RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 FHL2Q14192 279 aa12.41□□□□□ -0.42
SREK1-216ENST00000612404 MAP1LC3AQ9H492 121 aa12.41□□□□□ -0.42
SREK1-216ENST00000612404 ATP5G1P05496 136 aa12.4□□□□□ -0.42
SREK1-216ENST00000612404 Q0VG73 95 aa12.4□□□□□ -0.42
SREK1-216ENST00000612404 C12orf74Q32Q52 190 aa12.4□□□□□ -0.42
SREK1-216ENST00000612404 SLC25A29Q8N8R3 303 aa12.4□□□□□ -0.42
SREK1-216ENST00000612404 HTN3P15516 51 aa12.4□□□□□ -0.43
SREK1-216ENST00000612404 C11orf45Q8TAV5 145 aa12.4□□□□□ -0.43
SREK1-216ENST00000612404 NIT2Q9NQR4 276 aa12.4□□□□□ -0.43
SREK1-216ENST00000612404 K7EQD1 137 aa12.39□□□□□ -0.43
SREK1-216ENST00000612404 HOXA5P20719 270 aa12.39□□□□□ -0.43
SREK1-216ENST00000612404 EDA2RQ9HAV5 297 aa12.39□□□□□ -0.43
SREK1-216ENST00000612404 Q9UF83 564 aa12.39□□□□□ -0.43
SREK1-216ENST00000612404 SUMO2P61956 95 aaKnown RBP12.38□□□□□ -0.43
SREK1-216ENST00000612404 PRSS3P2Q8NHM4 247 aa12.38□□□□□ -0.43
SREK1-216ENST00000612404 ST20Q9HBF5 79 aa12.38□□□□□ -0.43
SREK1-216ENST00000612404 HHLA3Q9XRX5 114 aa12.38□□□□□ -0.43
SREK1-216ENST00000612404 NHLRC4P0CG21 123 aaPredicted RBP12.38□□□□□ -0.43
SREK1-216ENST00000612404 IFI27P40305 119 aaPredicted RBP12.38□□□□□ -0.43
SREK1-216ENST00000612404 TRBV6-4A0A1B0GX49 114 aa12.37□□□□□ -0.43
SREK1-216ENST00000612404 NANOS2P60321 138 aaKnown RBP12.37□□□□□ -0.43
SREK1-216ENST00000612404 C20orf78Q9BR46 151 aa12.37□□□□□ -0.43
SREK1-216ENST00000612404 TNFRSF18Q9Y5U5 241 aa12.37□□□□□ -0.43
SREK1-216ENST00000612404 F5H768 121 aa12.37□□□□□ -0.43
SREK1-216ENST00000612404 SERF1AO75920 110 aa12.37□□□□□ -0.43
SREK1-216ENST00000612404 RNASEKQ6P5S7 137 aaKnown RBP12.37□□□□□ -0.43
SREK1-216ENST00000612404 Q6ZTC4 211 aa12.37□□□□□ -0.43
SREK1-216ENST00000612404 NIT1Q86X76 327 aa12.37□□□□□ -0.43
SREK1-216ENST00000612404 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
SREK1-216ENST00000612404 SDHAF1A6NFY7 115 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 PMCHP20382 165 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 SNRPEP62304 92 aaKnown RBP12.35□□□□□ -0.43
SREK1-216ENST00000612404 RHOHQ15669 191 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 PRO0255Q9UI72 69 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 FBN3Q75N90 2809 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 TRBV6-5A0A0K0K1A5 114 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 FA2HQ7L5A8 372 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 NEGR1Q7Z3B1 354 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 PRADC1Q9BSG0 188 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 TMEM70Q9BUB7 260 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 SMIM2Q9BVW6 85 aa12.35□□□□□ -0.43
SREK1-216ENST00000612404 TRBV10-1A0A0K0K1A3 114 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 LOC100131303A0A0U1RQF7 123 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 LINC00614P0C842 121 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 CRYBA4P53673 196 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 ZNRF2Q8NHG8 242 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 DNAJC30Q96LL9 226 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 NXT2Q9NPJ8 142 aaKnown RBP12.34□□□□□ -0.43
SREK1-216ENST00000612404 GAGE12JA6NER3 117 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 PRSS47A8MTI9 375 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 LINC00310P59036 64 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 RPL36AP83881 106 aaKnown RBP12.34□□□□□ -0.43
SREK1-216ENST00000612404 GAGE1Q13065 139 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 GAGE4Q13068 117 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 GAGE5Q13069 117 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 GAGE13Q4V321 117 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 COA6Q5JTJ3 125 aaKnown RBP12.34□□□□□ -0.43
SREK1-216ENST00000612404 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 RPL36ALQ969Q0 106 aaKnown RBP12.34□□□□□ -0.43
SREK1-216ENST00000612404 URB1-AS1Q96HZ7 61 aa12.34□□□□□ -0.43
SREK1-216ENST00000612404 A0A0J9YY99 117 aa12.33□□□□□ -0.44
SREK1-216ENST00000612404 PAX4O43316 350 aa12.33□□□□□ -0.44
SREK1-216ENST00000612404 NUPR1O60356 82 aa12.33□□□□□ -0.44
SREK1-216ENST00000612404 PDZD11Q5EBL8 140 aa12.33□□□□□ -0.44
SREK1-216ENST00000612404 Q8N8P6 123 aa12.33□□□□□ -0.44
SREK1-216ENST00000612404 TRBV7-3A0A075B6L6 115 aa12.32□□□□□ -0.44
SREK1-216ENST00000612404 POLR2KP53803 58 aaKnown RBP12.32□□□□□ -0.44
SREK1-216ENST00000612404 IGLV2-18A0A075B6J9 118 aa12.32□□□□□ -0.44
SREK1-216ENST00000612404 TRAV26-1A0A087WT03 109 aa12.32□□□□□ -0.44
SREK1-216ENST00000612404 VCYO14598 125 aa12.32□□□□□ -0.44
SREK1-216ENST00000612404 AP5S1Q9NUS5 200 aa12.32□□□□□ -0.44
SREK1-216ENST00000612404 TCAPO15273 167 aa12.31□□□□□ -0.44
SREK1-216ENST00000612404 GYPEP15421 78 aa12.31□□□□□ -0.44
SREK1-216ENST00000612404 CHCHD1Q96BP2 118 aaKnown RBP12.31□□□□□ -0.44
SREK1-216ENST00000612404 C5orf52A6NGY3 159 aa12.31□□□□□ -0.44
SREK1-216ENST00000612404 HSBP1O75506 76 aa12.31□□□□□ -0.44
SREK1-216ENST00000612404 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
SREK1-216ENST00000612404 IGHV3-38A0A0C4DH36 116 aa12.3□□□□□ -0.44
SREK1-216ENST00000612404 TRBV27A0A0K0K1C4 114 aa12.3□□□□□ -0.44
SREK1-216ENST00000612404 RPL32P62910 135 aaKnown RBP12.3□□□□□ -0.44
SREK1-216ENST00000612404 KIR2DL4Q99706 377 aa12.3□□□□□ -0.44
SREK1-216ENST00000612404 PMCHL1Q16048 86 aa12.29□□□□□ -0.44
SREK1-216ENST00000612404 VSIG2Q96IQ7 327 aa12.29□□□□□ -0.44
SREK1-216ENST00000612404 DEFB131BA0A096LNP1 70 aa12.29□□□□□ -0.44
SREK1-216ENST00000612404 I3L3M4 83 aa12.29□□□□□ -0.44
SREK1-216ENST00000612404 FCER1GP30273 86 aa12.28□□□□□ -0.44
SREK1-216ENST00000612404 UBE2D3P61077 147 aa12.28□□□□□ -0.44
SREK1-216ENST00000612404 UBE2D2P62837 147 aa12.28□□□□□ -0.44
SREK1-216ENST00000612404 FAM19A2Q8N3H0 131 aa12.28□□□□□ -0.44
SREK1-216ENST00000612404 LAGE3Q14657 143 aa12.28□□□□□ -0.44
SREK1-216ENST00000612404 HIST3H2BBQ8N257 126 aa12.28□□□□□ -0.44
SREK1-216ENST00000612404 ESDP10768 282 aa12.27□□□□□ -0.45
SREK1-216ENST00000612404 S100A2P29034 98 aa12.27□□□□□ -0.45
SREK1-216ENST00000612404 TRAV10A0A0B4J240 114 aa12.26□□□□□ -0.45
SREK1-216ENST00000612404 IGHV1-24A0A0C4DH33 117 aa12.26□□□□□ -0.45
SREK1-216ENST00000612404 LINC01546A6NGU7 62 aa12.26□□□□□ -0.45
SREK1-216ENST00000612404 TSHBP01222 138 aa12.26□□□□□ -0.45
SREK1-216ENST00000612404 AMTP48728 403 aa12.26□□□□□ -0.45
SREK1-216ENST00000612404 DAZ4Q86SG3 579 aaKnown RBP12.26□□□□□ -0.45
SREK1-216ENST00000612404 DAZ3Q9NR90 486 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms