aa9.37□□□□□ -0.91
MSH6-213ENST00000614496 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
MSH6-213ENST00000614496 CFHR3Q02985 330 aa9.37□□□□□ -0.91
MSH6-213ENST00000614496 ABCA2Q9BZC7 2435 aa9.36□□□□□ -0.91
MSH6-213ENST00000614496 GPHB5Q86YW7 130 aa9.36□□□□□ -0.91
MSH6-213ENST00000614496 SLC25A29Q8N8R3 303 aa9.36□□□□□ -0.91
MSH6-213ENST00000614496 DMXL1Q9Y485 3027 aa9.36□□□□□ -0.91
MSH6-213ENST00000614496 PRIMA1Q86XR5 153 aa9.36□□□□□ -0.91
MSH6-213ENST00000614496 H3BMM0 161 aa9.36□□□□□ -0.91
MSH6-213ENST00000614496 POLR2KP53803 58 aaKnown RBP9.36□□□□□ -0.91
MSH6-213ENST00000614496 UBE2WQ96B02 151 aa9.36□□□□□ -0.91
MSH6-213ENST00000614496 LRBAP50851 2863 aa9.36□□□□□ -0.91
MSH6-213ENST00000614496 K7EMT4 169 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 ATMQ13315 3056 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 IGHV3-30-3P0DP02 117 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 TSPEAR-AS2P59090 65 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 LRRK2Q5S007 2527 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 GAGE12JA6NER3 117 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 A8MZ25 164 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 M0QY20 66 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 SCGB1A1P11684 91 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 GAGE4Q13068 117 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 GAGE5Q13069 117 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 TMEM101Q96IK0 257 aa9.35□□□□□ -0.91
MSH6-213ENST00000614496 TRAV26-1A0A087WT03 109 aa9.34□□□□□ -0.91
MSH6-213ENST00000614496 INSP01308 110 aa9.34□□□□□ -0.91
MSH6-213ENST00000614496 ZNF22P17026 224 aaPredicted RBP9.34□□□□□ -0.91
MSH6-213ENST00000614496 CFAP126Q5VTH2 177 aa9.34□□□□□ -0.91
MSH6-213ENST00000614496 LINC01620Q4KN68 170 aa9.34□□□□□ -0.91
MSH6-213ENST00000614496 IGIPA6NJ69 53 aa9.34□□□□□ -0.91
MSH6-213ENST00000614496 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
MSH6-213ENST00000614496 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
MSH6-213ENST00000614496 KLLNB2CW77 178 aa9.33□□□□□ -0.92
MSH6-213ENST00000614496 CRYBA4P53673 196 aa9.33□□□□□ -0.92
MSH6-213ENST00000614496 C11orf68Q9H3H3 251 aaKnown RBP9.33□□□□□ -0.92
MSH6-213ENST00000614496 IGHV3-30P01768 117 aa9.33□□□□□ -0.92
MSH6-213ENST00000614496 IGHV3-30-5P0DP03 117 aa9.33□□□□□ -0.92
MSH6-213ENST00000614496 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
MSH6-213ENST00000614496 IGLV4-69A0A075B6H9 119 aa9.33□□□□□ -0.92
MSH6-213ENST00000614496 DNAL4O96015 105 aa9.33□□□□□ -0.92
MSH6-213ENST00000614496 AVPP01185 164 aa9.33□□□□□ -0.92
MSH6-213ENST00000614496 Q6ZUT4 128 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms